GADD45GIP1

General Information

Gene Name       : GADD45GIP1
Gene ID             : ENSG00000179271.2
Essential Gene : Yes

Functions

Localization

Domains (AlphaFold: GADD45GIP1)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878GADD45GIP1ENSG00000179271.20.634.352.49ENCSR000AEF
HepG2GADD45GIP1ENSG00000179271.233.027.0920.05ENCSR985KAT
K562GADD45GIP1ENSG00000179271.214.657.7511.20ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for GADD45GIP1 is not avaliable on ENCORE database.



Proteins bound to RNA
  • GADD45GIP1 RNA is bound by 12 proteins.  







eCLIP assay for GADD45GIP1 is not avaliable on ENCORE database.





12 proteins are bound to GADD45GIP1 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr191306500813065066-3'-UTR,CDS,intron-Distal5.411465.53421K562PCBP1
chr191306501713065068-3'-UTR,CDS,intron-Distal4.272624.48994K562RBM15
chr191306790213068007-CDS,intron-Distal5.6739819.54678HepG2DDX3X
chr191306503013065102-CDS,intron-Distal3.588459.16203HepG2LARP4
chr191306791413068022-CDS,intron-Distal4.5875315.73138K562DDX3X
chr191306525413065301-CDS,intron-Distal4.731767.35865K562GRWD1
chr191306514713065233-CDS,intron-Distal3.3017210.70099K562UCHL5
chr191306531013065328-CDS,intron-Distal3.925103.43526K562GRWD1
chr191306785713067914-CDS,intron-Distal3.8490810.05151K562DDX3X
chr191306505413065128-CDS,intron-Distal3.425133.53688K562PUM1
chr191306503613065081-CDS,intron-Distal4.330678.84200K562PABPC4
chr191306504513065110-CDS,intron-Distal3.660346.57620K562ZC3H11A
chr191306526313065294-CDS,intron-Distal4.108286.14390K562PABPC4
chr191306520413065237-CDS,intron-Distal3.070063.46047K562GRWD1
chr191306530113065337-CDS,intron-Distal3.915933.18234K562BUD13
chr191306504213065090-CDS,intron-Distal3.8029210.01989K562ZNF622
chr191306513613065189-CDS,intron-Distal4.178529.54233K562PABPC4
chr191306510213065157-CDS,intron-Distal3.119344.26492HepG2BCLAF1
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for GADD45GIP1 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for GADD45GIP1 is not available on ENCORE database.

  • 97 RBPs can affect the levels of GADD45GIP1.  








The Knockdown/knockout RNA-Seq assay for GADD45GIP1 is not available on ENCORE database.





97 RBPs can affect the gene expression of GADD45GIP1 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
GADD45GIP1ENSG00000179271.1189.84580127.046800.579402.303001.39170HepG2ADAR
GADD45GIP1ENSG00000179271.1231.70150520.80950-1.168502.188801.48610HepG2ASCC1
GADD45GIP1ENSG00000179271.1231.33140339.17920-0.552103.060902.25240HepG2CALR
GADD45GIP1ENSG00000179271.1236.15860130.288500.857904.989103.62180HepG2YBX3
GADD45GIP1ENSG00000179271.1605.00960360.349800.747503.499902.79460HepG2CELF1
GADD45GIP1ENSG00000179271.1492.19950387.476500.345002.524101.81070HepG2DAZAP1
GADD45GIP1ENSG00000179271.1195.67000130.463300.584702.445701.35950HepG2DDX1
GADD45GIP1ENSG00000179271.1131.29400221.49330-0.754502.123701.33360HepG2DDX24
GADD45GIP1ENSG00000179271.1191.62280127.923600.582902.636501.94640HepG2DNAJC21
GADD45GIP1ENSG00000179271.1223.82850126.808500.819603.993003.23850HepG2DNAJC2
GADD45GIP1ENSG00000179271.1493.98560359.936300.456602.342501.49200HepG2EEF2
GADD45GIP1ENSG00000179271.1409.61850261.164400.649205.133203.50550HepG2FAM120A
GADD45GIP1ENSG00000179271.1331.24160489.40380-0.563104.031003.09040HepG2FUBP3
GADD45GIP1ENSG00000179271.1274.37130161.561000.764003.760702.14600HepG2HNRNPA0
GADD45GIP1ENSG00000179271.1608.43560352.965100.7855010.608109.36760HepG2HNRNPL
GADD45GIP1ENSG00000179271.1292.18510142.709401.033709.687408.60880HepG2HNRNPU
GADD45GIP1ENSG00000179271.1289.12590145.772100.987909.387808.11730HepG2ILF2
GADD45GIP1ENSG00000179271.1336.75540182.032100.887405.648503.86000HepG2KHDRBS1
GADD45GIP1ENSG00000179271.1321.20730197.840800.699103.402502.14530HepG2LARP7
GADD45GIP1ENSG00000179271.1524.37340384.220300.448602.258801.57010HepG2NOL12
GADD45GIP1ENSG00000179271.1483.36190641.02340-0.407302.232801.55820HepG2NSUN2
GADD45GIP1ENSG00000179271.1202.17260141.251800.517202.206101.44170HepG2PARN
GADD45GIP1ENSG00000179271.1308.17330127.284501.2756013.5597012.00520HepG2PPIL4
GADD45GIP1ENSG00000179271.1328.26260472.30890-0.524904.058403.42380HepG2PTBP1
GADD45GIP1ENSG00000179271.1512.60070366.768500.482903.201102.56630HepG2PUF60
GADD45GIP1ENSG00000179271.1619.72740389.337100.670509.057708.11590HepG2PUM1
GADD45GIP1ENSG00000179271.1570.64840389.055100.552502.961802.26740HepG2PUM2
GADD45GIP1ENSG00000179271.1414.16310508.51690-0.296101.987501.44640HepG2PUS1
GADD45GIP1ENSG00000179271.1386.66830511.46590-0.403502.509001.90900HepG2QKI
GADD45GIP1ENSG00000179271.1335.45190464.20940-0.468702.892302.20530HepG2RBM25
GADD45GIP1ENSG00000179271.1405.74990238.581800.766002.603101.64150HepG2RBM27
GADD45GIP1ENSG00000179271.1322.91560184.386600.808304.323802.42640HepG2RBM47
GADD45GIP1ENSG00000179271.1330.07980193.740700.768603.656202.43640HepG2RCC2
GADD45GIP1ENSG00000179271.1363.47960525.61250-0.532104.280103.63370HepG2NELFE
GADD45GIP1ENSG00000179271.1379.95550489.57640-0.365702.294901.72710HepG2RECQL
GADD45GIP1ENSG00000179271.1374.90410220.004500.768903.696002.77490HepG2RPS2
GADD45GIP1ENSG00000179271.1309.29880191.814200.689203.331402.45420HepG2RPS3A
GADD45GIP1ENSG00000179271.1401.15710224.610400.836605.135603.65460HepG2RPS5
GADD45GIP1ENSG00000179271.1338.74390127.086201.4143017.9117016.47880HepG2SAFB2
GADD45GIP1ENSG00000179271.1320.04690180.621700.825204.763103.04630HepG2SART3
GADD45GIP1ENSG00000179271.1307.50590182.117600.755603.450701.71750HepG2SBDS
GADD45GIP1ENSG00000179271.1179.99510285.32100-0.664602.295201.43560HepG2SERBP1
GADD45GIP1ENSG00000179271.11068.15000646.301500.724704.524603.65190HepG2SF3A3
GADD45GIP1ENSG00000179271.1565.91440715.61820-0.338602.017201.40980HepG2SF3B1
GADD45GIP1ENSG00000179271.1549.84060351.665800.644707.445206.38020HepG2SLBP
GADD45GIP1ENSG00000179271.1347.56920148.199201.2297014.7647013.46380HepG2SMN1
GADD45GIP1ENSG00000179271.1343.37750192.034000.838303.210102.17000HepG2SMNDC1
GADD45GIP1ENSG00000179271.1312.90640513.23420-0.713904.795304.21640HepG2SRSF1
GADD45GIP1ENSG00000179271.1582.88740362.125800.686607.996707.00370HepG2SRSF5
GADD45GIP1ENSG00000179271.1326.50000166.916100.967906.595504.83660HepG2STIP1
GADD45GIP1ENSG00000179271.1669.32470411.840800.700509.602608.56230HepG2SUCLG1
GADD45GIP1ENSG00000179271.1231.93200461.36860-0.9922011.0101010.00930HepG2TAF15
GADD45GIP1ENSG00000179271.1510.86120704.57220-0.463803.187302.41480HepG2TARDBP
GADD45GIP1ENSG00000179271.1258.15720138.650700.896706.110405.41980HepG2TIAL1
GADD45GIP1ENSG00000179271.1400.89600139.909601.5186017.7348016.46810HepG2TRIM56
GADD45GIP1ENSG00000179271.1632.70890358.310900.820209.014607.27190HepG2TUFM
GADD45GIP1ENSG00000179271.1256.56600147.351900.800003.571502.71180HepG2UCHL5
GADD45GIP1ENSG00000179271.1753.97540553.372700.446204.820704.06620HepG2UTP3
GADD45GIP1ENSG00000179271.1336.22480171.818000.968406.337304.67880HepG2XPO5
GADD45GIP1ENSG00000179271.1851.74430630.377400.434105.653204.94340HepG2ZNF622
GADD45GIP1ENSG00000179271.1980.56190514.054900.9316019.4003018.01310K562AGGF1
GADD45GIP1ENSG00000179271.1546.92720369.564600.565405.695403.46660K562AKAP1
GADD45GIP1ENSG00000179271.1831.04030564.909200.556805.580404.06370K562AKAP8
GADD45GIP1ENSG00000179271.11038.01330534.907400.9564011.281609.83830K562AKAP8L
GADD45GIP1ENSG00000179271.11263.79280974.003000.375702.834101.57840K562APOBEC3C
GADD45GIP1ENSG00000179271.1498.20620842.99430-0.758806.788305.93480K562AQR
GADD45GIP1ENSG00000179271.1987.53520561.265500.8150013.7123011.51090K562ATP5C1
GADD45GIP1ENSG00000179271.1399.06940546.90780-0.454703.166902.32680K562CPSF6
GADD45GIP1ENSG00000179271.11444.424601078.554900.421303.813503.06570K562DDX47
GADD45GIP1ENSG00000179271.1497.76380379.655500.390702.771501.46370K562DDX6
GADD45GIP1ENSG00000179271.1489.99540297.145600.721505.809603.75870K562DHX30
GADD45GIP1ENSG00000179271.1839.51610575.536100.544606.940605.44510K562DKC1
GADD45GIP1ENSG00000179271.1290.90080124.368001.2258010.697209.12780K562EIF3G
GADD45GIP1ENSG00000179271.1332.87440556.45270-0.741306.429105.10560K562FMR1
GADD45GIP1ENSG00000179271.1642.11910406.853100.658207.513306.58200K562FXR1
GADD45GIP1ENSG00000179271.19.4189072.49410-2.9442010.246608.72330K562G3BP2
GADD45GIP1ENSG00000179271.11396.781701104.034000.339202.898602.12640K562GRSF1
GADD45GIP1ENSG00000179271.1209.02970565.70060-1.436305.676904.85220K562HNRNPC
GADD45GIP1ENSG00000179271.1956.16450757.334200.336203.024602.09340K562HNRNPU
GADD45GIP1ENSG00000179271.1323.34420210.566400.618703.394102.03760K562IGF2BP3
GADD45GIP1ENSG00000179271.1712.814401447.89810-1.022407.844105.45080K562ILF2
GADD45GIP1ENSG00000179271.1775.98880567.635500.451004.194603.15220K562KIF1C
GADD45GIP1ENSG00000179271.1284.64550548.64160-0.946702.684401.32160K562LARP7
GADD45GIP1ENSG00000179271.1380.50070217.440900.807206.863605.51250K562MAGOH
GADD45GIP1ENSG00000179271.1725.94580543.395200.417802.731001.66320K562MAK16
GADD45GIP1ENSG00000179271.1372.22080216.966400.778605.791604.38540K562MATR3
GADD45GIP1ENSG00000179271.1926.34700635.900000.542702.200601.40580K562MBNL1
GADD45GIP1ENSG00000179271.1703.345201061.50710-0.593809.466408.06220K562MTPAP
GADD45GIP1ENSG00000179271.1426.97430289.595700.560003.063601.68200K562NONO
GADD45GIP1ENSG00000179271.1914.910301179.42920-0.366404.118403.22780K562NSUN2
GADD45GIP1ENSG00000179271.1523.56700285.812600.873207.222706.01360K562PRPF8
GADD45GIP1ENSG00000179271.1509.16790211.273901.2689011.250909.97220K562PTBP1
GADD45GIP1ENSG00000179271.1871.32670530.410100.716007.839806.97220K562PUS1
GADD45GIP1ENSG00000179271.1140.7855081.049700.796503.274601.32540K562QKI
GADD45GIP1ENSG00000179271.1857.65900516.863800.730505.306704.50920K562RBM15
GADD45GIP1ENSG00000179271.1196.93510114.256300.785302.828701.81430K562RPS3
GADD45GIP1ENSG00000179271.1780.806501163.79640-0.575808.838807.43840K562SF3A3
GADD45GIP1ENSG00000179271.1127.5347075.309600.759902.889002.01400K562SF3B4
GADD45GIP1ENSG00000179271.1708.752001192.33460-0.7504016.7242014.69920K562SRPK2
GADD45GIP1ENSG00000179271.1443.55940207.143501.098405.383104.40360K562SRSF1
GADD45GIP1ENSG00000179271.1180.64560110.284900.711802.707201.67370K562SRSF4
GADD45GIP1ENSG00000179271.1348.32300195.692500.831704.209402.86870K562SRSF5
GADD45GIP1ENSG00000179271.117.0609071.15550-2.060305.627203.21860K562TAF15
GADD45GIP1ENSG00000179271.1480.80090209.589601.197805.267504.27460K562TARDBP
GADD45GIP1ENSG00000179271.1402.98120202.186800.994909.694908.04650K562TIA1
GADD45GIP1ENSG00000179271.1382.70480198.531200.946805.754004.04470K562TRA2A
GADD45GIP1ENSG00000179271.129.4680072.51720-1.299204.007703.04330K562U2AF2
GADD45GIP1ENSG00000179271.1833.376901250.57380-0.5855010.183008.91730K562UPF1
GADD45GIP1ENSG00000179271.1707.161301070.07650-0.597607.190005.73810K562WDR3
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for GADD45GIP1 is not available on ENCORE database.






No RBPs affect the alternative splcing events of GADD45GIP1 on ENCORE database.





The Knockdown/knockout RNA-Seq assay for GADD45GIP1 is not avaliable on ENCORE database.