CR1L

General Information

Gene Name : CR1L
Gene ID : ENSG00000197721.16
Essential Gene : No

Functions

Not Available

Localization

Not Available

Domains (AlphaFold: CR1L)

Not Available

Antibody Validation

Not Avaiable

Expression Level in Cell lines

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID
Gm12878	CR1L	ENSG00000197721.16	0.00	0.00	0.00	ENCSR000AEF
HepG2	CR1L	ENSG00000197721.16	0.00	0.00	0.00	ENCSR985KAT
K562	CR1L	ENSG00000197721.16	36.94	24.86	30.90	ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.

eCLIP

No eCLIP experiment available

Antibody Validation

No Antibody Primary Validation image or Secondary image available

KD RNA-Seq

No KD RNA-Seq experiment available

RNA Bind-n-Seqn

No RBNS experiment available

Localization Image in HepG2

No Localization Information available

RBP	Antibody Info	Primary-HepG2	Secondary-HepG2	Primary-K562	Secondary-K562	Primary-UBERON	Primary-Hela

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for CR1L is not avaliable on ENCORE database.

Proteins bound to RNA

CR1L RNA is bound by 23 proteins.

eCLIP assay for CR1L is not avaliable on ENCORE database.

23 proteins are bound to CR1L RNA:

Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr1	207891020	207891068	+	3'-UTR,CDS,intron-Proximal	5.14934	7.21051	K562	PRPF8
chr1	207897006	207897074	+	3'-UTR,CDS,intron-Proximal	6.25065	18.51095	K562	PRPF8
chr1	207867727	207867807	+	CDS,intron-Distal	3.39233	4.37145	K562	GRWD1
chr1	207818586	207818675	+	CDS	3.69259	7.10700	K562	PCBP1
chr1	207881605	207881667	+	CDS,intron-Distal,intron-Proximal	4.89339	6.08021	K562	PRPF8
chr1	207851554	207851607	+	CDS	3.09339	3.07497	K562	SND1
chr1	207851607	207851643	+	CDS,intron-Proximal	4.47616	4.42935	K562	SND1
chr1	207857279	207857336	+	CDS,intron-Proximal	3.06438	4.36251	K562	PRPF8
chr1	207871217	207871230	+	CDS,intron-Distal,intron-Proximal	3.69359	4.63311	K562	AQR
chr1	207862531	207862594	+	intron-Distal	4.83017	27.28828	K562	KHSRP
chr1	207872481	207872527	+	intron-Distal,intron-Proximal	5.26536	6.90654	K562	SF3B4
chr1	207862751	207862792	+	intron-Distal	3.65571	13.38263	K562	KHSRP
chr1	207857369	207857447	+	intron-Distal,intron-Proximal	4.83282	7.12263	K562	TIA1
chr1	207863252	207863276	+	intron-Distal	4.06255	12.43181	K562	KHSRP
chr1	207862878	207862931	+	intron-Distal	4.31429	21.23330	K562	KHSRP
chr1	207861042	207861096	+	intron-Distal	3.13210	13.11441	K562	KHSRP
chr1	207859166	207859249	+	intron-Distal	4.09106	22.75825	K562	ILF3
chr1	207859564	207859621	+	intron-Distal	5.64442	47.26597	K562	ILF3
chr1	207859562	207859619	+	intron-Distal	4.60785	24.20674	K562	CSTF2T
chr1	207859087	207859164	+	intron-Distal	3.41519	9.05041	K562	CSTF2T
chr1	207859732	207859767	+	intron-Distal	4.28769	18.36346	K562	ILF3
chr1	207818866	207818930	+	intron-Distal	4.16750	8.81047	K562	HNRNPM
chr1	207902856	207902951	+	intron-Distal	4.98910	15.50560	K562	CSTF2T
chr1	207864859	207864938	+	intron-Distal	5.34686	22.83413	K562	KHSRP
chr1	207818947	207819025	+	intron-Distal	4.90290	13.90521	K562	HNRNPM
chr1	207859086	207859156	+	intron-Distal	4.45668	20.90427	K562	ILF3
chr1	207819137	207819285	+	intron-Distal	4.81890	22.16550	K562	HNRNPM
chr1	207862668	207862775	+	intron-Distal	5.58528	41.86509	K562	TARDBP
chr1	207872930	207873038	+	intron-Distal	3.43317	3.98203	K562	MATR3
chr1	207862931	207862979	+	intron-Distal	5.10273	19.72682	K562	KHSRP
chr1	207867563	207867598	+	intron-Distal	4.44256	4.37030	K562	KHSRP
chr1	207867117	207867169	+	intron-Distal	4.17374	4.10688	K562	KHSRP
chr1	207867331	207867429	+	intron-Distal	3.78392	5.26795	K562	QKI
chr1	207818814	207818894	+	intron-Distal	3.25984	5.02053	K562	EXOSC5
chr1	207833273	207833430	+	intron-Distal	4.85367	7.72686	K562	ILF3
chr1	207863067	207863127	+	intron-Distal	4.45053	16.34846	K562	KHSRP
chr1	207864747	207864767	+	intron-Distal	4.39777	17.23859	K562	KHSRP
chr1	207859698	207859715	+	intron-Distal	4.06382	14.77550	K562	ILF3
chr1	207892749	207892832	+	intron-Distal	4.28060	4.07991	K562	ILF3
chr1	207865239	207865379	+	intron-Distal	3.91676	3.45225	K562	GRWD1
chr1	207861135	207861190	+	intron-Distal	5.55291	43.15455	K562	KHSRP
chr1	207859179	207859239	+	intron-Distal	5.85009	15.60039	K562	CSTF2T
chr1	207871243	207871328	+	intron-Distal,intron-Proximal	3.20487	9.97041	K562	EFTUD2
chr1	207859527	207859560	+	intron-Distal	4.76357	6.09301	K562	CSTF2T
chr1	207867538	207867563	+	intron-Distal	3.81662	3.26999	K562	KHSRP
chr1	207862826	207862872	+	intron-Distal	3.61471	10.84776	K562	KHSRP
chr1	207870761	207870824	+	intron-Distal,intron-Proximal	3.02255	6.62024	K562	KHSRP
chr1	207859506	207859564	+	intron-Distal	5.87356	25.35086	K562	ILF3
chr1	207818768	207818864	+	intron-Distal,intron-Proximal	3.41389	6.54247	K562	NONO
chr1	207859631	207859684	+	intron-Distal	5.42613	11.62791	K562	CSTF2T
chr1	207865128	207865169	+	intron-Distal	4.36035	9.73136	K562	KHSRP
chr1	207859769	207859818	+	intron-Distal	3.72391	10.29116	K562	CSTF2T
chr1	207870707	207870761	+	intron-Distal,intron-Proximal	5.15298	8.94695	K562	KHSRP
chr1	207863218	207863266	+	intron-Distal	4.39744	5.69458	K562	CPEB4
chr1	207859621	207859698	+	intron-Distal	4.89949	25.46466	K562	ILF3
chr1	207864604	207864655	+	intron-Distal	4.83942	24.29181	K562	KHSRP
chr1	207864570	207864604	+	intron-Distal	4.43333	20.85711	K562	KHSRP
chr1	207885777	207885834	+	intron-Distal	3.88967	4.94630	K562	QKI
chr1	207818769	207818868	+	intron-Distal,intron-Proximal	3.65430	3.35564	K562	FUS
chr1	207859717	207859732	+	intron-Distal	4.49496	20.64845	K562	ILF3
chr1	207885845	207885887	+	intron-Distal	4.26711	3.18052	K562	QKI
chr1	207823354	207823458	+	intron-Distal	5.07156	8.14280	K562	TARDBP
chr1	207863276	207863303	+	intron-Distal	3.39190	8.90469	K562	KHSRP
chr1	207842924	207842990	+	intron-Distal,intron-Proximal	3.56441	5.10104	K562	NONO
chr1	207862632	207862679	+	intron-Distal	3.71326	12.35692	K562	KHSRP
chr1	207872748	207872884	+	intron-Distal	3.69850	13.83194	K562	KHSRP
chr1	207818947	207819015	+	intron-Distal	3.71637	4.51839	K562	EWSR1
chr1	207819127	207819243	+	intron-Distal	3.86168	8.36935	K562	FUS
chr1	207860062	207860104	+	intron-Distal	3.01278	5.82594	K562	KHSRP
chr1	207864698	207864713	+	intron-Distal	4.55268	19.44968	K562	KHSRP
chr1	207859567	207859615	+	intron-Distal	3.73373	3.58455	K562	U2AF2
chr1	207882384	207882450	+	intron-Distal	4.38255	9.29751	K562	KHSRP
chr1	207859870	207859889	+	intron-Distal	3.26954	3.40404	K562	CSTF2T
chr1	207862679	207862751	+	intron-Distal	4.04992	21.21863	K562	KHSRP
chr1	207862274	207862286	+	intron-Distal	3.72628	11.26860	K562	KHSRP
chr1	207856438	207856523	+	intron-Distal	5.76696	18.26852	K562	PTBP1
chr1	207819164	207819280	+	intron-Distal	3.03709	5.26430	K562	NONO
chr1	207863767	207863805	+	intron-Distal	3.11945	7.14496	K562	KHSRP
chr1	207860068	207860129	+	intron-Distal	4.13807	16.94635	K562	ILF3
chr1	207861291	207861374	+	intron-Distal	3.22635	7.71147	K562	TIA1
chr1	207862454	207862531	+	intron-Distal	4.09873	29.00156	K562	KHSRP
chr1	207859684	207859763	+	intron-Distal	3.74798	9.94723	K562	CSTF2T
chr1	207860073	207860135	+	intron-Distal	4.05071	14.48485	K562	CSTF2T
chr1	207861049	207861101	+	intron-Distal	4.53078	5.94830	K562	TIA1
chr1	207861190	207861226	+	intron-Distal	3.61409	7.08481	K562	KHSRP
chr1	207864423	207864486	+	intron-Distal	3.41241	12.47134	K562	KHSRP
chr1	207859506	207859612	+	intron-Distal	5.39963	43.99568	K562	PCBP1
chr1	207864549	207864570	+	intron-Distal	3.67922	10.61601	K562	KHSRP
chr1	207859565	207859614	+	intron-Distal	3.63036	3.86715	K562	HNRNPK
chr1	207843209	207843274	+	intron-Distal	3.31778	3.84725	K562	NONO
chr1	207859767	207859778	+	intron-Distal	4.59673	18.68181	K562	ILF3
chr1	207862286	207862320	+	intron-Distal	4.07971	15.29798	K562	KHSRP
chr1	207859520	207859565	+	intron-Distal	4.63960	11.94954	K562	PTBP1
chr1	207863476	207863527	+	intron-Distal	3.43964	4.09326	K562	PTBP1
chr1	207863818	207863847	+	intron-Distal	4.40906	10.06297	K562	KHSRP
chr1	207866475	207866558	+	intron-Distal	3.67140	4.96675	K562	TIA1
chr1	207872934	207873037	+	intron-Distal	6.39491	63.52492	K562	PTBP1
chr1	207863863	207863892	+	intron-Distal	3.95855	11.56896	K562	KHSRP
chr1	207860135	207860237	+	intron-Distal	4.69985	24.84811	K562	CSTF2T
chr1	207866964	207867082	+	intron-Distal	4.28875	13.29358	K562	KHSRP
chr1	207859355	207859405	+	intron-Distal	3.16655	7.12738	K562	ILF3
chr1	207861096	207861106	+	intron-Distal	3.44588	8.87792	K562	KHSRP
chr1	207859357	207859404	+	intron-Distal	3.08028	9.97070	K562	PTBP1
chr1	207864713	207864747	+	intron-Distal	4.56634	23.69139	K562	KHSRP
chr1	207884191	207884314	+	intron-Distal	4.02156	4.00320	K562	AQR
chr1	207864767	207864817	+	intron-Distal	5.17802	19.74910	K562	KHSRP
chr1	207863459	207863528	+	intron-Distal	3.39014	4.00685	K562	TIA1
chr1	207819025	207819120	+	intron-Distal	4.79282	11.60984	K562	HNRNPM
chr1	207859565	207859609	+	intron-Distal	3.88270	11.31245	K562	PTBP1
chr1	207818928	207819027	+	intron-Distal	4.05554	4.56225	K562	FUS
chr1	207859778	207859823	+	intron-Distal	6.28838	22.64763	K562	ILF3
chr1	207819285	207819349	+	intron-Distal	5.11656	8.94476	K562	HNRNPM
chr1	207857354	207857439	+	intron-Distal,intron-Proximal	3.28909	7.89276	K562	CSTF2T
chr1	207861106	207861135	+	intron-Distal	4.35681	17.15078	K562	KHSRP
chr1	207891036	207891094	+	intron-Proximal	5.54007	6.83960	K562	AQR
chr1	207857328	207857369	+	intron-Proximal	4.44788	3.98488	K562	TIA1
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

eCLIP assay for CR1L is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout assay for CR1L is not available on ENCORE database.
68 RBPs can affect the levels of CR1L.

The Knockdown/knockout RNA-Seq assay for CR1L is not available on ENCORE database.

68 RBPs can affect the gene expression of CR1L :

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
CR1L	ENSG00000197721.12	1002.01630	594.30820	0.75350	8.55380	6.43220	K562	ABCF1
CR1L	ENSG00000197721.12	838.97100	616.32970	0.44480	4.51490	3.82190	K562	AGGF1
CR1L	ENSG00000197721.12	538.69310	408.86360	0.39770	3.15930	1.52910	K562	AKAP1
CR1L	ENSG00000197721.12	1200.87260	641.30460	0.90490	13.59460	11.98040	K562	AKAP8L
CR1L	ENSG00000197721.12	593.77030	424.99400	0.48240	4.10470	2.45280	K562	BCCIP
CR1L	ENSG00000197721.12	617.13240	410.68690	0.58740	6.27510	4.80510	K562	BCLAF1
CR1L	ENSG00000197721.12	557.87800	736.59460	-0.40090	3.37820	2.05820	K562	CCDC124
CR1L	ENSG00000197721.12	674.29150	487.11360	0.46900	3.73840	1.96170	K562	CEBPZ
CR1L	ENSG00000197721.12	604.49160	421.19820	0.52110	3.90210	2.36860	K562	CIRBP
CR1L	ENSG00000197721.12	1112.17120	493.78260	1.17130	10.24720	8.18760	K562	CNOT7
CR1L	ENSG00000197721.12	2010.02460	1128.22320	0.83310	15.51800	13.36890	K562	CELF1
CR1L	ENSG00000197721.12	756.59950	559.90580	0.43420	3.70780	2.30610	K562	DDX21
CR1L	ENSG00000197721.12	561.45480	670.97550	-0.25710	1.86450	1.30990	K562	DDX47
CR1L	ENSG00000197721.12	438.80410	690.18000	-0.65340	8.17950	6.53240	K562	DKC1
CR1L	ENSG00000197721.12	198.80840	344.29330	-0.79230	5.49060	3.59310	K562	DNAJC21
CR1L	ENSG00000197721.12	561.12370	354.44400	0.66270	4.92250	3.68900	K562	EFTUD2
CR1L	ENSG00000197721.12	254.09740	515.60270	-1.02090	13.75600	12.33740	K562	EIF2S2
CR1L	ENSG00000197721.12	203.89260	325.67010	-0.67560	2.53580	1.57660	K562	EIF3A
CR1L	ENSG00000197721.12	247.58790	432.82650	-0.80580	6.90310	5.61510	K562	EIF4A3
CR1L	ENSG00000197721.12	522.80120	377.81400	0.46850	3.45630	1.98390	K562	EWSR1
CR1L	ENSG00000197721.12	559.72330	427.23560	0.38960	2.35950	1.57660	K562	FIP1L1
CR1L	ENSG00000197721.12	252.10320	352.66200	-0.48430	2.25980	1.43810	K562	FTO
CR1L	ENSG00000197721.12	358.74350	450.12150	-0.32740	1.87930	1.36160	K562	FXR1
CR1L	ENSG00000197721.12	545.90030	375.72880	0.53880	4.19330	2.39930	K562	G3BP1
CR1L	ENSG00000197721.12	891.94440	523.87020	0.76760	11.76950	9.59170	K562	GLRX3
CR1L	ENSG00000197721.12	733.54320	365.72930	1.00400	2.59600	1.42600	K562	HNRNPA2B1
CR1L	ENSG00000197721.12	183.39680	351.42190	-0.93820	6.32570	4.83330	K562	HNRNPM
CR1L	ENSG00000197721.12	894.52520	644.09690	0.47370	3.31240	2.33640	K562	HNRNPU
CR1L	ENSG00000197721.12	295.54830	579.22050	-0.97070	10.10540	8.61010	K562	HSPD1
CR1L	ENSG00000197721.12	821.77390	393.01860	1.06400	7.27120	5.29650	K562	IGF2BP2
CR1L	ENSG00000197721.12	530.65490	412.18220	0.36440	2.30690	1.47080	K562	MATR3
CR1L	ENSG00000197721.12	799.00600	550.77870	0.53660	6.48420	5.29430	K562	MTPAP
CR1L	ENSG00000197721.12	859.85860	534.43600	0.68600	4.78730	3.52400	K562	NAA15
CR1L	ENSG00000197721.12	955.63270	611.97840	0.64290	11.61520	10.23010	K562	NSUN2
CR1L	ENSG00000197721.12	632.07270	319.69030	0.98330	3.17220	2.09210	K562	PABPN1
CR1L	ENSG00000197721.12	559.10990	367.48450	0.60530	4.79580	3.50000	K562	PCBP2
CR1L	ENSG00000197721.12	964.42390	697.41480	0.46760	3.33860	2.42520	K562	PCBP3
CR1L	ENSG00000197721.12	673.91700	534.95540	0.33310	2.19160	1.47920	K562	POLR2G
CR1L	ENSG00000197721.12	252.14740	344.91840	-0.45200	2.13910	1.47630	K562	PRPF8
CR1L	ENSG00000197721.12	259.25410	396.78620	-0.61400	3.79230	2.70960	K562	PSIP1
CR1L	ENSG00000197721.12	526.10530	1000.73640	-0.92760	9.08840	7.59590	K562	PUF60
CR1L	ENSG00000197721.12	760.75610	1064.80890	-0.48510	3.43990	2.24130	K562	PUM1
CR1L	ENSG00000197721.12	735.15380	1042.92550	-0.50450	2.52630	1.60720	K562	PUM2
CR1L	ENSG00000197721.12	1515.85760	636.10130	1.25270	24.08040	22.48950	K562	PUS1
CR1L	ENSG00000197721.12	451.35940	289.96580	0.63830	2.85560	1.41160	K562	RAVER1
CR1L	ENSG00000197721.12	1046.76430	619.69940	0.75620	11.60740	10.40380	K562	RBM15
CR1L	ENSG00000197721.12	554.55440	384.76690	0.52720	3.95060	2.93060	K562	RBM22
CR1L	ENSG00000197721.12	433.24870	288.10310	0.58850	4.25770	2.55470	K562	RBM25
CR1L	ENSG00000197721.12	177.92490	351.23660	-0.98120	5.84300	4.65050	K562	RPS19
CR1L	ENSG00000197721.12	725.65270	449.85150	0.68970	3.73100	1.89700	K562	SBDS
CR1L	ENSG00000197721.12	454.54860	295.06300	0.62330	3.08960	1.42820	K562	SERBP1
CR1L	ENSG00000197721.12	889.08260	603.84590	0.55800	7.05310	5.79580	K562	SF3A3
CR1L	ENSG00000197721.12	476.68220	315.87030	0.59360	5.01250	3.84480	K562	SF3B4
CR1L	ENSG00000197721.12	512.54020	352.62020	0.53940	3.78520	2.28940	K562	SLBP
CR1L	ENSG00000197721.12	1026.85580	618.65130	0.73090	14.04640	12.15400	K562	SRPK2
CR1L	ENSG00000197721.12	302.96220	393.39090	-0.37680	1.90070	1.30210	K562	SRSF1
CR1L	ENSG00000197721.12	767.82590	499.71480	0.61960	7.51660	5.58490	K562	SRSF7
CR1L	ENSG00000197721.12	1150.84640	873.12620	0.39830	3.36700	1.71190	K562	SUCLG1
CR1L	ENSG00000197721.12	273.45380	536.55430	-0.97240	11.75200	10.06650	K562	SYNCRIP
CR1L	ENSG00000197721.12	539.81870	398.13160	0.43910	2.15050	1.52170	K562	TARDBP
CR1L	ENSG00000197721.12	513.08680	376.87520	0.44500	2.62660	1.56670	K562	TRA2A
CR1L	ENSG00000197721.12	619.50930	405.56050	0.61110	5.10930	3.72860	K562	TRIM56
CR1L	ENSG00000197721.12	945.66320	688.91030	0.45690	5.37980	3.60200	K562	TROVE2
CR1L	ENSG00000197721.12	624.14720	353.34940	0.82070	7.25230	5.52570	K562	UCHL5
CR1L	ENSG00000197721.12	403.71830	648.89260	-0.68460	8.55350	7.37620	K562	UPF1
CR1L	ENSG00000197721.12	891.29700	555.23870	0.68270	8.30790	6.75110	K562	WDR3
CR1L	ENSG00000197721.12	813.01980	577.37150	0.49370	6.34890	5.11720	K562	WDR43
CR1L	ENSG00000197721.12	1195.85270	842.70550	0.50480	5.50320	3.68310	K562	WRN
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

The Knockdown/knockout RNA-Seq assay for CR1L is not available on ENCORE database.

4 RBPs can affect the splicing of CR1L :

Event Type	Gene Name	Gene ID	chr	Strand	ExonStart	ExonEnd	upstreamES	upstreamEE	downstreamES	downstreamEE	dPSI	p-value	FDR	is_included	Cell Line	Affected by RBP
SE	CR1L	ENSG00000197721.12	chr1	+	207859038	207859106	207857216	207857302	207860135	207860285	0.64100	0.00160	0.05674	included	K562	FXR1
SE	CR1L	ENSG00000197721.12	chr1	+	207859038	207859106	207857216	207857302	207860135	207860285	-0.38700	0.00001	0.00281	excluded	K562	SRSF7
SE	CR1L	ENSG00000197721.12	chr1	+	207860135	207860285	207857216	207857302	207867697	207868096	-0.41600	0.00122	0.04389	excluded	K562	HNRNPU
A5SS	CR1L	ENSG00000197721.12	chr1	+	207818457	207818675	207818457	207818462	207850733	207850913	0.06400	0.00188	0.06485	longer	K562	PUS1

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

CR1L

General Information

Functions

Localization

Domains (AlphaFold: CR1L)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for CR1L is not avaliable on ENCORE database.

23 proteins are bound to CR1L RNA:

eCLIP assay for CR1L is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for CR1L is not available on ENCORE database.

68 RBPs can affect the gene expression of CR1L :

The Knockdown/knockout RNA-Seq assay for CR1L is not available on ENCORE database.

4 RBPs can affect the splicing of CR1L :

The Knockdown/knockout RNA-Seq assay for CR1L is not avaliable on ENCORE database.