ATF7

General Information

Gene Name       : ATF7
Gene ID             : ENSG00000170653.18
Essential Gene : No

Functions

Localization

Domains (AlphaFold: ATF7)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878ATF7ENSG00000170653.1816.6914.9015.80ENCSR000AEF
HepG2ATF7ENSG00000170653.189.6014.4812.04ENCSR985KAT
K562ATF7ENSG00000170653.1815.0414.7714.90ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for ATF7 is not avaliable on ENCORE database.



Proteins bound to RNA
  • ATF7 RNA is bound by 23 proteins.  







eCLIP assay for ATF7 is not avaliable on ENCORE database.





23 proteins are bound to ATF7 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr125390963353909683-3'-UTR,intron-Distal3.317083.27944K562PTBP1
chr125390981053909883-3'-UTR,intron-Distal3.307053.54602K562TIA1
chr125391054053910600-3'-UTR,intron-Distal3.333803.35585HepG2QKI
chr125390841153908475-3'-UTR,intron-Distal5.172577.71000K562FAM120A
chr125390587753905923-3'-UTR,intron-Distal4.254986.58258HepG2PCBP2
chr125390602153906080-3'-UTR,intron-Distal4.094188.08956HepG2PCBP2
chr125390684253906901-3'-UTR,intron-Distal5.2656625.68079K562UPF1
chr125390948153909547-3'-UTR,intron-Distal,intron-Proximal3.088733.35050HepG2SUGP2
chr125390724553907289-3'-UTR,intron-Distal5.206346.42091K562UPF1
chr125390732753907372-3'-UTR,intron-Distal3.9490510.85611K562UPF1
chr125390762053907673-3'-UTR,intron-Distal3.542168.33876K562UPF1
chr125390611753906136-3'-UTR,intron-Distal5.523027.96764HepG2XPO5
chr125390976553909868-3'-UTR,intron-Distal3.955093.76295K562IGF2BP2
chr125390908753909139-3'-UTR,intron-Distal5.7154410.81337K562UPF1
chr125391034753910391-3'-UTR,intron-Distal,intron-Proximal4.067929.37242K562UPF1
chr125390894053908997-3'-UTR,intron-Distal5.4069518.93168K562UPF1
chr125390847653908507-3'-UTR,intron-Distal3.725676.55257K562UPF1
chr125390776953907834-3'-UTR,intron-Distal3.783765.10007K562FAM120A
chr125390587453905969-3'-UTR,intron-Distal5.551525.82558K562PCBP1
chr125391046253910527-3'-UTR,intron-Distal3.3362210.62751K562UPF1
chr125390648453906548-3'-UTR,intron-Distal3.424463.57062K562IGF2BP1
chr125390974153909790-3'-UTR,intron-Distal4.252928.02555HepG2PCBP2
chr125393711153937152-3'-UTR,CDS,intron-Distal,intron-Proximal4.136093.06595HepG2BCLAF1
chr125390613653906167-3'-UTR,intron-Distal6.1333012.84344HepG2XPO5
chr125393710653937208-3'-UTR,CDS,intron-Distal,intron-Proximal3.414534.44630K562ZNF622
chr125390641953906484-3'-UTR,intron-Distal4.180404.24698K562IGF2BP1
chr125390776753907823-3'-UTR,intron-Distal4.8622411.77875K562UPF1
chr125390979753909899-3'-UTR,intron-Distal3.750443.39827HepG2MATR3
chr125390864953908705-3'-UTR,intron-Distal3.3781311.74548K562UPF1
chr125390839353908476-3'-UTR,intron-Distal3.6336320.24540K562UPF1
chr125390641153906460-3'-UTR,intron-Distal3.964697.87505K562UPF1
chr125390873653908784-3'-UTR,intron-Distal5.502629.20661K562UPF1
chr125390673653906842-3'-UTR,intron-Distal5.4787830.29908K562UPF1
chr125390964753909682-3'-UTR,intron-Distal4.450688.66095K562UPF1
chr125399472853994794-5'-UTR,CDS,intron-Distal,intron-Proximal3.237993.47879HepG2PPIG
chr125392634753926427-CDS,intron-Distal,intron-Proximal3.457818.56398HepG2U2AF2
chr125391841353918461-CDS,intron-Distal3.903393.16051HepG2PPIG
chr125392638153926426-CDS,intron-Distal,intron-Proximal4.618604.48002K562AQR
chr125392560753925683-CDS,intron-Distal,intron-Proximal3.970443.20743HepG2PPIG
chr125392830453928419-CDS,intron-Distal,intron-Proximal3.735707.26220HepG2PCBP2
chr125392695553927014-CDS,intron-Distal3.393963.93645HepG2PPIG
chr125391700553917104-CDS,intron-Distal,intron-Proximal4.054257.08947HepG2PRPF8
chr125392636453926421-CDS,intron-Distal,intron-Proximal3.872323.23382HepG2U2AF1
chr125392690053926946-CDS,intron-Distal,intron-Proximal4.527317.92018K562AQR
chr125392629153926356-CDS,intron-Distal,intron-Proximal4.084683.16051HepG2PPIG
chr125399365853993739-intron-Distal4.045917.25214HepG2CSTF2
chr125396807953968159-intron-Distal3.453773.59523HepG2SUGP2
chr125398053353980634-intron-Distal5.193459.16624K562TARDBP
chr125398596853986044-intron-Distal4.133553.87294K562TARDBP
chr125399364753993723-intron-Distal4.132238.23042HepG2U2AF2
chr125398734253987419-intron-Distal5.3413610.44346HepG2QKI
chr125399377453993914-intron-Distal3.4581610.41291K562KHSRP
chr125399366753993738-intron-Distal4.885547.46616K562CSTF2T
chr125398651753986579-intron-Distal4.511285.54528HepG2QKI
chr125396994053970100-intron-Distal5.042948.82993HepG2SUGP2
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for ATF7 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for ATF7 is not available on ENCORE database.

  • 75 RBPs can affect the levels of ATF7.  








The Knockdown/knockout RNA-Seq assay for ATF7 is not available on ENCORE database.





75 RBPs can affect the gene expression of ATF7 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
ATF7ENSG00000170653.141445.780901071.753400.431807.125106.24250HepG2ACO1
ATF7ENSG00000170653.141426.619201075.577900.407403.326502.24000HepG2ADAR
ATF7ENSG00000170653.14869.182601239.13380-0.511603.633903.03520HepG2AKAP1
ATF7ENSG00000170653.141376.629901076.872300.354204.448103.49170HepG2AKAP8L
ATF7ENSG00000170653.14618.91440875.14170-0.499802.999202.01960HepG2BCCIP
ATF7ENSG00000170653.141153.717301800.26680-0.641906.806905.91650HepG2BOP1
ATF7ENSG00000170653.142474.176601914.196600.370102.228101.36110HepG2CCAR1
ATF7ENSG00000170653.141725.271701391.588400.310002.717701.62190HepG2CPSF7
ATF7ENSG00000170653.14835.94190991.26450-0.245902.416601.63130HepG2DDX19B
ATF7ENSG00000170653.14908.683601186.94910-0.385402.550601.94830HepG2DDX3X
ATF7ENSG00000170653.141166.020201471.58050-0.335802.463301.50630HepG2DDX5
ATF7ENSG00000170653.14750.92440980.17600-0.384402.468301.90670HepG2EIF2S1
ATF7ENSG00000170653.141035.97990789.173100.392502.880301.96100HepG2EIF3D
ATF7ENSG00000170653.142163.370501574.418700.458408.405107.45550HepG2ETF1
ATF7ENSG00000170653.14767.988101047.38380-0.447604.249903.21380HepG2EWSR1
ATF7ENSG00000170653.142889.157701706.202000.759809.188107.89210HepG2FIP1L1
ATF7ENSG00000170653.141501.391801093.422800.457303.621002.89540HepG2HNRNPA1
ATF7ENSG00000170653.14898.863101107.39140-0.301003.345802.61080HepG2HNRNPL
ATF7ENSG00000170653.14970.840801208.19540-0.315503.583002.90120HepG2HNRNPU
ATF7ENSG00000170653.141069.700001234.13060-0.206301.965601.33480HepG2ILF2
ATF7ENSG00000170653.14600.953501099.49690-0.871509.155208.06150HepG2MATR3
ATF7ENSG00000170653.141154.22860990.673500.220301.890501.37240HepG2PCBP1
ATF7ENSG00000170653.14896.777701077.61270-0.265002.230501.56170HepG2PPIL4
ATF7ENSG00000170653.141485.078401008.058000.558909.765108.86050HepG2PTBP1
ATF7ENSG00000170653.141651.989601091.665100.5976013.5283012.34320HepG2PUS1
ATF7ENSG00000170653.14901.794501091.72900-0.275702.150401.58800HepG2QKI
ATF7ENSG00000170653.141224.46520990.822800.305402.381701.75080HepG2RBM25
ATF7ENSG00000170653.14990.15190767.885500.366702.952202.32110HepG2RPS19
ATF7ENSG00000170653.14720.287401075.94780-0.579009.953308.84900HepG2SAFB2
ATF7ENSG00000170653.141422.993901769.91590-0.314802.079601.46200HepG2SF3B1
ATF7ENSG00000170653.141078.799701254.73080-0.218002.253101.66300HepG2SMN1
ATF7ENSG00000170653.14870.756701159.11780-0.412702.289901.42800HepG2SMNDC1
ATF7ENSG00000170653.141696.143201486.244000.190501.936501.49490HepG2SRFBP1
ATF7ENSG00000170653.141434.438601095.457900.388905.442304.83550HepG2SRSF1
ATF7ENSG00000170653.141262.63750891.220100.502508.487507.61470HepG2SRSF9
ATF7ENSG00000170653.141277.065101742.50380-0.448303.513302.70730HepG2TARDBP
ATF7ENSG00000170653.14960.234401184.48370-0.302803.309602.70520HepG2TRIM56
ATF7ENSG00000170653.141352.965001124.297300.267002.082501.33400HepG2TUFM
ATF7ENSG00000170653.142248.474201006.775901.159104.160202.93970HepG2U2AF2
ATF7ENSG00000170653.141727.527001466.828600.235902.671602.08340HepG2UTP3
ATF7ENSG00000170653.14656.68140907.00990-0.465902.551901.50660HepG2XPO5
ATF7ENSG00000170653.14575.56590843.19680-0.550903.943503.08520HepG2XRN2
ATF7ENSG00000170653.141779.968801425.421200.320404.913704.06210HepG2ZC3H8
ATF7ENSG00000170653.142260.691002932.80370-0.375504.874703.26910K562CCDC124
ATF7ENSG00000170653.141590.214601967.19570-0.306902.904702.10220K562CPSF6
ATF7ENSG00000170653.14740.630501071.97860-0.533505.932904.33760K562DDX3X
ATF7ENSG00000170653.142203.589502747.95460-0.318504.458303.30870K562DKC1
ATF7ENSG00000170653.14679.93480942.54150-0.471203.588102.53920K562EFTUD2
ATF7ENSG00000170653.14813.591301177.48110-0.533308.263906.15690K562EIF2S1
ATF7ENSG00000170653.141932.599502352.46230-0.283603.200102.19250K562EIF4G2
ATF7ENSG00000170653.141480.599001846.58810-0.318702.643201.81410K562FIP1L1
ATF7ENSG00000170653.141284.937401696.63290-0.401003.188702.20250K562FTO
ATF7ENSG00000170653.14799.280501164.70630-0.543207.741106.79720K562FXR1
ATF7ENSG00000170653.141089.974001632.99800-0.583207.734306.45750K562GRSF1
ATF7ENSG00000170653.141035.829701518.79670-0.552104.901403.62430K562HNRNPM
ATF7ENSG00000170653.141849.615601516.789600.286102.885801.97310K562HNRNPU
ATF7ENSG00000170653.141975.090302503.64920-0.342102.990302.16440K562HSPD1
ATF7ENSG00000170653.14740.486401014.87020-0.454803.351901.70090K562ILF3
ATF7ENSG00000170653.141004.198301362.53360-0.440204.469003.39440K562MAGOH
ATF7ENSG00000170653.14969.451801359.77630-0.488105.722204.32920K562MATR3
ATF7ENSG00000170653.141963.711802507.52530-0.352702.991201.81470K562MSI2
ATF7ENSG00000170653.141437.086001665.50230-0.212802.200101.47540K562MTPAP
ATF7ENSG00000170653.142147.471101850.588700.214603.147302.35570K562NSUN2
ATF7ENSG00000170653.142365.204501537.606800.621202.200201.33820K562PABPN1
ATF7ENSG00000170653.14919.671001212.32580-0.398603.391902.31010K562PCBP2
ATF7ENSG00000170653.141680.420102118.55950-0.334302.324801.56220K562PCBP3
ATF7ENSG00000170653.141103.620501624.98820-0.558207.992906.65350K562POLR2G
ATF7ENSG00000170653.141442.257002096.17300-0.539406.179104.87120K562PPIG
ATF7ENSG00000170653.14507.89900917.20180-0.852709.717508.30610K562PRPF8
ATF7ENSG00000170653.14777.453401075.70770-0.468504.120602.98640K562PSIP1
ATF7ENSG00000170653.141065.454801323.78340-0.313202.717502.05860K562PTBP1
ATF7ENSG00000170653.142057.600002729.93550-0.407905.346403.82360K562PUM1
ATF7ENSG00000170653.142154.016802674.99740-0.312503.821102.68860K562PUM2
ATF7ENSG00000170653.14926.894801269.37490-0.453604.232203.16550K562RBM22
ATF7ENSG00000170653.14962.942301335.80820-0.472204.218502.83650K562NELFE
ATF7ENSG00000170653.14898.154601213.49130-0.434104.816303.67530K562SF3B4
ATF7ENSG00000170653.141404.317501870.72710-0.413707.943706.45170K562SRPK2
ATF7ENSG00000170653.14680.74120875.99590-0.363803.114301.73740K562SSB
ATF7ENSG00000170653.14801.938401313.41250-0.711808.608907.27160K562TARDBP
ATF7ENSG00000170653.141336.162201034.662800.368802.605101.69890K562TIAL1
ATF7ENSG00000170653.141377.195901099.085800.325302.545301.64460K562TRIM56
ATF7ENSG00000170653.141489.239301960.38090-0.396606.293004.35200K562TROVE2
ATF7ENSG00000170653.142231.246601679.012400.410104.682703.53030K562WDR3
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for ATF7 is not available on ENCORE database.





2 RBPs can affect the splicing of ATF7 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SEATF7ENSG00000170653.14chr12-539947365399480553946324539464215402006254020191-0.126000.000240.00359excludedK562AQR
SEATF7ENSG00000170653.14chr12-539947365399480553946324539464215402006254020191-0.069000.000080.00373excludedK562RBM15

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for ATF7 is not avaliable on ENCORE database.