GRAP2

General Information

Gene Name       : GRAP2
Gene ID             : ENSG00000100351.16
Essential Gene : No

Functions

Localization

Domains (AlphaFold: GRAP2)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878GRAP2ENSG00000100351.1618.9825.5122.25ENCSR000AEF
HepG2GRAP2ENSG00000100351.160.000.120.06ENCSR985KAT
K562GRAP2ENSG00000100351.1650.1845.4447.81ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for GRAP2 is not avaliable on ENCORE database.



Proteins bound to RNA
  • GRAP2 RNA is bound by 18 proteins.  







eCLIP assay for GRAP2 is not avaliable on ENCORE database.





18 proteins are bound to GRAP2 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr224036835640368402+3'-UTR4.182094.39969K562TARDBP
chr224036846440368567+3'-UTR5.9364617.27478K562TARDBP
chr224036733440367430+3'-UTR4.3520912.42779K562FAM120A
chr224036842740368464+3'-UTR4.029663.34609K562TARDBP
chr224036898240369061+3'-UTR6.5146716.07924K562UPF1
chr224036734940367430+3'-UTR4.1166215.06371K562UPF1
chr224035600440356065+3'-UTR,CDS,intron-Distal,intron-Proximal4.8696510.00853K562SF3B4
chr224036891740368982+3'-UTR6.1818816.07924K562UPF1
chr224036918740369222+3'-UTR5.045376.42091K562UPF1
chr224034307740343141+3'-UTR,5'-UTR,CDS,intron-Distal,intron-Proximal4.117073.89948K562YBX3
chr224036851340368565+3'-UTR4.2236810.50859K562UPF1
chr224036776240367793+3'-UTR3.685434.82552K562UPF1
chr224036893440369037+3'-UTR3.406453.30889K562GTF2F1
chr224036757040367659+3'-UTR5.8576214.04767K562UPF1
chr224036890540369045+3'-UTR3.937633.96485K562AKAP8L
chr224036878740368842+3'-UTR3.857516.76837K562UPF1
chr224034315940343198+5'-UTR,CDS,intron-Distal,intron-Proximal3.344186.16312K562AQR
chr224034314840343231+5'-UTR,CDS,intron-Distal,intron-Proximal4.1638811.32195K562PRPF8
chr224035182440351911+CDS,intron-Distal3.256503.71253K562LIN28B
chr224036539640365462+CDS,intron-Proximal3.103373.89662K562BUD13
chr224035176540351852+CDS,intron-Distal,intron-Proximal4.435279.23765K562SF3B4
chr224036448140364617+intron-Distal3.067425.09410K562GTF2F1
chr224034614140346206+intron-Distal3.966863.11802K562HNRNPK
chr224034319840343253+intron-Distal,intron-Proximal3.860597.30031K562AQR
chr224036455340364578+intron-Distal5.1781510.53026K562HNRNPL
chr224036448940364601+intron-Distal4.1891218.27798K562AGGF1
chr224036445540364553+intron-Distal3.4800010.98898K562HNRNPL
chr224035454540354635+intron-Distal4.463035.08344K562TARDBP
chr224034947040349550+intron-Distal4.652235.32928K562MATR3
chr224035447240354541+intron-Distal5.4314410.12625K562CPSF6
chr224036457840364631+intron-Distal5.4443312.79712K562HNRNPL
chr224034496640345024+intron-Distal3.732123.06617K562HNRNPK
chr224034997840350082+intron-Distal3.688684.92145K562HNRNPL
chr224034482040345051+intron-Distal5.7728513.55247K562MATR3
chr224034323140343288+intron-Distal,intron-Proximal4.515955.17894K562PRPF8
chr224035441940354472+intron-Distal3.897954.44481K562CPSF6
chr224034491040345022+intron-Distal4.639017.96448K562PTBP1
chr224034480340344880+intron-Distal5.524608.42544K562PTBP1
chr224035726440357322+intron-Distal4.199863.06194K562ILF3
chr224034510240345232+intron-Distal4.947637.23552K562HNRNPK
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for GRAP2 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for GRAP2 is not available on ENCORE database.

  • 81 RBPs can affect the levels of GRAP2.  








The Knockdown/knockout RNA-Seq assay for GRAP2 is not available on ENCORE database.





81 RBPs can affect the gene expression of GRAP2 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
GRAP2ENSG00000100351.1228.648705.365702.416504.088303.28390HepG2AUH
GRAP2ENSG00000100351.1233.720003.443603.291506.751505.66840HepG2DAZAP1
GRAP2ENSG00000100351.1227.626903.258503.083705.381304.51700HepG2DNAJC2
GRAP2ENSG00000100351.1232.521103.897703.060605.293203.76470HepG2AGO1
GRAP2ENSG00000100351.1238.640701.504704.682408.965707.08980HepG2FUS
GRAP2ENSG00000100351.12121.631809.161203.730707.473005.66230HepG2GRSF1
GRAP2ENSG00000100351.1215.597601.426203.451002.783601.41140HepG2HLTF
GRAP2ENSG00000100351.1217.461403.136502.476802.219901.60670HepG2HNRNPL
GRAP2ENSG00000100351.1231.294908.047801.959202.915401.63310HepG2KRR1
GRAP2ENSG00000100351.120.458009.04710-4.304002.151301.38420HepG2PABPC1
GRAP2ENSG00000100351.1230.201603.628703.057005.162804.05350HepG2PARN
GRAP2ENSG00000100351.1262.138903.814204.0259013.9059012.71180HepG2PCBP1
GRAP2ENSG00000100351.1215.009501.323603.503303.116901.42530HepG2SND1
GRAP2ENSG00000100351.1218.425603.219202.516802.855602.21990HepG2SRSF5
GRAP2ENSG00000100351.1215.609603.660802.092101.849001.32210HepG2SUCLG1
GRAP2ENSG00000100351.121487.344501194.224900.316602.582201.44780K562AARS
GRAP2ENSG00000100351.123063.047002226.979900.459805.092503.41850K562ABCF1
GRAP2ENSG00000100351.121843.135803347.05730-0.8607024.2236022.66010K562AGGF1
GRAP2ENSG00000100351.122770.200203677.70830-0.408804.005302.77620K562AKAP8
GRAP2ENSG00000100351.121768.132403482.71520-0.9780022.3597020.16840K562AKAP8L
GRAP2ENSG00000100351.121502.553202607.14590-0.7951012.6813011.55690K562AQR
GRAP2ENSG00000100351.122683.745303654.11290-0.445308.133106.44460K562ATP5C1
GRAP2ENSG00000100351.122256.717203087.87410-0.452405.738102.86940K562AUH
GRAP2ENSG00000100351.122003.792901568.629800.353104.656102.87720K562BCCIP
GRAP2ENSG00000100351.122071.107301515.860600.450208.409506.69850K562BCLAF1
GRAP2ENSG00000100351.122297.928701695.147100.438804.612402.95710K562CIRBP
GRAP2ENSG00000100351.123046.318102333.849500.384306.277804.57560K562CPEB4
GRAP2ENSG00000100351.121875.902501359.218400.464705.872004.73420K562CPSF6
GRAP2ENSG00000100351.124830.323704001.450200.271503.084102.05570K562CELF1
GRAP2ENSG00000100351.122292.836401903.326200.268502.991401.73150K562DDX21
GRAP2ENSG00000100351.122926.041903747.96210-0.357205.929704.57940K562DKC1
GRAP2ENSG00000100351.12808.124301112.65810-0.461403.991702.35460K562DNAJC21
GRAP2ENSG00000100351.12986.036901271.28880-0.366602.576801.69890K562EFTUD2
GRAP2ENSG00000100351.12857.606401361.21900-0.666506.029104.41490K562EIF3D
GRAP2ENSG00000100351.121022.832401366.64880-0.418102.836302.03030K562EIF3G
GRAP2ENSG00000100351.12993.296401310.05400-0.399302.213201.47590K562EIF4A3
GRAP2ENSG00000100351.121945.983501274.546600.610406.688104.48580K562GEMIN5
GRAP2ENSG00000100351.121020.942101297.69100-0.346002.724301.93560K562GPKOW
GRAP2ENSG00000100351.121613.980702409.89600-0.578307.461506.20620K562GRSF1
GRAP2ENSG00000100351.121757.061303279.29660-0.900205.207803.35410K562HNRNPA2B1
GRAP2ENSG00000100351.121796.286701306.856600.458805.338204.53420K562HNRNPC
GRAP2ENSG00000100351.12994.332801579.48490-0.667707.480105.35800K562HNRNPK
GRAP2ENSG00000100351.121361.660902182.57140-0.6807011.267208.99860K562HNRNPL
GRAP2ENSG00000100351.121525.160401924.55170-0.335603.949102.87600K562HNRNPU
GRAP2ENSG00000100351.121940.976703696.20510-0.9293013.9468011.61560K562KIF1C
GRAP2ENSG00000100351.121742.131101325.323900.394403.115301.54870K562LIN28B
GRAP2ENSG00000100351.121467.574701165.167400.332802.953501.36830K562LSM11
GRAP2ENSG00000100351.122532.798103538.03680-0.482203.246902.05610K562MAK16
GRAP2ENSG00000100351.122305.877201658.777700.475105.102703.80320K562MATR3
GRAP2ENSG00000100351.123058.398404140.65910-0.437104.131402.98550K562MBNL1
GRAP2ENSG00000100351.122838.003603468.69790-0.289502.479301.41200K562MSI2
GRAP2ENSG00000100351.121420.494101693.58700-0.253702.971702.13450K562MTPAP
GRAP2ENSG00000100351.121551.917002902.28690-0.903107.650405.89550K562NAA15
GRAP2ENSG00000100351.122181.508601881.736900.213203.162002.36790K562NSUN2
GRAP2ENSG00000100351.121361.563102179.87850-0.679004.550502.93160K562PABPC1
GRAP2ENSG00000100351.121227.015502869.81650-1.225807.240205.37710K562PABPN1
GRAP2ENSG00000100351.121057.210401478.86470-0.484205.041703.71470K562PCBP2
GRAP2ENSG00000100351.121746.087802187.34640-0.325102.213701.47080K562PCBP3
GRAP2ENSG00000100351.121187.754901677.79300-0.498306.600705.37340K562POLR2G
GRAP2ENSG00000100351.122265.055001817.524800.317502.322001.57160K562PPIG
GRAP2ENSG00000100351.12538.374101237.10900-1.2003019.9975017.97440K562PRPF8
GRAP2ENSG00000100351.121664.023201171.717400.506005.903404.50290K562PSIP1
GRAP2ENSG00000100351.122001.184403550.62670-0.8272016.1343014.13340K562PUF60
GRAP2ENSG00000100351.121463.959403454.25290-1.2385030.5196028.69090K562PUS1
GRAP2ENSG00000100351.121499.412203365.35480-1.1664020.3133018.66060K562RBM15
GRAP2ENSG00000100351.121698.588001068.960700.6680010.556608.61220K562RCC2
GRAP2ENSG00000100351.122490.693901629.352500.612107.461805.59020K562NELFE
GRAP2ENSG00000100351.121147.211901494.87960-0.381903.545402.31460K562SAFB
GRAP2ENSG00000100351.121356.157002625.30400-0.953004.686002.98990K562SF1
GRAP2ENSG00000100351.121028.305201234.69920-0.263902.054301.31940K562SF3B4
GRAP2ENSG00000100351.121352.229803013.78250-1.156207.445405.07320K562SNRNP200
GRAP2ENSG00000100351.122534.228601902.309700.413709.223707.62220K562SRPK2
GRAP2ENSG00000100351.121969.489901583.382700.314702.939302.21370K562SRSF1
GRAP2ENSG00000100351.121913.455501442.916700.407104.298902.94260K562SRSF4
GRAP2ENSG00000100351.122824.858102100.460300.427404.338502.60520K562SSRP1
GRAP2ENSG00000100351.122701.833901921.071000.491904.932603.18110K562STAU1
GRAP2ENSG00000100351.121153.150101682.83730-0.545307.732906.34980K562SYNCRIP
GRAP2ENSG00000100351.121221.590601602.29680-0.391403.279502.50750K562TARDBP
GRAP2ENSG00000100351.121778.304201237.663900.522805.821703.49110K562TBRG4
GRAP2ENSG00000100351.121448.157701091.882400.407303.161001.35890K562TFIP11
GRAP2ENSG00000100351.123120.659902474.777500.334505.651103.80790K562TROVE2
GRAP2ENSG00000100351.12912.945201188.63630-0.380703.677402.74830K562U2AF2
GRAP2ENSG00000100351.121627.115301995.24480-0.294204.087003.23000K562UPF1
GRAP2ENSG00000100351.122513.955101844.659200.446505.647203.27330K562UPF2
GRAP2ENSG00000100351.121468.252703501.89330-1.2540010.926307.88390K562UTP18
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for GRAP2 is not available on ENCORE database.





14 RBPs can affect the splicing of GRAP2 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SEGRAP2ENSG00000100351.12chr22+4035535040355530403518224035191440356058403561780.061000.000000.00000includedK562HNRNPL
SEGRAP2ENSG00000100351.12chr22+403619934036216240356058403561784036404540364276-0.056000.000740.02744excludedK562UTP18
A5SSGRAP2ENSG00000100351.12chr22+403430964034318840343096403431474035182240351914-0.298000.000000.00000shorterK562SRSF1
A5SSGRAP2ENSG00000100351.12chr22+403430964034318840343096403431474035182240351914-0.152000.000110.01407shorterK562AKAP8L
MXEGRAP2ENSG00000100351.12chr22+40343096403431884035182240351914402970854029733440356058403561780.166000.000010.000881includedK562PTBP1
MXEGRAP2ENSG00000100351.12chr22+4034309640343188403518224035191440297085402973344035605840356178-0.104000.001340.040012includedK562UCHL5
MXEGRAP2ENSG00000100351.12chr22+4035605840356178403619934036216240351822403519144036404540364276-0.120000.000980.017962includedK562DROSHA
MXEGRAP2ENSG00000100351.12chr22+4035182240351914403560584035617840343096403431884036199340362162-0.269000.000000.000002includedK562SRSF1
MXEGRAP2ENSG00000100351.12chr22+4035605840356178403619934036216240351822403519144036404540364276-0.178000.000020.002092includedK562LIN28B
MXEGRAP2ENSG00000100351.12chr22+40356058403561784036199340362162403518224035191440364045403642760.101000.001070.016731includedK562U2AF2
MXEGRAP2ENSG00000100351.12chr22+4035605840356178403619934036216240351822403519144036404540364276-0.119000.000320.015162includedK562SBDS
MXEGRAP2ENSG00000100351.12chr22+4035605840356178403619934036216240351822403519144036404540364276-0.139000.000450.010732includedK562HNRNPC
MXEGRAP2ENSG00000100351.12chr22+40356058403561784036199340362162403518224035191440364045403642760.129000.000130.007831includedK562DDX55
MXEGRAP2ENSG00000100351.12chr22+4035605840356178403619934036216240351822403519144036404540364276-0.151000.000190.048252includedK562LSM11
MXEGRAP2ENSG00000100351.12chr22+4035605840356178403619934036216240351822403519144036404540364276-0.130000.000610.089242includedK562GPKOW

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for GRAP2 is not avaliable on ENCORE database.