LINC01002

General Information

Gene Name       : LINC01002
Gene ID             : ENSG00000282508.1
Essential Gene : No

Functions

Localization

Domains (AlphaFold: LINC01002)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878LINC01002ENSG00000282508.135.7029.2332.47ENCSR000AEF
HepG2LINC01002ENSG00000282508.135.8131.2633.54ENCSR985KAT
K562LINC01002ENSG00000282508.181.69100.9691.32ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for LINC01002 is not avaliable on ENCORE database.



Proteins bound to RNA
  • LINC01002 RNA is bound by 2 proteins.  







eCLIP assay for LINC01002 is not avaliable on ENCORE database.





2 proteins are bound to LINC01002 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr19200339200398-intron-Distal,intron-Proximal3.433425.23756K562AGGF1
chr19200345200378-intron-Distal,intron-Proximal3.386476.90099K562ILF3
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for LINC01002 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for LINC01002 is not available on ENCORE database.

  • 98 RBPs can affect the levels of LINC01002.  








The Knockdown/knockout RNA-Seq assay for LINC01002 is not available on ENCORE database.





98 RBPs can affect the gene expression of LINC01002 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
LINC01002ENSG00000206082.8148.7227086.340400.784403.122002.06770HepG2ADAR
LINC01002ENSG00000206082.8179.4410089.360901.005702.629501.71850HepG2BCCIP
LINC01002ENSG00000206082.8300.61300211.328200.508302.828101.58100HepG2BUD13
LINC01002ENSG00000206082.8489.65490331.718200.561702.906601.90660HepG2CCAR1
LINC01002ENSG00000206082.8302.90330204.705500.565202.700602.02030HepG2CPSF6
LINC01002ENSG00000206082.8226.07500165.246900.452102.066001.41180HepG2DAZAP1
LINC01002ENSG00000206082.8177.5074083.846401.082002.633301.67500HepG2DHX30
LINC01002ENSG00000206082.8162.4889086.922700.902402.666001.97240HepG2DNAJC21
LINC01002ENSG00000206082.8174.0224086.196001.013506.204005.28370HepG2DNAJC2
LINC01002ENSG00000206082.8413.97940120.918501.7754014.4051013.12180HepG2EIF2S1
LINC01002ENSG00000206082.8219.78940133.585000.718302.851802.20370HepG2EIF4A3
LINC01002ENSG00000206082.8424.67540205.083901.050002.336001.40950HepG2FTO
LINC01002ENSG00000206082.8218.5161098.067801.155807.011405.79670HepG2FUBP3
LINC01002ENSG00000206082.8274.25450134.915301.023406.354505.33010HepG2FXR1
LINC01002ENSG00000206082.8223.31430125.083500.836103.769502.99680HepG2G3BP1
LINC01002ENSG00000206082.8382.04170232.013400.719404.103903.33640HepG2GPKOW
LINC01002ENSG00000206082.8192.95450103.946500.892303.979902.31600HepG2HNRNPA0
LINC01002ENSG00000206082.8179.7715087.755901.034504.812303.99230HepG2HNRNPA1
LINC01002ENSG00000206082.8245.52800114.246401.103608.396507.23550HepG2HNRNPF
LINC01002ENSG00000206082.8296.90400126.822501.227108.994007.79060HepG2HNRNPK
LINC01002ENSG00000206082.8255.72620150.533800.764405.287404.38120HepG2HNRNPL
LINC01002ENSG00000206082.8351.98990221.418000.668703.733403.01200HepG2HNRNPLL
LINC01002ENSG00000206082.8152.5394096.979300.653302.032801.50350HepG2HNRNPU
LINC01002ENSG00000206082.8183.5146017.636803.3791012.209108.33270HepG2HNRNPUL1
LINC01002ENSG00000206082.8205.18160112.497700.866904.520403.61500HepG2IGF2BP1
LINC01002ENSG00000206082.8154.8186099.058800.644102.143501.48910HepG2ILF2
LINC01002ENSG00000206082.8283.02990127.907401.145806.752005.11000HepG2KHSRP
LINC01002ENSG00000206082.8138.69440230.52490-0.733003.396402.50290HepG2MSI2
LINC01002ENSG00000206082.8435.08120225.896700.945505.411504.02830HepG2MTPAP
LINC01002ENSG00000206082.8342.51650138.875401.302305.502804.62420HepG2NCBP2
LINC01002ENSG00000206082.8372.34610196.355700.923106.521005.39750HepG2NSUN2
LINC01002ENSG00000206082.8270.11840123.596401.127905.293604.30490HepG2PABPC4
LINC01002ENSG00000206082.8227.14050142.808500.669403.339702.68650HepG2PCBP1
LINC01002ENSG00000206082.8177.5567086.495401.037503.151502.36980HepG2PPIL4
LINC01002ENSG00000206082.8227.62120145.338200.647103.564502.96050HepG2PTBP1
LINC01002ENSG00000206082.8306.63050157.351000.962404.315203.56030HepG2QKI
LINC01002ENSG00000206082.851.20230108.94840-1.089402.915302.19330HepG2RAVER1
LINC01002ENSG00000206082.8373.54260488.61910-0.387402.251901.46810HepG2RBM15
LINC01002ENSG00000206082.8203.0573019.329703.3929013.194909.61250HepG2RBM17
LINC01002ENSG00000206082.8160.84240242.62820-0.593102.999402.46610HepG2RBM22
LINC01002ENSG00000206082.8260.79870142.826500.868604.858403.98730HepG2RBM25
LINC01002ENSG00000206082.8137.7062016.943603.022709.758306.71700HepG2RBM39
LINC01002ENSG00000206082.8150.5963083.916100.843602.366501.38820HepG2RCC2
LINC01002ENSG00000206082.8257.61210150.664400.773805.138004.33210HepG2RECQL
LINC01002ENSG00000206082.8233.86410123.408500.922104.556603.53140HepG2RPS3A
LINC01002ENSG00000206082.8192.8106086.356401.158707.284106.30990HepG2SAFB2
LINC01002ENSG00000206082.8177.6518018.657703.251106.208604.04220HepG2SF1
LINC01002ENSG00000206082.8367.65800219.139100.746402.759702.05380HepG2SF3B1
LINC01002ENSG00000206082.8228.94810151.270500.597801.937401.42800HepG2SF3B4
LINC01002ENSG00000206082.8252.40560149.958800.751104.944004.04830HepG2SLBP
LINC01002ENSG00000206082.8272.5681016.703104.0283014.1093010.90120HepG2SNRNP200
LINC01002ENSG00000206082.885.42790157.91220-0.886302.585502.12420HepG2SRSF1
LINC01002ENSG00000206082.8347.86440215.910000.688002.068001.42860HepG2TARDBP
LINC01002ENSG00000206082.8211.88350130.414000.700103.479002.54590HepG2TIA1
LINC01002ENSG00000206082.8152.8307094.182700.698301.827401.40290HepG2TIAL1
LINC01002ENSG00000206082.8142.71390243.62740-0.771503.798003.06640HepG2U2AF1
LINC01002ENSG00000206082.8183.9544019.391603.245707.248805.57350HepG2U2AF2
LINC01002ENSG00000206082.8113.1633051.645801.131603.824602.93330HepG2UCHL5
LINC01002ENSG00000206082.8210.9081080.018201.398105.589304.12490HepG2UPF2
LINC01002ENSG00000206082.8195.41570110.544000.821803.699502.42700HepG2XPO5
LINC01002ENSG00000206082.8240.6483086.090501.482905.976704.92250HepG2XRN2
LINC01002ENSG00000206082.8536.70920398.381700.429903.961703.33880HepG2ZNF622
LINC01002ENSG00000206082.82253.253601791.921500.330403.724103.08380K562AGGF1
LINC01002ENSG00000206082.83200.946301864.614900.779504.979804.09270K562AKAP8L
LINC01002ENSG00000206082.8808.93380526.967300.618203.457501.95150K562BCCIP
LINC01002ENSG00000206082.81048.31190509.298901.0414012.9337010.81870K562BCLAF1
LINC01002ENSG00000206082.81887.330301059.678000.832603.955002.64620K562CCAR1
LINC01002ENSG00000206082.82808.677402141.316500.391303.088401.83210K562CCDC124
LINC01002ENSG00000206082.81184.13060645.844100.874506.869804.91430K562CIRBP
LINC01002ENSG00000206082.8612.09500386.379300.663606.413304.70560K562CSTF2
LINC01002ENSG00000206082.8932.718002115.12740-1.1812013.4616012.13380K562DDX47
LINC01002ENSG00000206082.8685.98230431.788500.667702.369201.52610K562EFTUD2
LINC01002ENSG00000206082.81536.757901155.915600.410806.081604.26350K562EIF2S1
LINC01002ENSG00000206082.81031.18150611.873400.752905.942304.94810K562EIF2S2
LINC01002ENSG00000206082.81203.14350959.698700.326102.912501.58140K562EWSR1
LINC01002ENSG00000206082.8477.715201143.36640-1.2591032.7833030.83100K562FXR1
LINC01002ENSG00000206082.831.68290266.24020-3.0710023.0281020.37830K562G3BP2
LINC01002ENSG00000206082.81275.49590858.809200.570502.940302.32740K562HNRNPC
LINC01002ENSG00000206082.81267.65630767.256400.724305.546303.85590K562HNRNPF
LINC01002ENSG00000206082.8255.92010675.12130-1.399507.748306.06760K562HNRNPM
LINC01002ENSG00000206082.8515.232701113.03550-1.111206.230905.04810K562HSPD1
LINC01002ENSG00000206082.81362.05090603.077701.175304.007102.67900K562IGF2BP2
LINC01002ENSG00000206082.81043.56990613.214600.767007.775605.64990K562IGF2BP3
LINC01002ENSG00000206082.82498.493401978.684400.336403.858002.86080K562KIF1C
LINC01002ENSG00000206082.81278.80510766.566100.738207.290404.73720K562LSM11
LINC01002ENSG00000206082.82277.186801894.199900.265602.426501.44210K562MAK16
LINC01002ENSG00000206082.81584.51960846.100400.905005.607303.30870K562NUSAP1
LINC01002ENSG00000206082.81242.96830838.724900.567403.967402.21630K562PHF6
LINC01002ENSG00000206082.81706.652401006.747900.761409.394506.47320K562PKM
LINC01002ENSG00000206082.81908.65580770.106601.3093031.9436028.48610K562PSIP1
LINC01002ENSG00000206082.8774.826701488.95360-0.942402.939002.09770K562PUF60
LINC01002ENSG00000206082.82449.439701848.904900.405702.268601.76720K562PUS1
LINC01002ENSG00000206082.8478.95960297.711200.685906.291403.51380K562QKI
LINC01002ENSG00000206082.82310.366201801.712600.358703.763203.08740K562RBM15
LINC01002ENSG00000206082.8913.72580575.127500.667802.715201.35380K562RBM34
LINC01002ENSG00000206082.81287.13140703.076500.8723012.5137010.39990K562RCC2
LINC01002ENSG00000206082.8408.04330270.043500.595403.916501.82870K562RECQL
LINC01002ENSG00000206082.8556.27780928.91830-0.739703.223102.05270K562SAFB
LINC01002ENSG00000206082.81599.683101897.96230-0.246702.530701.74860K562SF3A3
LINC01002ENSG00000206082.8399.54060276.630600.530303.694002.70180K562SF3B4
LINC01002ENSG00000206082.81217.20580666.450700.8689012.398309.82050K562SRFBP1
LINC01002ENSG00000206082.8923.92040633.163400.545105.219803.69310K562SRSF4
LINC01002ENSG00000206082.8989.42890569.909400.795809.944707.80230K562SRSF5
LINC01002ENSG00000206082.8414.382201045.48010-1.335107.085505.75510K562SYNCRIP
LINC01002ENSG00000206082.81057.01750588.892300.8438010.592908.87190K562TIA1
LINC01002ENSG00000206082.81197.57580578.157601.050509.264906.92190K562TRA2A
LINC01002ENSG00000206082.81310.94440787.360700.735408.398606.54890K562TRIM56
LINC01002ENSG00000206082.8138.94430266.36500-0.938905.359304.24660K562U2AF2
LINC01002ENSG00000206082.8784.83570430.367800.866703.028401.95710K562UCHL5
LINC01002ENSG00000206082.81682.877802039.64270-0.277403.458502.66110K562UPF1
LINC01002ENSG00000206082.81136.833201814.78670-0.6748018.3752016.47130K562WDR43
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for LINC01002 is not available on ENCORE database.






No RBPs affect the alternative splcing events of LINC01002 on ENCORE database.





The Knockdown/knockout RNA-Seq assay for LINC01002 is not avaliable on ENCORE database.