FANCB

General Information

Gene Name       : FANCB
Gene ID             : ENSG00000181544.14
Essential Gene : No

Functions

Localization

Domains (AlphaFold: FANCB)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878FANCBENSG00000181544.146.714.985.85ENCSR000AEF
HepG2FANCBENSG00000181544.141.633.802.71ENCSR985KAT
K562FANCBENSG00000181544.147.667.287.47ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for FANCB is not avaliable on ENCORE database.



Proteins bound to RNA
  • FANCB RNA is bound by 4 proteins.  







eCLIP assay for FANCB is not avaliable on ENCORE database.





4 proteins are bound to FANCB RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chrX1486157614861634-3'-UTR,intron-Distal4.240314.57464K562PUM2
chrX1488322714883318-CDS,intron-Distal4.274367.43250K562QKI
chrX1486997014870089-intron-Distal3.930233.89294K562KHSRP
chrX1488126914881335-intron-Distal3.002534.56635K562KHSRP
chrX1488255414882668-intron-Distal,intron-Proximal3.250663.76473K562KHSRP
chrX1486558114865671-intron-Distal3.137623.45178K562MATR3
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for FANCB is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for FANCB is not available on ENCORE database.

  • 83 RBPs can affect the levels of FANCB.  








The Knockdown/knockout RNA-Seq assay for FANCB is not available on ENCORE database.





83 RBPs can affect the gene expression of FANCB :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
FANCBENSG00000181544.956.84800104.56890-0.879303.068102.35070HepG2AUH
FANCBENSG00000181544.96.9844052.03360-2.897203.649602.97310HepG2BOP1
FANCBENSG00000181544.926.7256053.73350-1.007602.081001.40510HepG2CALR
FANCBENSG00000181544.920.5537070.20680-1.772206.186605.26390HepG2CKAP4
FANCBENSG00000181544.922.5118052.57640-1.223702.589001.92930HepG2DDX21
FANCBENSG00000181544.97.7358033.87310-2.130502.471401.87710HepG2DDX3X
FANCBENSG00000181544.93.9292029.07080-2.887203.280402.61400HepG2DDX6
FANCBENSG00000181544.932.5884067.18530-1.043802.586301.92860HepG2DKC1
FANCBENSG00000181544.95.1307027.97310-2.446802.727502.13890HepG2EIF2S1
FANCBENSG00000181544.938.3809074.50760-0.957002.481801.70900HepG2EIF4G2
FANCBENSG00000181544.959.80900120.05990-1.005304.480503.74930HepG2ETF1
FANCBENSG00000181544.914.0730051.65610-1.876002.360401.77350HepG2HNRNPLL
FANCBENSG00000181544.927.2212057.93780-1.089802.331301.66470HepG2IGF2BP1
FANCBENSG00000181544.97.7453029.41420-1.925102.135001.53260HepG2IGF2BP2
FANCBENSG00000181544.922.3328065.26700-1.547204.291603.01630HepG2PCBP2
FANCBENSG00000181544.926.6262074.63540-1.487004.607403.86100HepG2PUF60
FANCBENSG00000181544.933.97200100.34770-1.562605.984105.29440HepG2RBM22
FANCBENSG00000181544.958.6193029.747400.978502.014001.53680HepG2NELFE
FANCBENSG00000181544.962.1565027.711301.165302.772502.15550HepG2RECQL
FANCBENSG00000181544.99.0596063.37500-2.806408.612907.51140HepG2RPLP0
FANCBENSG00000181544.919.3128061.87140-1.679704.371703.19190HepG2RPS10
FANCBENSG00000181544.99.7942037.57170-1.939603.498102.81550HepG2RPS19
FANCBENSG00000181544.935.4396071.06970-1.003902.238801.51470HepG2RPS2
FANCBENSG00000181544.914.4815069.62760-2.265402.669501.89580HepG2RRP9
FANCBENSG00000181544.927.03070113.33870-2.0680010.305609.50500HepG2SRFBP1
FANCBENSG00000181544.983.5774029.046101.524705.036404.44790HepG2SRSF1
FANCBENSG00000181544.925.8710057.80360-1.159802.688702.00270HepG2SRSF7
FANCBENSG00000181544.942.7923098.40440-1.201404.569103.94350HepG2SSB
FANCBENSG00000181544.914.5552090.71690-2.639803.041602.33650HepG2SUPV3L1
FANCBENSG00000181544.958.7690026.115401.170102.726902.17000HepG2TAF15
FANCBENSG00000181544.915.5043050.39250-1.700502.082901.44150HepG2TARDBP
FANCBENSG00000181544.97.1380054.37000-2.929208.394107.60860HepG2TIAL1
FANCBENSG00000181544.925.0634054.86860-1.130402.788402.22270HepG2TRIM56
FANCBENSG00000181544.915.7831074.62080-2.241204.443803.18290HepG2U2AF2
FANCBENSG00000181544.919.1372059.11240-1.627104.511103.65500HepG2UPF1
FANCBENSG00000181544.94.8528065.01220-3.7438013.8845012.89360HepG2ZNF622
FANCBENSG00000181544.9363.21850499.90420-0.460802.601801.65550K562AKAP8
FANCBENSG00000181544.9478.79030647.14610-0.434702.410601.85660K562AQR
FANCBENSG00000181544.9149.45080238.45170-0.674003.041302.12500K562BOP1
FANCBENSG00000181544.9100.11990158.02530-0.658402.553201.54860K562CCAR1
FANCBENSG00000181544.9328.75400543.69550-0.725807.194005.28110K562CCDC124
FANCBENSG00000181544.9281.64380458.24400-0.702203.081601.54610K562CKAP4
FANCBENSG00000181544.9282.87030493.32390-0.802403.571102.33700K562CNOT7
FANCBENSG00000181544.9175.71760253.51550-0.528802.088601.39920K562CPSF6
FANCBENSG00000181544.9272.70950419.60530-0.621704.656503.25430K562DDX3X
FANCBENSG00000181544.9318.40910581.21650-0.8682010.989009.78830K562DDX47
FANCBENSG00000181544.9297.20420425.42480-0.517403.845102.22600K562DDX6
FANCBENSG00000181544.9386.21130509.41970-0.399502.785001.90800K562DKC1
FANCBENSG00000181544.9225.65930335.43920-0.571902.950302.00850K562EFTUD2
FANCBENSG00000181544.9336.02950460.90250-0.455903.515302.13520K562EIF2S1
FANCBENSG00000181544.9285.56560420.19760-0.557204.334803.46270K562EIF2S2
FANCBENSG00000181544.967.29060160.74580-1.256304.638803.30480K562EIF3A
FANCBENSG00000181544.9207.06770359.21690-0.794804.751103.35050K562EIF3D
FANCBENSG00000181544.9217.86650330.85070-0.602703.898002.96240K562EIF3G
FANCBENSG00000181544.9237.36810438.38480-0.885108.179206.76940K562EIF4A3
FANCBENSG00000181544.9283.70550394.79010-0.476702.555301.46030K562EIF4B
FANCBENSG00000181544.9655.42370942.93480-0.524706.082404.70430K562EIF4G2
FANCBENSG00000181544.9239.95730332.44710-0.470302.373101.58810K562FIP1L1
FANCBENSG00000181544.9165.46130257.99850-0.640902.961802.07570K562FMR1
FANCBENSG00000181544.9134.05090218.69980-0.706203.227502.23380K562FTO
FANCBENSG00000181544.9302.70510455.90190-0.590804.932604.15770K562FXR1
FANCBENSG00000181544.9684.35080488.306300.486802.692601.99720K562G3BP2
FANCBENSG00000181544.9142.36520242.02320-0.765504.109103.14620K562GPKOW
FANCBENSG00000181544.9321.49680559.97160-0.800507.523806.26350K562GRSF1
FANCBENSG00000181544.9149.33650267.15490-0.839102.999702.38150K562HNRNPC
FANCBENSG00000181544.9331.77330525.30270-0.663005.817304.22690K562HNRNPL
FANCBENSG00000181544.9338.74590464.29260-0.454803.334002.35540K562HNRNPU
FANCBENSG00000181544.9263.42460450.71080-0.774806.129504.95630K562HSPD1
FANCBENSG00000181544.9356.17190522.23600-0.552104.324902.75650K562IGF2BP3
FANCBENSG00000181544.997.51570206.71450-1.083904.955603.66230K562KRR1
FANCBENSG00000181544.9375.04950480.90650-0.358702.360001.39310K562MAK16
FANCBENSG00000181544.9129.51860236.25080-0.867204.988403.79250K562METAP2
FANCBENSG00000181544.9734.934401005.09070-0.451603.458602.19500K562MSI2
FANCBENSG00000181544.9203.14450330.36230-0.701503.928802.32220K562NONO
FANCBENSG00000181544.9357.00930445.93090-0.320902.037201.38550K562NSUN2
FANCBENSG00000181544.9296.89450473.93890-0.674802.604701.41890K562PABPC1
FANCBENSG00000181544.9323.75240459.41570-0.504902.909401.31600K562PKM
FANCBENSG00000181544.9266.54470377.41060-0.501802.798501.97130K562PPIG
FANCBENSG00000181544.9219.72650326.41940-0.571002.442201.73630K562PRPF8
FANCBENSG00000181544.9352.37600524.37100-0.573504.926204.06390K562PTBP1
FANCBENSG00000181544.9549.684101028.82600-0.9043012.0724010.35680K562PUF60
FANCBENSG00000181544.9844.537401094.22600-0.373703.131301.99340K562PUM1
FANCBENSG00000181544.9699.269501072.21860-0.616705.705504.30950K562PUM2
FANCBENSG00000181544.9327.49150502.93460-0.618904.878603.72530K562RBM22
FANCBENSG00000181544.9364.28690529.22890-0.538803.734502.44300K562NELFE
FANCBENSG00000181544.9134.10500332.54070-1.310209.802108.24750K562RPS19
FANCBENSG00000181544.9168.54510327.84420-0.959904.010802.77610K562RPS3
FANCBENSG00000181544.9141.06500230.25170-0.706903.010601.99480K562SF3B1
FANCBENSG00000181544.9311.16450514.03260-0.724206.497605.42380K562SRSF1
FANCBENSG00000181544.9330.26980485.40130-0.555503.877002.59670K562SRSF5
FANCBENSG00000181544.9203.12470316.12640-0.638102.731101.72100K562SUPV3L1
FANCBENSG00000181544.9208.83040289.14570-0.469502.369201.60940K562SYNCRIP
FANCBENSG00000181544.9264.33160520.29010-0.977008.040306.75640K562TARDBP
FANCBENSG00000181544.9316.10710501.86400-0.666905.859904.59990K562TIA1
FANCBENSG00000181544.9138.05130230.38030-0.738802.341201.48520K562TIAL1
FANCBENSG00000181544.9634.13460473.410400.421602.369601.36900K562U2AF1
FANCBENSG00000181544.9327.51780472.83160-0.529804.667403.75930K562UPF1
FANCBENSG00000181544.9294.28070420.73870-0.515704.236303.20490K562WDR43
FANCBENSG00000181544.9216.20850340.59050-0.655603.727002.24820K562XRN2
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for FANCB is not available on ENCORE database.





11 RBPs can affect the splicing of FANCB :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SEFANCBENSG00000181544.9chrX-148629771486340814862624148628621486862614868796-0.150000.004040.06298excludedK562SF3B4
SEFANCBENSG00000181544.9chrX-148870441488716514882681148837021489110714891184-0.261000.000730.02457excludedK562AKAP8L
SEFANCBENSG00000181544.9chrX-148870441488716514882681148837021489110714891184-0.360000.000000.00004excludedK562AQR
SEFANCBENSG00000181544.9chrX-148870441488716514882681148837021489110714891184-0.638000.000000.00000excludedK562PUS1
SEFANCBENSG00000181544.9chrX-148870441488716514882681148837021489110714891184-0.310000.000640.09325excludedK562NSUN2
SEFANCBENSG00000181544.9chrX-148870441488716514882681148837021489110714891184-0.746000.000000.00000excludedK562U2AF1
SEFANCBENSG00000181544.9chrX-148870441488716514882681148837021489110714891184-0.351000.000040.00270excludedK562UTP18
SEFANCBENSG00000181544.9chrX-148870441488716514882681148837021489110714891184-0.585000.000000.00000excludedK562U2AF2
SEFANCBENSG00000181544.9chrX-148870441488716514882681148837021489110714891184-0.271000.000820.03260excludedK562HNRNPU
SEFANCBENSG00000181544.9chrX-148870441488716514882681148837021489110714891174-0.231000.002190.04920excludedK562RBM15
SEFANCBENSG00000181544.9chrX-148870441488716514882681148837021489110714891184-0.350000.000010.00054excludedK562AGGF1
A5SSFANCBENSG00000181544.9chrX-148870441488726314887233148872631488268114883702-0.467000.000780.04544shorterK562U2AF2
MXEFANCBENSG00000181544.9chrX-14887044148871651488723314887263148826811488370214891107148911840.227000.000440.010461includedK562U2AF1
MXEFANCBENSG00000181544.9chrX-14887044148871651488723314887263148826811488370214891107148911840.243000.000320.006491includedK562U2AF2

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for FANCB is not avaliable on ENCORE database.