GNL2

General Information

Gene Name       : GNL2
Gene ID             : ENSG00000134697.12
Essential Gene : Yes

Functions

Localization

Domains (AlphaFold: GNL2)


Antibody Validation


Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878GNL2ENSG00000134697.1287.0498.8792.96ENCSR000AEF
HepG2GNL2ENSG00000134697.1261.4470.5465.99ENCSR985KAT
K562GNL2ENSG00000134697.12183.14214.12198.63ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for GNL2 is not avaliable on ENCORE database.



Proteins bound to RNA

  • GNL2 RNA is bound by 24 proteins.  







eCLIP assay for GNL2 is not avaliable on ENCORE database.





24 proteins are bound to GNL2 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr13806139238061431-5'-UTR,CDS,intron-Distal3.9215312.52978K562YBX3
chr13806135938061514-5'-UTR,CDS,intron-Distal3.5734017.33388K562DDX3X
chr13806147638061536-5'-UTR,intron-Distal,intron-Proximal3.149384.54922K562FXR2
chr13806146938061536-5'-UTR,intron-Distal,intron-Proximal5.583709.50805K562FMR1
chr13806143138061477-5'-UTR,intron-Distal3.225508.41462K562YBX3
chr13804119738041266-CDS,intron-Distal3.328895.30777HepG2PPIG
chr13805630638056329-CDS,intron-Distal,intron-Proximal3.061495.10726K562UCHL5
chr13804002038040056-CDS,intron-Distal3.299756.95218K562UCHL5
chr13803327338033277-CDS,intron-Distal,intron-Proximal4.7550612.19074K562UCHL5
chr13805306838053102-CDS,intron-Distal,intron-Proximal3.126095.96743K562BUD13
chr13804000038040051-CDS,intron-Distal3.253123.92909K562GRWD1
chr13805831138058381-CDS,intron-Distal,intron-Proximal4.6553312.30997K562LIN28B
chr13803481438034896-CDS,intron-Distal3.383984.41784HepG2GRWD1
chr13803999138040044-CDS,intron-Distal3.065883.94979HepG2BCLAF1
chr13803387538033902-CDS,intron-Distal,intron-Proximal3.141155.38953K562ZNF622
chr13803484038034929-CDS,intron-Distal,intron-Proximal3.247895.12776HepG2U2AF2
chr13803257138032609-CDS,intron-Distal3.467939.32936K562ZNF622
chr13804022838040288-CDS,intron-Distal,intron-Proximal4.015194.75655HepG2PRPF8
chr13803482938034897-CDS,intron-Distal3.1469015.17014K562UCHL5
chr13803455638034662-CDS,intron-Distal3.090213.36366K562LIN28B
chr13804782338047856-CDS,intron-Distal,intron-Proximal3.555428.50021K562YBX3
chr13803472938034814-CDS,intron-Distal3.194723.80299HepG2GRWD1
chr13803332338033372-CDS,intron-Distal,intron-Proximal3.426103.31144K562TRA2A
chr13804119638041267-CDS,intron-Distal5.269895.42280K562FXR2
chr13804785638047880-CDS,intron-Distal,intron-Proximal3.155645.58482K562YBX3
chr13803464038034698-CDS,intron-Distal3.300676.26015K562RBM15
chr13803387438033901-CDS,intron-Distal,intron-Proximal3.9288213.33074K562UCHL5
chr13803331638033362-CDS,intron-Distal4.422594.37348HepG2BCLAF1
chr13803254538032609-CDS,intron-Distal3.6573318.76078K562UCHL5
chr13804790438047935-CDS,intron-Distal3.872793.60441HepG2GRWD1
chr13804709138047175-CDS,intron-Distal,intron-Proximal3.762606.04229K562RBM15
chr13803248238032571-CDS,intron-Distal3.7878413.36200K562ZNF622
chr13803394338033959-CDS,intron-Distal,intron-Proximal3.401288.01687K562UCHL5
chr13804120038041257-CDS,intron-Distal3.242298.82209K562UCHL5
chr13804026538040314-CDS,intron-Distal,intron-Proximal3.8407411.85892K562UCHL5
chr13805640638056438-CDS,intron-Distal5.5075910.31179K562LIN28B
chr13803335738033365-CDS,intron-Distal3.9052011.16705K562UCHL5
chr13803989638039969-CDS,intron-Distal,intron-Proximal4.241446.79646HepG2PRPF8
chr13803453338034625-CDS,intron-Distal4.3663614.65767K562UCHL5
chr13803445338034564-CDS,intron-Distal3.1288314.55779K562ZNF622
chr13803445038034533-CDS,intron-Distal,intron-Proximal3.4768514.29660K562UCHL5
chr13804947138049511-CDS,intron-Distal4.276654.26679K562GRWD1
chr13803472238034854-CDS,intron-Distal3.138039.98683K562ZNF800
chr13805632938056433-CDS,intron-Distal,intron-Proximal4.534513.25872K562IGF2BP1
chr13803376738033884-CDS,intron-Distal,intron-Proximal4.3011019.18050K562AQR
chr13803390238033956-CDS,intron-Distal3.065386.26128K562ZNF622
chr13805291338052946-CDS,intron-Distal3.106004.80218K562UCHL5
chr13804036838040418-CDS,intron-Distal,intron-Proximal3.239113.92909K562GRWD1
chr13804121438041273-CDS,intron-Distal4.152284.72880HepG2GRWD1
chr13805634838056406-CDS,intron-Distal,intron-Proximal4.554715.00488K562LIN28B
chr13805291138052991-CDS,intron-Distal,intron-Proximal3.023986.61135K562GRWD1
chr13804946838049489-CDS,intron-Distal3.713114.49887K562ZNF622
chr13804026538040302-CDS,intron-Distal,intron-Proximal3.999723.16051HepG2PPIG
chr13804944138049514-CDS,intron-Distal,intron-Proximal3.240236.93851K562BUD13
chr13803327038033323-CDS,intron-Distal,intron-Proximal4.291373.48757K562TRA2A
chr13803473538034829-CDS,intron-Distal3.6676723.13223K562UCHL5
chr13804686038046975-CDS,intron-Distal,intron-Proximal3.627955.38829K562KHSRP
chr13806136038061385-CDS,intron-Distal3.159627.19943K562YBX3
chr13804837538048477-CDS,intron-Distal,intron-Proximal3.092338.80715HepG2BCLAF1
chr13803390138033943-CDS,intron-Distal4.3882817.13945K562UCHL5
chr13803482538034935-CDS,intron-Distal,intron-Proximal3.3867712.96871K562SF3B4
chr13804852538048575-CDS,intron-Distal,intron-Proximal3.215594.50936K562SF3B4
chr13803331038033357-CDS,intron-Distal4.0007117.09641K562UCHL5
chr13803252138032614-CDS,intron-Distal3.045545.08972HepG2AQR
chr13805291138052938-CDS,intron-Distal,intron-Proximal4.574973.63055K562ZNF800
chr13804035438040418-CDS,intron-Distal,intron-Proximal4.030345.65086HepG2BCLAF1
chr13803327738033310-CDS,intron-Distal4.3292016.89929K562UCHL5
chr13805643838056447-CDS,intron-Distal,intron-Proximal5.286378.55117K562LIN28B
chr13803994538039993-CDS,intron-Distal3.859803.12746HepG2GRWD1
chr13804120638041252-CDS,intron-Distal3.741304.93978HepG2BCLAF1
chr13803865538038766-intron-Distal3.582845.35441K562HNRNPL
chr13804940338049453-intron-Distal,intron-Proximal4.001343.54514K562TIA1
chr13804657538046655-intron-Distal3.193514.13575K562KHSRP
chr13804632438046387-intron-Distal4.767796.58366HepG2SUGP2
chr13804940538049466-intron-Distal,intron-Proximal3.662635.75231K562AQR
chr13805622938056292-intron-Distal,intron-Proximal3.636865.83621K562AQR
chr13804927338049358-intron-Distal5.041817.02967HepG2PRPF8
chr13803377238033799-intron-Distal,intron-Proximal4.176913.02181K562PRPF8
chr13806130138061359-intron-Distal4.784594.65563K562AQR
chr13804829438048375-intron-Distal,intron-Proximal4.077075.63763K562AQR
chr13804583938045902-intron-Distal4.318453.86809HepG2SUGP2
chr13805418938054337-intron-Distal3.096755.62342K562KHSRP
chr13804998438050053-intron-Distal3.517963.16560K562HNRNPC
chr13804651138046579-intron-Distal3.300536.05394HepG2SUGP2
chr13804014838040214-intron-Distal,intron-Proximal3.419623.88924K562PRPF8
chr13804198038042026-intron-Distal,intron-Proximal3.407154.41130K562AQR
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for GNL2 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for GNL2 is not available on ENCORE database.

  • 79 RBPs can affect the levels of GNL2.  








The Knockdown/knockout RNA-Seq assay for GNL2 is not available on ENCORE database.





79 RBPs can affect the gene expression of GNL2 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
GNL2ENSG00000134697.81178.33460876.472500.426906.214605.37720HepG2ACO1
GNL2ENSG00000134697.81960.293901167.869800.747107.841706.99570HepG2AKAP1
GNL2ENSG00000134697.8680.39230966.33210-0.506203.833402.91400HepG2ASCC1
GNL2ENSG00000134697.81069.422801410.14610-0.399005.524904.61230HepG2AUH
GNL2ENSG00000134697.8561.99520806.08090-0.520403.516902.50680HepG2BCLAF1
GNL2ENSG00000134697.81032.77450876.220700.237102.275601.66330HepG2CKAP4
GNL2ENSG00000134697.81762.993801311.642400.426606.865105.93900HepG2CELF1
GNL2ENSG00000134697.81217.663001410.14300-0.211702.001201.35480HepG2DAZAP1
GNL2ENSG00000134697.8731.05700960.95550-0.394502.297701.73000HepG2DDX6
GNL2ENSG00000134697.8648.06900838.53080-0.371703.556802.80460HepG2DKC1
GNL2ENSG00000134697.8607.80320773.30150-0.347403.621202.89370HepG2DNAJC2
GNL2ENSG00000134697.8787.584901021.03910-0.374502.098901.53960HepG2EIF4A3
GNL2ENSG00000134697.81391.67610994.041900.485302.931302.22430HepG2EIF4B
GNL2ENSG00000134697.81789.484401391.360300.362905.634604.51260HepG2EIF4G1
GNL2ENSG00000134697.8921.288001332.80400-0.532705.053503.97260HepG2EIF4G2
GNL2ENSG00000134697.8938.068301205.01050-0.361302.235601.65700HepG2GPKOW
GNL2ENSG00000134697.8546.24290787.64190-0.528004.448603.65420HepG2HNRNPA1
GNL2ENSG00000134697.8645.87600876.11370-0.439903.363502.60540HepG2HNRNPC
GNL2ENSG00000134697.8944.713501425.67740-0.5937010.750709.45760HepG2HNRNPF
GNL2ENSG00000134697.81379.34240967.465500.511604.915504.00560HepG2HNRNPK
GNL2ENSG00000134697.8872.375101149.96670-0.398602.856502.21810HepG2HNRNPLL
GNL2ENSG00000134697.8877.881301403.89110-0.6773010.241108.93260HepG2IGF2BP1
GNL2ENSG00000134697.8627.18050801.16760-0.353203.789402.59690HepG2KIF1C
GNL2ENSG00000134697.81672.971701036.201700.691006.892505.92900HepG2MATR3
GNL2ENSG00000134697.8818.243101172.88710-0.519502.935401.93390HepG2MTPAP
GNL2ENSG00000134697.81157.232101398.30530-0.273002.035001.37830HepG2NOL12
GNL2ENSG00000134697.8820.044101019.68880-0.314401.941201.30940HepG2NSUN2
GNL2ENSG00000134697.81193.75070691.515600.787605.037003.80820HepG2PABPC1
GNL2ENSG00000134697.81223.26960953.209100.359804.515003.77170HepG2PCBP1
GNL2ENSG00000134697.81747.409301416.000300.303303.181902.46230HepG2PUM2
GNL2ENSG00000134697.8705.72120892.73510-0.339103.547602.86870HepG2PUS1
GNL2ENSG00000134697.81325.76940894.953700.566802.895002.17630HepG2RAVER1
GNL2ENSG00000134697.81232.637101535.71640-0.317202.504101.84920HepG2RPLP0
GNL2ENSG00000134697.81295.41280928.822400.479804.264202.91640HepG2RPS5
GNL2ENSG00000134697.8939.99450696.029200.433402.707301.92770HepG2RRP9
GNL2ENSG00000134697.8654.67920775.05460-0.243501.899801.34950HepG2SAFB2
GNL2ENSG00000134697.8937.27930644.192200.540904.645103.44140HepG2SERBP1
GNL2ENSG00000134697.81761.504201039.227300.761207.072205.95980HepG2SF3A3
GNL2ENSG00000134697.8999.314901280.05100-0.357204.575303.70840HepG2SLBP
GNL2ENSG00000134697.81086.61270903.836900.265602.997702.33160HepG2SMN1
GNL2ENSG00000134697.81512.016401054.029000.520509.297608.54490HepG2SRSF1
GNL2ENSG00000134697.8991.016901400.66070-0.499107.846906.77300HepG2SRSF7
GNL2ENSG00000134697.8803.268901120.94710-0.480804.221203.34940HepG2TARDBP
GNL2ENSG00000134697.81688.00560957.980800.8172011.134109.85080HepG2U2AF1
GNL2ENSG00000134697.8742.70580921.63420-0.311403.005502.28360HepG2UPF1
GNL2ENSG00000134697.81090.75950889.804000.293702.774102.17670HepG2UTP3
GNL2ENSG00000134697.84478.686803389.807800.401804.931503.29760K562AARS
GNL2ENSG00000134697.85665.242104564.242200.311706.382205.57290K562AGGF1
GNL2ENSG00000134697.86437.228904983.220700.369306.587705.10000K562ATP5C1
GNL2ENSG00000134697.83218.504903942.21800-0.292604.269602.57820K562BCCIP
GNL2ENSG00000134697.81498.164201991.21050-0.410403.894502.59970K562CCAR1
GNL2ENSG00000134697.82896.942603981.09140-0.458604.837103.80480K562CPSF6
GNL2ENSG00000134697.811850.123609922.217200.256103.266902.20790K562CELF1
GNL2ENSG00000134697.83962.655603340.316400.246403.383001.90340K562DDX27
GNL2ENSG00000134697.89242.526406101.168700.5991021.2774019.63220K562DDX47
GNL2ENSG00000134697.86739.037905110.480500.399008.158906.51260K562DKC1
GNL2ENSG00000134697.83419.224005286.01560-0.6285017.7997016.20820K562EIF2S2
GNL2ENSG00000134697.82773.591002025.460800.453402.380201.45340K562EIF3A
GNL2ENSG00000134697.84717.698703359.236400.489809.953208.43820K562EIF3G
GNL2ENSG00000134697.83032.251103644.20930-0.265202.193201.45880K562EIF4A3
GNL2ENSG00000134697.86560.476708069.68070-0.298705.001703.75700K562EIF4G2
GNL2ENSG00000134697.82720.813504050.40670-0.574005.807204.55770K562FMR1
GNL2ENSG00000134697.82682.734503432.97240-0.355802.919701.97940K562FTO
GNL2ENSG00000134697.84431.069803789.832000.225402.928202.30810K562FXR1
GNL2ENSG00000134697.85975.400607044.38810-0.237402.292501.60110K562GRSF1
GNL2ENSG00000134697.82524.494203710.14190-0.555507.481006.54460K562HNRNPC
GNL2ENSG00000134697.82691.762403312.71590-0.299502.777001.63110K562HNRNPF
GNL2ENSG00000134697.86485.752404188.515800.630708.614906.38860K562HNRNPK
GNL2ENSG00000134697.86186.792205040.144700.295603.268602.36480K562KIF1C
GNL2ENSG00000134697.85404.999203957.615400.449603.425702.42290K562NAA15
GNL2ENSG00000134697.84422.545505063.18720-0.195204.270503.36550K562NSUN2
GNL2ENSG00000134697.84696.293403921.457600.260002.249201.37180K562PCBP2
GNL2ENSG00000134697.84448.991203313.661600.425004.709003.73320K562PRPF8
GNL2ENSG00000134697.82595.601203326.40690-0.357902.877901.95230K562PSIP1
GNL2ENSG00000134697.85184.130204281.763900.275802.203901.60050K562PTBP1
GNL2ENSG00000134697.88024.667909175.96000-0.193402.343701.45840K562PUM2
GNL2ENSG00000134697.86199.717804709.876300.396404.451603.78570K562PUS1
GNL2ENSG00000134697.85446.196604589.187200.246903.168902.54120K562RBM15
GNL2ENSG00000134697.83414.385904106.22010-0.266202.177901.43640K562RBM22
GNL2ENSG00000134697.82446.549703034.31810-0.310603.271102.19150K562RCC2
GNL2ENSG00000134697.84629.235503375.582600.455504.313303.28930K562RPS19
GNL2ENSG00000134697.84182.835602835.764900.560604.035302.12140K562SERBP1
GNL2ENSG00000134697.85715.078303883.535900.5573011.107209.32750K562SF3B4
GNL2ENSG00000134697.82325.334002876.51430-0.306902.637901.64320K562SRFBP1
GNL2ENSG00000134697.82741.245003592.61920-0.390204.812103.36420K562SRSF4
GNL2ENSG00000134697.84362.549903571.850700.288403.306902.40940K562SYNCRIP
GNL2ENSG00000134697.83066.001504248.32270-0.470505.231204.24150K562TARDBP
GNL2ENSG00000134697.83479.897004097.92660-0.235802.211601.48620K562TIA1
GNL2ENSG00000134697.82337.690503199.51950-0.452804.238603.05980K562TIAL1
GNL2ENSG00000134697.85849.156503620.124300.692108.641106.53440K562U2AF1
GNL2ENSG00000134697.86163.658503739.013500.7210017.8989015.80070K562U2AF2
GNL2ENSG00000134697.83999.117605368.59990-0.4249011.329009.99790K562UPF1
GNL2ENSG00000134697.83896.323204593.74930-0.237602.209501.42790K562WDR3
GNL2ENSG00000134697.85910.802804776.911600.307207.041405.74940K562WDR43
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for GNL2 is not available on ENCORE database.





7 RBPs can affect the splicing of GNL2 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SEGNL2ENSG00000134697.8chr1-3804694238047146380420283804215738047823380479370.448000.000000.00000includedHepG2HNRNPK
SEGNL2ENSG00000134697.8chr1-3804694238047146380420283804215738047823380479370.295000.000000.00000includedHepG2MATR3
SEGNL2ENSG00000134697.8chr1-3804694238047146380420393804215738047823380479370.092000.000080.01862includedK562HNRNPM
SEGNL2ENSG00000134697.8chr1-3804694238047146380420283804215738047823380479370.055000.000020.00822includedK562UPF1
SEGNL2ENSG00000134697.8chr1-3804694238047146380420283804215738047823380479370.068000.000000.00000includedK562HNRNPK
SEGNL2ENSG00000134697.8chr1-3804694238047146380420283804215738047823380479370.053000.000030.01291includedK562SERBP1
A3SSGNL2ENSG00000134697.8chr1-3803241638032654380324163803260838033273380337160.089000.000000.00000longerK562AQR
A3SSGNL2ENSG00000134697.8chr1-3803327338033412380332733803336538033875380340420.082000.000000.00000longerK562AQR
A3SSGNL2ENSG00000134697.8chr1-3804026538040500380402653804042438041195380413000.141000.000000.00000longerK562AQR
MXEGNL2ENSG00000134697.8chr1-38052911380530963805630638056446380494673804953438058312380584070.212000.000290.007581includedK562DROSHA
MXEGNL2ENSG00000134697.8chr1-38042028380421573804694238047146380411953804130038047823380479370.181000.000000.000001includedHepG2HNRNPK

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for GNL2 is not avaliable on ENCORE database.