HOMER2

General Information

Gene Name       : HOMER2
Gene ID             : ENSG00000103942.12
Essential Gene : No

Functions

Localization

Domains (AlphaFold: HOMER2)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878HOMER2ENSG00000103942.120.700.900.80ENCSR000AEF
HepG2HOMER2ENSG00000103942.1224.1620.9122.54ENCSR985KAT
K562HOMER2ENSG00000103942.120.220.290.26ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for HOMER2 is not avaliable on ENCORE database.



Proteins bound to RNA
  • HOMER2 RNA is bound by 4 proteins.  







eCLIP assay for HOMER2 is not avaliable on ENCORE database.





4 proteins are bound to HOMER2 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr158351990583519979-CDS,intron-Distal,intron-Proximal4.422593.89826HepG2BCLAF1
chr158352088983520964-CDS,intron-Distal,intron-Proximal4.533783.89826HepG2BCLAF1
chr158360317983603271-intron-Distal4.095447.41476HepG2RBFOX2
chr158363347483633525-intron-Distal3.475985.39438HepG2HNRNPC
chr158352966483529751-intron-Distal5.285325.75114HepG2PTBP1
chr158360306883603179-intron-Distal4.589536.07369HepG2RBFOX2
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for HOMER2 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for HOMER2 is not available on ENCORE database.

  • 93 RBPs can affect the levels of HOMER2.  








The Knockdown/knockout RNA-Seq assay for HOMER2 is not available on ENCORE database.





93 RBPs can affect the gene expression of HOMER2 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
HOMER2ENSG00000103942.8634.80140460.867100.461903.187402.04590HepG2AATF
HOMER2ENSG00000103942.8395.93610535.02230-0.434302.157101.32290HepG2ABCF1
HOMER2ENSG00000103942.8700.51410426.808800.7147010.564309.53670HepG2ACO1
HOMER2ENSG00000103942.8381.37090579.20950-0.602903.584102.98910HepG2AKAP1
HOMER2ENSG00000103942.8706.64730428.784700.7206010.099908.74670HepG2AKAP8L
HOMER2ENSG00000103942.8772.79770479.247900.689205.973104.84060HepG2ASCC1
HOMER2ENSG00000103942.8191.21510391.55430-1.034007.307205.74390HepG2BCCIP
HOMER2ENSG00000103942.8130.58600408.09220-1.6439019.2992017.93080HepG2BOP1
HOMER2ENSG00000103942.8348.62580460.29730-0.400902.328901.61690HepG2CALR
HOMER2ENSG00000103942.8534.68100883.27410-0.724205.534304.13270HepG2CCAR1
HOMER2ENSG00000103942.8270.985301072.16920-1.9842026.9012024.60950HepG2CNOT7
HOMER2ENSG00000103942.8261.05530391.58500-0.585004.363603.08690HepG2YBX3
HOMER2ENSG00000103942.8368.75020241.852800.608403.695802.46770HepG2CSTF2
HOMER2ENSG00000103942.81347.59560561.353001.2633036.8457035.04360HepG2CELF1
HOMER2ENSG00000103942.8466.02640603.69800-0.373403.124402.34420HepG2DAZAP1
HOMER2ENSG00000103942.8216.06880508.48950-1.2347015.0880013.65320HepG2DDX21
HOMER2ENSG00000103942.8373.76070497.58500-0.412802.585301.70490HepG2DDX24
HOMER2ENSG00000103942.8141.85560291.63270-1.039707.314905.22140HepG2DDX28
HOMER2ENSG00000103942.8382.58830554.84040-0.536303.271402.59850HepG2DDX3X
HOMER2ENSG00000103942.81005.52570425.447701.2408010.293008.48630HepG2DDX59
HOMER2ENSG00000103942.8300.90280426.19210-0.502202.919601.88260HepG2DDX5
HOMER2ENSG00000103942.8822.28180476.615800.786706.754305.82330HepG2DDX6
HOMER2ENSG00000103942.8207.49280370.85010-0.837806.617305.15150HepG2DHX30
HOMER2ENSG00000103942.8210.71590408.33130-0.9544010.181609.04660HepG2DKC1
HOMER2ENSG00000103942.8485.56720381.116800.349302.723302.07580HepG2DNAJC2
HOMER2ENSG00000103942.8366.07670480.17890-0.391402.427101.41470HepG2EIF3G
HOMER2ENSG00000103942.8298.17830506.35100-0.764005.425204.53130HepG2EIF4A3
HOMER2ENSG00000103942.8701.70980493.000500.509202.627601.95600HepG2EIF4B
HOMER2ENSG00000103942.8433.59720570.46160-0.395802.478001.70610HepG2EIF4G2
HOMER2ENSG00000103942.8797.45130540.251600.561703.468002.61290HepG2FIP1L1
HOMER2ENSG00000103942.8204.50310375.28750-0.875903.003101.94320HepG2FTO
HOMER2ENSG00000103942.8702.51410473.920400.567804.015303.22180HepG2G3BP1
HOMER2ENSG00000103942.8677.60310424.715800.673805.124904.27130HepG2GPKOW
HOMER2ENSG00000103942.8632.09550992.61970-0.651104.306802.92020HepG2GRSF1
HOMER2ENSG00000103942.8452.24340907.17660-1.004309.311006.72450HepG2HNRNPA0
HOMER2ENSG00000103942.8285.33470388.18010-0.444102.280101.68840HepG2HNRNPA1
HOMER2ENSG00000103942.8191.94210431.78380-1.1696011.292209.97030HepG2HNRNPC
HOMER2ENSG00000103942.8612.26270928.74710-0.601104.047202.21020HepG2HNRNPD
HOMER2ENSG00000103942.8667.73630525.141500.346503.140702.38000HepG2HNRNPF
HOMER2ENSG00000103942.8715.27930549.954800.379103.468002.72120HepG2HNRNPL
HOMER2ENSG00000103942.8191.02550405.31290-1.085309.018407.95420HepG2HNRNPLL
HOMER2ENSG00000103942.8465.63950794.88940-0.771506.195504.37870HepG2HSPD1
HOMER2ENSG00000103942.8624.433601022.17800-0.711005.943604.09620HepG2KHDRBS1
HOMER2ENSG00000103942.8655.82870484.537000.436602.195501.31480HepG2KHSRP
HOMER2ENSG00000103942.8234.11920495.86760-1.0827010.967208.69950HepG2LIN28B
HOMER2ENSG00000103942.8248.81770511.06010-1.038409.639508.43330HepG2MAGOH
HOMER2ENSG00000103942.8480.29660753.19170-0.649104.105102.37110HepG2NKRF
HOMER2ENSG00000103942.8482.71070598.62010-0.310502.214001.53140HepG2NOL12
HOMER2ENSG00000103942.8557.11680353.527300.656102.820101.71710HepG2NONO
HOMER2ENSG00000103942.8587.17280461.187800.348302.737602.13310HepG2PCBP1
HOMER2ENSG00000103942.8586.85720422.259400.474804.527503.56220HepG2PRPF4
HOMER2ENSG00000103942.8470.91430296.968400.665104.248503.27100HepG2PRPF8
HOMER2ENSG00000103942.8752.78030469.297700.681609.006308.13310HepG2PTBP1
HOMER2ENSG00000103942.8975.86420606.116500.687008.677907.52060HepG2PUM2
HOMER2ENSG00000103942.81053.13410563.436200.902306.053305.03750HepG2RAVER1
HOMER2ENSG00000103942.8780.05980613.251700.347002.596201.76360HepG2RBM15
HOMER2ENSG00000103942.8445.89190628.44490-0.495103.977003.38490HepG2RBM22
HOMER2ENSG00000103942.8712.41670461.254800.627106.263305.28490HepG2RBM25
HOMER2ENSG00000103942.8726.493501035.71200-0.511603.020901.40870HepG2RBM47
HOMER2ENSG00000103942.8222.89810462.33390-1.052607.492505.76200HepG2RCC2
HOMER2ENSG00000103942.8645.58360522.265100.305702.168001.67710HepG2NELFE
HOMER2ENSG00000103942.8775.84650486.452000.673409.194808.17030HepG2RECQL
HOMER2ENSG00000103942.8860.94680565.627700.606006.177405.21380HepG2RPLP0
HOMER2ENSG00000103942.8263.28090398.33490-0.597403.955903.23380HepG2RPS19
HOMER2ENSG00000103942.8418.653901077.15030-1.3634016.3052014.42980HepG2RPS3A
HOMER2ENSG00000103942.8445.19640293.761900.599703.255402.41190HepG2RRP9
HOMER2ENSG00000103942.8512.749601014.30990-0.9842010.308607.94770HepG2SART3
HOMER2ENSG00000103942.8671.693801022.94760-0.606903.458701.72150HepG2SBDS
HOMER2ENSG00000103942.8801.12900475.631300.752105.800804.80180HepG2SF3A3
HOMER2ENSG00000103942.8811.35040488.560200.7317010.776309.72810HepG2SF3B4
HOMER2ENSG00000103942.8357.71550574.83110-0.684304.384903.16150HepG2SMNDC1
HOMER2ENSG00000103942.8242.80360446.38890-0.878503.518102.63220HepG2SNRNP70
HOMER2ENSG00000103942.81764.39310709.822601.3135054.3136052.82930HepG2SRFBP1
HOMER2ENSG00000103942.8408.82170509.96710-0.318901.897501.48480HepG2SRSF1
HOMER2ENSG00000103942.8630.92320515.916100.290202.345201.70030HepG2SRSF7
HOMER2ENSG00000103942.81337.17030414.899201.6883070.6042068.59620HepG2SRSF9
HOMER2ENSG00000103942.81477.25840937.183800.656405.508303.90390HepG2STIP1
HOMER2ENSG00000103942.81134.02500801.772600.500103.212901.77920HepG2SUGP2
HOMER2ENSG00000103942.8213.22500364.83210-0.774905.622704.30620HepG2SUPT6H
HOMER2ENSG00000103942.81136.14660383.239501.5677024.3174022.67040HepG2SUPV3L1
HOMER2ENSG00000103942.8948.80530458.422901.0493020.8879019.54620HepG2TAF15
HOMER2ENSG00000103942.8407.46870777.70070-0.932504.710703.34990HepG2TBRG4
HOMER2ENSG00000103942.8609.22550421.180900.532404.701703.62060HepG2TIA1
HOMER2ENSG00000103942.8680.04090416.764900.706308.187707.41100HepG2TIAL1
HOMER2ENSG00000103942.8330.85300420.51140-0.346002.290801.76810HepG2TRIM56
HOMER2ENSG00000103942.8348.19440462.16900-0.408502.196501.63020HepG2U2AF1
HOMER2ENSG00000103942.8204.89770350.91930-0.776203.702502.52580HepG2UPF2
HOMER2ENSG00000103942.8332.82860433.55670-0.381402.443901.44810HepG2UTP18
HOMER2ENSG00000103942.8463.35620964.83570-1.0582010.168008.11030HepG2XPO5
HOMER2ENSG00000103942.8443.95400619.69240-0.481102.372901.39200HepG2XRCC6
HOMER2ENSG00000103942.8655.41760463.912400.498505.883305.16380HepG2ZNF622
HOMER2ENSG00000103942.835.724905.140502.796804.642303.56550K562PCBP3
HOMER2ENSG00000103942.820.279703.943002.362602.656201.87330K562POLR2G
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for HOMER2 is not available on ENCORE database.






No RBPs affect the alternative splcing events of HOMER2 on ENCORE database.





The Knockdown/knockout RNA-Seq assay for HOMER2 is not avaliable on ENCORE database.