CLK2

General Information

Gene Name : CLK2
Gene ID : ENSG00000176444.18
Essential Gene : No

Functions

Not Available

Localization

Not Available

Domains (AlphaFold: CLK2)

Not Available

Antibody Validation

Not Avaiable

Expression Level in Cell lines

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID
Gm12878	CLK2	ENSG00000176444.18	35.08	37.34	36.21	ENCSR000AEF
HepG2	CLK2	ENSG00000176444.18	47.63	35.16	41.39	ENCSR985KAT
K562	CLK2	ENSG00000176444.18	43.29	45.26	44.27	ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.

eCLIP

No eCLIP experiment available

Antibody Validation

No Antibody Primary Validation image or Secondary image available

KD RNA-Seq

No KD RNA-Seq experiment available

RNA Bind-n-Seqn

No RBNS experiment available

Localization Image in HepG2

No Localization Information available

RBP	Antibody Info	Primary-HepG2	Secondary-HepG2	Primary-K562	Secondary-K562	Primary-UBERON	Primary-Hela

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for CLK2 is not avaliable on ENCORE database.

Proteins bound to RNA

CLK2 RNA is bound by 31 proteins.

eCLIP assay for CLK2 is not avaliable on ENCORE database.

31 proteins are bound to CLK2 RNA:

Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr1	155232757	155232876	-	3'-UTR,intron-Distal,intron-Proximal	3.56241	5.11124	K562	DDX6
chr1	155232788	155232817	-	3'-UTR,intron-Distal	5.73482	400.00000	K562	PUM2
chr1	155232759	155232843	-	3'-UTR,intron-Distal	3.66312	7.94000	HepG2	PABPN1
chr1	155232747	155232788	-	3'-UTR,intron-Distal	5.07939	57.45972	K562	PUM2
chr1	155232852	155232931	-	3'-UTR,intron-Distal,intron-Proximal	5.88415	400.00000	K562	PUM2
chr1	155232751	155232808	-	3'-UTR,intron-Distal	4.37602	6.16495	HepG2	DDX55
chr1	155232767	155232824	-	3'-UTR,intron-Distal	3.98478	6.09867	K562	PUM1
chr1	155232817	155232852	-	3'-UTR,intron-Distal	5.77272	87.06457	K562	PUM2
chr1	155243134	155243183	-	5'-UTR,intron-Distal,intron-Proximal	3.71123	4.20198	HepG2	FAM120A
chr1	155242991	155243034	-	5'-UTR,intron-Distal	3.03598	6.80995	K562	ZNF622
chr1	155243029	155243110	-	5'-UTR,intron-Distal,intron-Proximal	3.22954	6.98923	K562	UCHL5
chr1	155242991	155243038	-	5'-UTR,intron-Distal	5.33745	12.45999	K562	DDX24
chr1	155243179	155243253	-	5'-UTR,intron-Distal,intron-Proximal	3.93369	6.49292	HepG2	CSTF2T
chr1	155242998	155243155	-	5'-UTR,intron-Distal,intron-Proximal	3.89741	45.83422	K562	GEMIN5
chr1	155243030	155243128	-	5'-UTR,intron-Distal,intron-Proximal	3.03059	11.13696	HepG2	EFTUD2
chr1	155243173	155243217	-	5'-UTR,intron-Distal,intron-Proximal	3.71217	5.67615	K562	GTF2F1
chr1	155243049	155243098	-	5'-UTR,intron-Distal,intron-Proximal	3.04381	8.13782	HepG2	DDX3X
chr1	155243030	155243215	-	5'-UTR,intron-Distal,intron-Proximal	5.16855	32.25357	HepG2	GTF2F1
chr1	155243038	155243101	-	5'-UTR,intron-Distal,intron-Proximal	4.28580	18.72520	K562	DDX24
chr1	155242998	155243021	-	5'-UTR,intron-Distal	3.51196	6.23791	HepG2	PRPF4
chr1	155243029	155243105	-	5'-UTR,intron-Distal,intron-Proximal	3.85738	29.67270	K562	PRPF8
chr1	155243028	155243218	-	5'-UTR,intron-Distal,intron-Proximal	4.07257	17.75476	HepG2	PCBP2
chr1	155243002	155243108	-	5'-UTR,intron-Distal,intron-Proximal	3.76523	8.22088	K562	DDX6
chr1	155243189	155243225	-	5'-UTR,intron-Distal,intron-Proximal	5.01408	6.78736	HepG2	PRPF4
chr1	155243017	155243115	-	5'-UTR,intron-Distal,intron-Proximal	3.77369	7.96348	HepG2	NCBP2
chr1	155243021	155243111	-	5'-UTR,intron-Distal,intron-Proximal	6.31091	63.64260	HepG2	PRPF4
chr1	155243032	155243186	-	5'-UTR,intron-Distal,intron-Proximal	3.52411	21.91546	HepG2	RBFOX2
chr1	155243008	155243028	-	5'-UTR,intron-Distal	3.09308	4.12887	HepG2	GRWD1
chr1	155242991	155243033	-	5'-UTR,intron-Distal	4.35015	4.01425	K562	AKAP8L
chr1	155243031	155243110	-	5'-UTR,intron-Distal,intron-Proximal	3.42784	7.02876	K562	DROSHA
chr1	155243027	155243090	-	5'-UTR,intron-Distal,intron-Proximal	3.69754	4.98411	K562	RBM15
chr1	155243130	155243189	-	5'-UTR,intron-Distal,intron-Proximal	6.70108	28.25948	HepG2	PRPF4
chr1	155243188	155243282	-	5'-UTR,intron-Distal,intron-Proximal	4.48714	3.45994	HepG2	NCBP2
chr1	155243118	155243151	-	5'-UTR,intron-Distal,intron-Proximal	3.19359	4.18431	K562	DDX24
chr1	155243081	155243134	-	5'-UTR,intron-Distal,intron-Proximal	3.34145	13.98632	HepG2	FAM120A
chr1	155242991	155243177	-	5'-UTR,intron-Distal,intron-Proximal	3.81990	19.99762	K562	RBFOX2
chr1	155243029	155243157	-	5'-UTR,intron-Distal,intron-Proximal	4.96995	47.65673	K562	GTF2F1
chr1	155239317	155239390	-	CDS,intron-Distal	4.04017	16.34011	HepG2	GRWD1
chr1	155236477	155236525	-	CDS,intron-Distal,intron-Proximal	4.17202	15.11890	HepG2	PRPF8
chr1	155238479	155238543	-	CDS,intron-Distal,intron-Proximal	4.63271	13.23869	HepG2	GRWD1
chr1	155236643	155236665	-	CDS,intron-Distal	4.01593	4.41267	HepG2	PPIG
chr1	155233744	155233774	-	CDS,intron-Distal	4.38441	8.74054	HepG2	PPIG
chr1	155233704	155233769	-	CDS,intron-Distal,intron-Proximal	4.95876	6.57024	HepG2	AQR
chr1	155240720	155240760	-	CDS,intron-Distal,intron-Proximal	3.39016	4.85880	HepG2	PPIG
chr1	155238086	155238118	-	CDS,intron-Distal	3.08712	6.49271	HepG2	GRWD1
chr1	155240700	155240751	-	CDS,intron-Distal,intron-Proximal	3.60452	3.40338	K562	DDX24
chr1	155235733	155235741	-	CDS,intron-Distal	4.25578	3.71613	K562	UCHL5
chr1	155236533	155236598	-	CDS,intron-Distal	3.58112	9.03599	HepG2	GRWD1
chr1	155237799	155237806	-	CDS,intron-Distal,intron-Proximal	3.09193	3.72946	HepG2	PPIG
chr1	155239310	155239389	-	CDS,intron-Distal	3.69538	4.58459	K562	GRWD1
chr1	155237800	155237875	-	CDS,intron-Distal,intron-Proximal	4.05032	18.34657	K562	ZNF622
chr1	155240712	155240781	-	CDS,intron-Distal,intron-Proximal	3.93638	11.42383	HepG2	U2AF2
chr1	155237875	155237917	-	CDS,intron-Distal,intron-Proximal	3.11104	9.85730	K562	ZNF622
chr1	155237831	155237877	-	CDS,intron-Distal,intron-Proximal	3.58630	8.31208	HepG2	PPIG
chr1	155237824	155237884	-	CDS,intron-Distal,intron-Proximal	3.21437	7.66756	HepG2	GRWD1
chr1	155239229	155239296	-	CDS,intron-Distal,intron-Proximal	3.40351	24.09651	HepG2	PRPF8
chr1	155236522	155236546	-	CDS,intron-Distal	3.19092	6.17838	K562	ZNF622
chr1	155236676	155236727	-	CDS,intron-Distal,intron-Proximal	4.53584	7.50107	K562	AQR
chr1	155239240	155239291	-	CDS,intron-Distal,intron-Proximal	3.39897	6.46098	HepG2	AQR
chr1	155240743	155240811	-	CDS,intron-Distal,intron-Proximal	3.26427	9.49963	K562	AQR
chr1	155240716	155240772	-	CDS,intron-Distal,intron-Proximal	3.51558	7.67822	HepG2	PRPF4
chr1	155234515	155234585	-	CDS,intron-Distal,intron-Proximal	3.01703	6.08644	HepG2	BUD13
chr1	155238149	155238222	-	CDS,intron-Distal,intron-Proximal	3.67502	12.36261	HepG2	SF3A3
chr1	155236520	155236573	-	CDS,intron-Distal	3.84031	6.77066	K562	UCHL5
chr1	155238146	155238261	-	CDS,intron-Distal,intron-Proximal	3.13786	10.50890	HepG2	PCBP2
chr1	155237884	155237917	-	CDS,intron-Distal,intron-Proximal	3.26347	8.31377	HepG2	GRWD1
chr1	155237818	155237897	-	CDS,intron-Distal,intron-Proximal	3.95574	16.11202	K562	UCHL5
chr1	155234512	155234559	-	CDS,intron-Distal	3.69340	8.91541	K562	UCHL5
chr1	155237816	155237893	-	CDS,intron-Distal,intron-Proximal	3.88690	3.94400	HepG2	UCHL5
chr1	155240693	155240763	-	CDS,intron-Distal,intron-Proximal	3.29478	9.07205	HepG2	GRWD1
chr1	155234507	155234566	-	CDS,intron-Distal,intron-Proximal	3.80394	7.15529	HepG2	PPIG
chr1	155233731	155233763	-	CDS,intron-Distal,intron-Proximal	4.95055	9.10443	HepG2	PRPF8
chr1	155238144	155238223	-	CDS,intron-Distal,intron-Proximal	5.56836	8.49281	HepG2	SF3B4
chr1	155237806	155237831	-	CDS,intron-Distal,intron-Proximal	3.82217	7.87154	HepG2	PPIG
chr1	155239341	155239382	-	CDS,intron-Distal	3.40520	8.10543	K562	UCHL5
chr1	155239313	155239378	-	CDS,intron-Distal	3.12533	10.12596	K562	ZNF622
chr1	155234062	155234112	-	CDS,intron-Distal,intron-Proximal	3.08567	4.85249	HepG2	U2AF2
chr1	155238096	155238151	-	CDS,intron-Distal,intron-Proximal	3.08529	8.80090	HepG2	U2AF2
chr1	155235650	155235695	-	CDS,intron-Distal,intron-Proximal	3.35130	3.28107	HepG2	PABPN1
chr1	155239390	155239439	-	CDS,intron-Distal	4.30178	8.48059	HepG2	GRWD1
chr1	155237809	155237893	-	CDS,intron-Distal,intron-Proximal	5.31079	12.16150	K562	GRWD1
chr1	155238041	155238078	-	intron-Distal,intron-Proximal	5.19963	7.23718	K562	AQR
chr1	155238310	155238364	-	intron-Distal	4.46386	5.73820	HepG2	XRCC6
chr1	155239262	155239279	-	intron-Distal,intron-Proximal	3.64973	12.33018	K562	AQR
chr1	155238886	155238971	-	intron-Distal,intron-Proximal	3.61342	5.03432	K562	GRWD1
chr1	155233882	155233934	-	intron-Distal,intron-Proximal	3.77413	6.98930	HepG2	U2AF2
chr1	155234409	155234435	-	intron-Distal,intron-Proximal	4.11056	5.93840	HepG2	PRPF8
chr1	155242760	155242784	-	intron-Distal	3.81979	3.52230	K562	AQR
chr1	155238174	155238215	-	intron-Distal,intron-Proximal	3.22058	3.41227	K562	UCHL5
chr1	155239210	155239272	-	intron-Distal,intron-Proximal	4.15033	9.54479	HepG2	EFTUD2
chr1	155238302	155238358	-	intron-Distal	5.78923	7.00239	K562	XRCC6
chr1	155233703	155233731	-	intron-Distal,intron-Proximal	5.93374	10.43516	HepG2	PRPF8
chr1	155238151	155238210	-	intron-Distal,intron-Proximal	3.72067	10.40504	HepG2	U2AF2
chr1	155238368	155238379	-	intron-Distal	4.47471	4.85612	K562	PRPF8
chr1	155238356	155238408	-	intron-Distal,intron-Proximal	3.42833	5.74981	HepG2	GRWD1
chr1	155238836	155238951	-	intron-Distal,intron-Proximal	3.38160	6.06579	K562	DROSHA
chr1	155239208	155239262	-	intron-Distal,intron-Proximal	4.09442	19.38001	K562	AQR
chr1	155238909	155238970	-	intron-Distal,intron-Proximal	4.03059	7.53528	HepG2	EFTUD2
chr1	155236511	155236520	-	intron-Distal,intron-Proximal	5.10459	11.82040	K562	AQR
chr1	155238180	155238204	-	intron-Distal,intron-Proximal	4.63681	5.42152	HepG2	GRWD1
chr1	155238154	155238233	-	intron-Distal,intron-Proximal	4.10275	19.07472	K562	SF3B4
chr1	155238449	155238497	-	intron-Distal,intron-Proximal	4.03867	7.30031	K562	AQR
chr1	155239204	155239271	-	intron-Distal,intron-Proximal	3.13368	6.42750	HepG2	GRWD1
chr1	155238938	155238969	-	intron-Distal,intron-Proximal	3.27624	3.59821	K562	UCHL5
chr1	155238676	155238738	-	intron-Distal,intron-Proximal	3.84719	7.71013	HepG2	PCBP2
chr1	155238678	155238727	-	intron-Distal,intron-Proximal	3.59031	6.87160	K562	AQR
chr1	155242876	155242911	-	intron-Distal	4.13273	3.93614	HepG2	AQR
chr1	155236011	155236131	-	intron-Distal	3.02364	3.20628	K562	HNRNPL
chr1	155238990	155239033	-	intron-Distal	3.87837	3.45219	HepG2	RBFOX2
chr1	155237922	155237975	-	intron-Distal,intron-Proximal	5.67971	11.60096	HepG2	AQR
chr1	155233691	155233740	-	intron-Distal,intron-Proximal	4.54985	4.48002	K562	AQR
chr1	155239218	155239277	-	intron-Distal,intron-Proximal	3.44481	6.05769	K562	ZNF622
chr1	155236475	155236511	-	intron-Distal,intron-Proximal	4.73863	13.24177	K562	AQR
chr1	155238859	155238918	-	intron-Distal,intron-Proximal	4.34345	9.66374	K562	BUD13
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

eCLIP assay for CLK2 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout assay for CLK2 is not available on ENCORE database.
60 RBPs can affect the levels of CLK2.

The Knockdown/knockout RNA-Seq assay for CLK2 is not available on ENCORE database.

60 RBPs can affect the gene expression of CLK2 :

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
CLK2	ENSG00000176444.14	1035.03300	735.96680	0.49190	2.87520	1.91810	HepG2	BCCIP
CLK2	ENSG00000176444.14	1081.82110	1335.34390	-0.30370	3.07350	2.40280	HepG2	CELF1
CLK2	ENSG00000176444.14	793.07460	963.09880	-0.28020	2.90890	2.05550	HepG2	DDX19B
CLK2	ENSG00000176444.14	997.57150	730.64950	0.44910	3.93110	2.77570	HepG2	DHX30
CLK2	ENSG00000176444.14	1652.46110	1411.96690	0.22680	2.00150	1.47220	HepG2	ETF1
CLK2	ENSG00000176444.14	754.34280	1017.59400	-0.43190	3.97890	2.97790	HepG2	EWSR1
CLK2	ENSG00000176444.14	1158.04310	811.98730	0.51210	4.97250	3.93190	HepG2	FUBP3
CLK2	ENSG00000176444.14	1381.44990	828.71920	0.73710	7.77580	6.68920	HepG2	G3BP1
CLK2	ENSG00000176444.14	1385.81120	1086.53940	0.35090	2.17280	1.60190	HepG2	GPKOW
CLK2	ENSG00000176444.14	959.43570	764.79960	0.32700	2.30170	1.70780	HepG2	HNRNPA1
CLK2	ENSG00000176444.14	677.76400	850.69920	-0.32790	2.06060	1.45150	HepG2	HNRNPC
CLK2	ENSG00000176444.14	1210.79570	839.40990	0.52840	4.90310	3.99430	HepG2	HNRNPK
CLK2	ENSG00000176444.14	1014.30070	845.07480	0.26320	2.36880	1.80470	HepG2	HNRNPU
CLK2	ENSG00000176444.14	1068.88600	863.21570	0.30820	3.72200	2.88440	HepG2	ILF2
CLK2	ENSG00000176444.14	879.10430	1189.88040	-0.43670	4.23640	3.24680	HepG2	MSI2
CLK2	ENSG00000176444.14	600.81190	855.49530	-0.50980	6.33060	5.47070	HepG2	PCBP1
CLK2	ENSG00000176444.14	1155.64350	979.20820	0.23890	2.09890	1.41730	HepG2	PRPF4
CLK2	ENSG00000176444.14	408.70880	558.07670	-0.44940	2.70290	1.90350	HepG2	PRPF8
CLK2	ENSG00000176444.14	1092.81980	1442.71990	-0.40070	6.76110	5.91880	HepG2	PUM1
CLK2	ENSG00000176444.14	1101.38440	1441.64970	-0.38840	3.99670	3.19530	HepG2	PUM2
CLK2	ENSG00000176444.14	850.88360	1060.67300	-0.31790	3.56900	2.88810	HepG2	PUS1
CLK2	ENSG00000176444.14	565.59060	863.51650	-0.61050	2.96420	2.23600	HepG2	RAVER1
CLK2	ENSG00000176444.14	972.26200	1180.11980	-0.27950	2.62330	2.11590	HepG2	RBM22
CLK2	ENSG00000176444.14	878.27280	1051.09690	-0.25920	1.88180	1.30640	HepG2	RPLP0
CLK2	ENSG00000176444.14	560.94510	709.20960	-0.33840	2.19200	1.63790	HepG2	RPS19
CLK2	ENSG00000176444.14	886.41740	752.57580	0.23600	1.98820	1.42730	HepG2	SAFB2
CLK2	ENSG00000176444.14	948.46910	1332.86090	-0.49090	6.54180	5.86130	HepG2	SRFBP1
CLK2	ENSG00000176444.14	571.21710	945.98160	-0.72780	11.89660	11.06290	HepG2	SRSF1
CLK2	ENSG00000176444.14	613.22260	425.48850	0.52720	3.43290	2.59220	HepG2	UCHL5
CLK2	ENSG00000176444.14	954.41410	659.48250	0.53320	2.70580	1.71180	HepG2	UPF2
CLK2	ENSG00000176444.14	1101.03480	709.08250	0.63470	5.30710	4.31070	HepG2	XRN2
CLK2	ENSG00000176444.14	1205.92780	1763.17980	-0.54800	10.55280	9.53890	K562	AGGF1
CLK2	ENSG00000176444.14	1557.00790	1937.43200	-0.31540	2.62780	1.67720	K562	AKAP8
CLK2	ENSG00000176444.14	1512.78180	1924.98280	-0.34760	4.24530	3.08840	K562	ATP5C1
CLK2	ENSG00000176444.14	1745.20880	2107.12550	-0.27190	2.56540	1.44080	K562	CCDC124
CLK2	ENSG00000176444.14	3267.48020	3962.46870	-0.27820	2.89120	1.89510	K562	CELF1
CLK2	ENSG00000176444.14	1872.52030	2825.39780	-0.59350	15.15030	13.74150	K562	DDX47
CLK2	ENSG00000176444.14	760.11060	1215.89350	-0.67770	4.04820	2.80530	K562	EIF3A
CLK2	ENSG00000176444.14	921.36060	1376.41980	-0.57910	4.67100	3.28450	K562	EIF3D
CLK2	ENSG00000176444.14	706.62750	863.17910	-0.28870	2.15190	1.44370	K562	EIF3G
CLK2	ENSG00000176444.14	1236.23520	1044.35710	0.24320	2.01250	1.48020	K562	FXR1
CLK2	ENSG00000176444.14	492.27590	839.87910	-0.77070	6.17200	5.02330	K562	G3BP2
CLK2	ENSG00000176444.14	970.37700	1288.82570	-0.40940	2.95890	1.48360	K562	GEMIN5
CLK2	ENSG00000176444.14	1159.26590	1808.87660	-0.64190	2.88910	1.63960	K562	HNRNPA2B1
CLK2	ENSG00000176444.14	1118.74980	1453.55520	-0.37770	3.45660	2.79950	K562	HNRNPC
CLK2	ENSG00000176444.14	1590.74020	1947.06360	-0.29160	2.18640	1.46320	K562	KIF1C
CLK2	ENSG00000176444.14	1496.42570	1863.79370	-0.31670	2.90360	1.79580	K562	MAK16
CLK2	ENSG00000176444.14	2601.20650	3435.35220	-0.40130	4.19550	2.80700	K562	MSI2
CLK2	ENSG00000176444.14	939.95930	1266.63850	-0.43030	3.19530	1.77750	K562	NONO
CLK2	ENSG00000176444.14	853.72410	1086.55490	-0.34790	2.99470	1.58890	K562	PCBP1
CLK2	ENSG00000176444.14	1801.03700	1419.04820	0.34380	3.05360	1.54550	K562	PHF6
CLK2	ENSG00000176444.14	1646.49820	1303.23810	0.33720	2.88130	1.95460	K562	PSIP1
CLK2	ENSG00000176444.14	3116.42260	3740.01440	-0.26320	2.56830	1.54170	K562	PUM1
CLK2	ENSG00000176444.14	591.76960	796.63650	-0.42890	3.52860	2.00370	K562	RBM25
CLK2	ENSG00000176444.14	632.07990	1274.25630	-1.01150	13.05720	11.25670	K562	RPS19
CLK2	ENSG00000176444.14	809.12000	1279.06790	-0.66070	5.02380	3.23010	K562	RRP9
CLK2	ENSG00000176444.14	1450.89880	1127.06690	0.36430	3.08930	1.99130	K562	SRFBP1
CLK2	ENSG00000176444.14	948.31480	1249.16540	-0.39750	3.15210	1.39650	K562	SRP68
CLK2	ENSG00000176444.14	843.11790	1058.67670	-0.32850	2.57090	1.88590	K562	SRSF1
CLK2	ENSG00000176444.14	1232.60160	1988.35830	-0.68990	3.01600	1.50870	K562	SUPT6H
CLK2	ENSG00000176444.14	888.34070	1211.21770	-0.44730	3.17660	2.08560	K562	SUPV3L1
CLK2	ENSG00000176444.14	1362.59880	1071.41230	0.34670	2.36150	1.70600	K562	TARDBP
CLK2	ENSG00000176444.14	700.66480	1104.09470	-0.65610	6.30980	3.88380	K562	TFIP11
CLK2	ENSG00000176444.14	2176.13120	2684.14150	-0.30270	4.26450	2.68730	K562	TROVE2
CLK2	ENSG00000176444.14	394.64070	814.12350	-1.04470	11.87890	9.42980	K562	U2AF1
CLK2	ENSG00000176444.14	441.83020	840.80990	-0.92830	14.63020	12.75810	K562	U2AF2
CLK2	ENSG00000176444.14	984.44560	1281.91840	-0.38090	2.73210	1.72090	K562	UCHL5
CLK2	ENSG00000176444.14	2208.80990	2528.13400	-0.19480	2.38220	1.71310	K562	UPF1
CLK2	ENSG00000176444.14	960.17210	1305.34120	-0.44310	3.57940	2.13950	K562	XRN2
CLK2	ENSG00000176444.14	1739.80500	2516.92080	-0.53270	6.94020	5.47500	K562	ZC3H8
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

The Knockdown/knockout RNA-Seq assay for CLK2 is not available on ENCORE database.

18 RBPs can affect the splicing of CLK2 :

Event Type	Gene Name	Gene ID	chr	Strand	ExonStart	ExonEnd	2ndExonStart	2ndExonEnd	upstreamES	upstreamEE	downstreamES	downstreamEE	dPSI	p-value	FDR	is_included	Cell Line	Affected by RBP
SE	CLK2	ENSG00000176444.14	chr1	-	155233363	155233499			155232658	155233191	155233740	155233831	0.12100	0.00036	0.00900	included	K562	SRSF1
SE	CLK2	ENSG00000176444.14	chr1	-	155238498	155238586			155238083	155238150	155239278	155239507	0.08200	0.00485	0.07408	included	HepG2	U2AF1
SE	CLK2	ENSG00000176444.14	chr1	-	155236519	155236686			155234435	155234565	155237800	155237917	-0.11300	0.00706	0.09886	excluded	HepG2	U2AF1
SE	CLK2	ENSG00000176444.14	chr1	-	155238498	155238586			155238083	155238150	155239278	155239507	0.13200	0.00000	0.00001	included	HepG2	U2AF2
SE	CLK2	ENSG00000176444.14	chr1	-	155236519	155236686			155234435	155234565	155237800	155237917	-0.13600	0.00000	0.00010	excluded	K562	AQR
SE	CLK2	ENSG00000176444.14	chr1	-	155238498	155238586			155238083	155238150	155239278	155239507	-0.15900	0.00214	0.02320	excluded	K562	AQR
SE	CLK2	ENSG00000176444.14	chr1	-	155234011	155234122			155233740	155233831	155234258	155234341	-0.06800	0.00011	0.00189	excluded	K562	AQR
SE	CLK2	ENSG00000176444.14	chr1	-	155238498	155238586			155238083	155238150	155239278	155239507	-0.19000	0.00339	0.09690	excluded	K562	FXR1
SE	CLK2	ENSG00000176444.14	chr1	-	155233363	155233499			155232658	155233191	155233740	155233831	0.15600	0.00000	0.00000	included	K562	HNRNPA1
SE	CLK2	ENSG00000176444.14	chr1	-	155238498	155238586			155238083	155238150	155239278	155239444	-0.40800	0.00000	0.00038	excluded	HepG2	NCBP2
SE	CLK2	ENSG00000176444.14	chr1	-	155236519	155236686			155234435	155234565	155237800	155237917	-0.16300	0.00225	0.09512	excluded	HepG2	PTBP1
SE	CLK2	ENSG00000176444.14	chr1	-	155238498	155238586			155238083	155238150	155239278	155239507	0.26200	0.00082	0.05707	included	HepG2	HNRNPL
SE	CLK2	ENSG00000176444.14	chr1	-	155236519	155236686			155234435	155234565	155237800	155237917	-0.16300	0.00204	0.04459	excluded	HepG2	SRSF1
SE	CLK2	ENSG00000176444.14	chr1	-	155238498	155238586			155238083	155238150	155239278	155239507	-0.29100	0.00584	0.09901	excluded	HepG2	SRSF1
SE	CLK2	ENSG00000176444.14	chr1	-	155233363	155233499			155232658	155233191	155233740	155233831	-0.10000	0.00058	0.04443	excluded	HepG2	TIAL1
SE	CLK2	ENSG00000176444.14	chr1	-	155233363	155233499			155232658	155233191	155233740	155233831	0.08000	0.00093	0.04537	included	HepG2	PCBP1
SE	CLK2	ENSG00000176444.14	chr1	-	155236519	155236686			155234435	155234565	155237800	155237917	-0.32700	0.00000	0.00008	excluded	HepG2	PCBP1
SE	CLK2	ENSG00000176444.14	chr1	-	155233363	155233499			155232658	155233191	155233740	155233831	-0.06700	0.00005	0.01577	excluded	K562	EIF4G2
SE	CLK2	ENSG00000176444.14	chr1	-	155236519	155236686			155234435	155234565	155237800	155237917	-0.17500	0.00097	0.08518	excluded	HepG2	TAF15
SE	CLK2	ENSG00000176444.14	chr1	-	155238498	155238586			155238083	155238150	155239278	155239507	-0.23800	0.00002	0.00054	excluded	K562	HNRNPC
A3SS	CLK2	ENSG00000176444.14	chr1	-	155239278	155239507			155239278	155239504	155240598	155240768	0.21200	0.00030	0.07673	longer	HepG2	HNRNPU
A3SS	CLK2	ENSG00000176444.14	chr1	-	155235650	155235824			155235650	155235745	155236519	155236686	0.05400	0.00051	0.07626	longer	K562	RBM22
A3SS	CLK2	ENSG00000176444.14	chr1	-	155235650	155235824			155235650	155235745	155236519	155236686	0.08600	0.00046	0.02052	longer	K562	U2AF2
A3SS	CLK2	ENSG00000176444.14	chr1	-	155235650	155235824			155235650	155235745	155236519	155236686	0.06300	0.00219	0.09419	longer	K562	SF3B4
A3SS	CLK2	ENSG00000176444.14	chr1	-	155238083	155238236			155238083	155238150	155238498	155238586	0.12700	0.00008	0.07349	longer	K562	PUM1
A3SS	CLK2	ENSG00000176444.14	chr1	-	155235650	155235824			155235650	155235745	155236519	155236686	0.11200	0.00000	0.00000	longer	K562	AQR
A3SS	CLK2	ENSG00000176444.14	chr1	-	155240598	155240834			155240598	155240768	155242991	155243307	0.07500	0.00000	0.00000	longer	K562	AQR
A3SS	CLK2	ENSG00000176444.14	chr1	-	155237784	155237998			155237784	155237917	155238083	155238236	0.14400	0.00000	0.00000	longer	K562	AQR
A3SS	CLK2	ENSG00000176444.14	chr1	-	155238083	155238236			155238083	155238150	155238498	155238586	0.16600	0.00045	0.00337	longer	K562	AQR
A3SS	CLK2	ENSG00000176444.14	chr1	-	155237800	155237988			155237800	155237917	155238083	155239154	0.08200	0.00064	0.07643	longer	HepG2	PCBP1
MXE	CLK2	ENSG00000176444.14	chr1	-	155235650	155235745	155236519	155236686	155234435	155234565	155237800	155237917	0.10500	0.00000	0.00003	1included	HepG2	U2AF2
MXE	CLK2	ENSG00000176444.14	chr1	-	155235650	155235745	155236519	155236686	155234435	155234565	155237800	155237917	0.19200	0.00005	0.00422	1included	K562	TAF15

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

CLK2

General Information

Functions

Localization

Domains (AlphaFold: CLK2)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for CLK2 is not avaliable on ENCORE database.

31 proteins are bound to CLK2 RNA:

eCLIP assay for CLK2 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for CLK2 is not available on ENCORE database.

60 RBPs can affect the gene expression of CLK2 :

The Knockdown/knockout RNA-Seq assay for CLK2 is not available on ENCORE database.

18 RBPs can affect the splicing of CLK2 :

The Knockdown/knockout RNA-Seq assay for CLK2 is not avaliable on ENCORE database.