C7orf60

General Information

Gene Name       : C7orf60
Gene ID             :
Essential Gene : No

Functions

Localization

Domains (AlphaFold: C7orf60)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for C7orf60 is not avaliable on ENCORE database.



Proteins bound to RNA
  • C7orf60 RNA is bound by 12 proteins.  







eCLIP assay for C7orf60 is not avaliable on ENCORE database.





12 proteins are bound to C7orf60 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr7112555351112555424-CDS,intron-Distal,intron-Proximal4.111843.45943HepG2BCLAF1
chr7112555354112555503-CDS,intron-Distal,intron-Proximal3.310873.43213K562UCHL5
chr7112579642112579716-CDS,intron-Distal,intron-Proximal3.778323.01428K562UCHL5
chr7112555410112555505-CDS,intron-Distal,intron-Proximal4.120223.20743HepG2PPIG
chr7112512345112512406-intron-Distal5.262508.03988K562EXOSC5
chr7112483840112483889-intron-Distal4.841036.41216K562EXOSC5
chr7112554870112554913-intron-Distal4.053613.12827HepG2U2AF2
chr7112510413112510446-intron-Distal4.638545.12432K562EXOSC5
chr7112498343112498478-intron-Distal3.775063.25538K562KHSRP
chr7112536228112536322-intron-Distal3.254584.30735HepG2HNRNPL
chr7112536181112536304-intron-Distal4.031634.04407K562HNRNPL
chr7112534171112534280-intron-Distal5.121417.38423HepG2PCBP2
chr7112509358112509469-intron-Distal4.325614.27460K562HNRNPM
chr7112513065112513105-intron-Distal4.304824.48560K562EXOSC5
chr7112511790112511833-intron-Distal5.030677.06134K562EXOSC5
chr7112509502112509557-intron-Distal3.410703.43829K562EXOSC5
chr7112510553112510599-intron-Distal4.042923.24322HepG2MATR3
chr7112512182112512229-intron-Distal5.118218.36716K562EXOSC5
chr7112521439112521487-intron-Distal6.2030523.29224HepG2XPO5
chr7112536881112536965-intron-Distal3.896103.41738HepG2PTBP1
chr7112521487112521500-intron-Distal5.9230119.46132HepG2XPO5
chr7112510014112510059-intron-Distal4.752596.41216K562EXOSC5
chr7112545850112545944-intron-Distal3.042233.29251K562KHSRP
chr7112512057112512102-intron-Distal3.623546.40701K562EXOSC5
chr7112512995112513035-intron-Distal4.313893.60235HepG2HNRNPM
chr7112512102112512140-intron-Distal4.815356.73731K562EXOSC5
chr7112512997112513035-intron-Distal4.385064.48560K562EXOSC5
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for C7orf60 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for C7orf60 is not available on ENCORE database.

  • 87 RBPs can affect the levels of C7orf60.  








The Knockdown/knockout RNA-Seq assay for C7orf60 is not available on ENCORE database.





87 RBPs can affect the gene expression of C7orf60 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
C7orf60ENSG00000164603.7363.73960280.852100.373002.063801.45430HepG2AUH
C7orf60ENSG00000164603.7166.0275099.767800.734702.976002.35810HepG2BOP1
C7orf60ENSG00000164603.7258.43950455.15770-0.816506.140505.01740HepG2CIRBP
C7orf60ENSG00000164603.7111.55430288.99710-1.3733015.3599014.05760HepG2CKAP4
C7orf60ENSG00000164603.7168.6757091.598800.880803.161002.43110HepG2CPSF6
C7orf60ENSG00000164603.7249.75470104.015001.263606.375704.91990HepG2DDX59
C7orf60ENSG00000164603.7107.78650208.33210-0.950705.266203.91110HepG2DDX5
C7orf60ENSG00000164603.796.90120264.59370-1.4492015.9272014.48840HepG2DNAJC2
C7orf60ENSG00000164603.777.83950194.10300-1.318206.908105.52050HepG2EEF2
C7orf60ENSG00000164603.7139.03370458.04560-1.7201019.8890018.39950HepG2EIF2S1
C7orf60ENSG00000164603.770.51260153.60330-1.123304.974803.43160HepG2EIF2S2
C7orf60ENSG00000164603.7229.03900506.23570-1.1442010.455009.23260HepG2EIF4A3
C7orf60ENSG00000164603.7508.45650322.459100.656906.505405.64800HepG2ETF1
C7orf60ENSG00000164603.7165.62270282.45890-0.770105.023303.90130HepG2EWSR1
C7orf60ENSG00000164603.7298.80020191.420800.642303.584202.14760HepG2FKBP4
C7orf60ENSG00000164603.7169.06480510.64500-1.5947019.5516017.89200HepG2FXR1
C7orf60ENSG00000164603.7291.11450473.76420-0.702604.747203.88650HepG2G3BP1
C7orf60ENSG00000164603.7125.75190223.08910-0.827003.826102.19430HepG2HNRNPA0
C7orf60ENSG00000164603.778.07620269.49820-1.7873015.2665013.94780HepG2HNRNPA1
C7orf60ENSG00000164603.7188.43670299.77020-0.669803.561102.78280HepG2HNRNPC
C7orf60ENSG00000164603.7294.45540479.57490-0.703705.052104.12850HepG2HNRNPK
C7orf60ENSG00000164603.7161.5352099.106500.704702.532301.92600HepG2HNRNPLL
C7orf60ENSG00000164603.7179.65820297.78810-0.729005.475504.64480HepG2HNRNPU
C7orf60ENSG00000164603.7311.50110481.59440-0.628604.122503.31270HepG2IGF2BP2
C7orf60ENSG00000164603.7272.52950451.86090-0.729502.390601.48420HepG2IGF2BP3
C7orf60ENSG00000164603.7227.30190304.18010-0.420302.401201.71190HepG2ILF2
C7orf60ENSG00000164603.7277.25110484.35770-0.804905.099103.69930HepG2KHSRP
C7orf60ENSG00000164603.7170.41790264.22290-0.632704.248902.99850HepG2KIF1C
C7orf60ENSG00000164603.7143.66860247.80320-0.786503.501501.58200HepG2LSM11
C7orf60ENSG00000164603.7229.78920510.82270-1.1525011.3203010.02600HepG2MAGOH
C7orf60ENSG00000164603.7329.91200513.70210-0.638903.875203.13970HepG2MATR3
C7orf60ENSG00000164603.785.10710165.49040-0.959404.202603.21650HepG2MSI2
C7orf60ENSG00000164603.7331.56210525.81930-0.665304.481703.68430HepG2NCBP2
C7orf60ENSG00000164603.7169.0086087.863900.943703.950703.06220HepG2NSUN2
C7orf60ENSG00000164603.795.02890175.79590-0.887504.312002.31530HepG2NUP35
C7orf60ENSG00000164603.7265.70220468.35270-0.817806.291305.21430HepG2PABPC4
C7orf60ENSG00000164603.7196.00810294.75500-0.588603.749302.78090HepG2PARN
C7orf60ENSG00000164603.7105.86880177.48720-0.745402.405401.65050HepG2PRPF8
C7orf60ENSG00000164603.7276.06580447.34640-0.696406.237105.48050HepG2PTBP1
C7orf60ENSG00000164603.7254.90330390.85520-0.616705.857205.05950HepG2PUM1
C7orf60ENSG00000164603.7363.07350484.50510-0.416302.720602.10090HepG2QKI
C7orf60ENSG00000164603.7388.20890269.389900.527001.909801.31280HepG2RAVER1
C7orf60ENSG00000164603.7137.88570231.82480-0.749604.218703.18610HepG2RBM15
C7orf60ENSG00000164603.7453.98010269.515500.752206.818706.09050HepG2RBM22
C7orf60ENSG00000164603.7141.65470241.77930-0.771303.325502.16160HepG2RCC2
C7orf60ENSG00000164603.7376.35580497.86060-0.403602.769802.22870HepG2NELFE
C7orf60ENSG00000164603.7271.07460463.67670-0.774407.866006.90490HepG2RECQL
C7orf60ENSG00000164603.779.14810153.32150-0.953904.114203.38000HepG2RPS19
C7orf60ENSG00000164603.7133.85350265.19150-0.986408.086507.07110HepG2SAFB2
C7orf60ENSG00000164603.7293.37220465.76040-0.666906.188705.36370HepG2SF3B4
C7orf60ENSG00000164603.7153.94680309.25470-1.006409.910508.81230HepG2SMN1
C7orf60ENSG00000164603.7300.51740109.156601.460906.082204.91520HepG2SNRNP70
C7orf60ENSG00000164603.7728.78430304.406501.2594026.3727025.23750HepG2SRFBP1
C7orf60ENSG00000164603.7182.44920486.14690-1.4139021.2288020.17800HepG2SRSF1
C7orf60ENSG00000164603.7220.46830363.53410-0.721506.176005.29380HepG2SRSF5
C7orf60ENSG00000164603.7486.24170395.501100.297901.852501.38450HepG2SRSF9
C7orf60ENSG00000164603.777.37910136.58070-0.819702.695601.47190HepG2STAU1
C7orf60ENSG00000164603.7262.51430413.45670-0.655306.183305.32190HepG2SUCLG1
C7orf60ENSG00000164603.761.54240189.47030-1.622306.577904.56710HepG2SUGP2
C7orf60ENSG00000164603.7136.73380289.34410-1.081409.305508.48370HepG2TIAL1
C7orf60ENSG00000164603.7122.67150291.94420-1.2509012.9593011.86550HepG2TRIM56
C7orf60ENSG00000164603.7194.33610380.71570-0.970206.180604.90020HepG2UBE2L3
C7orf60ENSG00000164603.7165.65490236.67540-0.514702.367701.80420HepG2UTP3
C7orf60ENSG00000164603.7426.14610269.174800.662703.751602.22760HepG2ZRANB2
C7orf60ENSG00000164603.7299.53950169.126700.824505.209103.52040K562ABCF1
C7orf60ENSG00000164603.7243.54580174.142800.483802.172401.31410K562AKAP8
C7orf60ENSG00000164603.7264.56590164.904000.681903.364402.64290K562AKAP8L
C7orf60ENSG00000164603.71061.12070267.616701.9872044.6226042.51140K562AQR
C7orf60ENSG00000164603.7285.19730109.941901.3751010.494208.74610K562BOP1
C7orf60ENSG00000164603.7208.50800117.828700.823303.945702.19100K562BUD13
C7orf60ENSG00000164603.7334.59770189.391900.821002.401601.31730K562CCDC124
C7orf60ENSG00000164603.7222.80390322.00990-0.531302.885801.57620K562CIRBP
C7orf60ENSG00000164603.7288.20640194.013600.570802.898801.76240K562CPEB4
C7orf60ENSG00000164603.7559.35310378.823200.562104.094502.89830K562CELF1
C7orf60ENSG00000164603.7144.07850200.69140-0.478101.975301.40720K562DDX47
C7orf60ENSG00000164603.779.36300148.68120-0.905703.102101.74200K562EEF2
C7orf60ENSG00000164603.7171.60510100.827300.767103.038502.07560K562FTO
C7orf60ENSG00000164603.7151.41190213.80910-0.497802.150101.60460K562FXR1
C7orf60ENSG00000164603.7191.25400287.23690-0.586803.280401.69220K562G3BP1
C7orf60ENSG00000164603.746.85960100.04500-1.094203.011002.03470K562HNRNPM
C7orf60ENSG00000164603.7262.77430194.560700.433502.103501.32650K562HNRNPU
C7orf60ENSG00000164603.7202.10070315.75570-0.643704.231403.18770K562MAGOH
C7orf60ENSG00000164603.7284.47840196.050200.537002.773501.86340K562MBNL1
C7orf60ENSG00000164603.7462.19060328.330400.493202.599401.50710K562MSI2
C7orf60ENSG00000164603.7200.94050306.76630-0.610403.923803.14620K562PTBP1
C7orf60ENSG00000164603.7547.38920336.087300.703605.271104.14720K562PUF60
C7orf60ENSG00000164603.7539.59640357.541200.593704.610803.20690K562PUM1
C7orf60ENSG00000164603.7347.60010163.541901.087708.436707.53620K562PUS1
C7orf60ENSG00000164603.7189.35010286.75790-0.598803.139801.62990K562RBM34
C7orf60ENSG00000164603.7245.90720164.095600.583503.058702.07980K562SRPK2
C7orf60ENSG00000164603.7195.56990300.71800-0.620703.633702.82900K562SRSF1
C7orf60ENSG00000164603.7192.15660283.96760-0.563403.024001.91690K562SRSF5
C7orf60ENSG00000164603.798.06020175.26280-0.837804.228602.59730K562SSB
C7orf60ENSG00000164603.7238.66890159.531000.581102.617101.30410K562SSRP1
C7orf60ENSG00000164603.7223.97190304.37910-0.442602.053301.43770K562TARDBP
C7orf60ENSG00000164603.7171.68440293.59940-0.774105.092003.93080K562TIA1
C7orf60ENSG00000164603.7181.14000288.03040-0.669103.828302.51000K562TRA2A
C7orf60ENSG00000164603.7138.91060224.24810-0.690903.084201.91920K562U2AF1
C7orf60ENSG00000164603.7473.19970301.451500.650405.251303.99930K562ZC3H8
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for C7orf60 is not available on ENCORE database.





1 RBPs can affect the splicing of C7orf60 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
A3SSC7orf60ENSG00000164603.7chr7-1124624071124624601124624071124624281124726151124727300.305000.012220.06275longerK562AQR

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for C7orf60 is not avaliable on ENCORE database.