AFTPH

General Information

Gene Name       : AFTPH
Gene ID             : ENSG00000119844.15
Essential Gene : No

Functions

Localization

Domains (AlphaFold: AFTPH)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878AFTPHENSG00000119844.1555.0040.5147.75ENCSR000AEF
HepG2AFTPHENSG00000119844.1512.9426.0619.50ENCSR985KAT
K562AFTPHENSG00000119844.1511.2112.3211.77ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for AFTPH is not avaliable on ENCORE database.



Proteins bound to RNA
  • AFTPH RNA is bound by 20 proteins.  







eCLIP assay for AFTPH is not avaliable on ENCORE database.





20 proteins are bound to AFTPH RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr26481989064819970+3'-UTR3.712244.01064HepG2FUBP3
chr26481940964819477+3'-UTR3.761655.73852HepG2FUBP3
chr26481991664819987+3'-UTR5.022285.56446K562ZC3H11A
chr26475153964751690+5'-UTR5.320617.23011HepG2EIF3H
chr26475154964751607+5'-UTR3.228185.10926HepG2GTF2F1
chr26475154064751641+5'-UTR3.925686.48632HepG2PRPF4
chr26475154564751637+5'-UTR3.827666.67587HepG2DDX3X
chr26479674064796860+CDS,intron-Distal,intron-Proximal3.694134.77019K562BUD13
chr26478035564780411+CDS4.002193.73331K562RBM15
chr26479622764796290+CDS,intron-Distal3.156344.34695HepG2BCLAF1
chr26481896264819051+CDS,intron-Proximal3.215594.50936K562SF3B4
chr26481250564812588+CDS,intron-Proximal4.316195.16342K562SF3B4
chr26477881364778868+CDS4.235285.35091K562PUM2
chr26479629864796401+CDS,intron-Distal,intron-Proximal4.041223.01090HepG2CDC40
chr26479680964796858+CDS,intron-Distal,intron-Proximal4.831155.65342K562AQR
chr26480019364800242+CDS,intron-Proximal3.600914.35635K562PRPF8
chr26476375164763838+intron-Distal3.292223.64832HepG2ZC3H11A
chr26479635264796357+intron-Distal,intron-Proximal3.929354.00320K562AQR
chr26476458764764703+intron-Distal4.032294.48405HepG2CSTF2
chr26480821964808309+intron-Distal,intron-Proximal3.603146.82051HepG2QKI
chr26480814464808256+intron-Distal,intron-Proximal3.538784.52210K562KHSRP
chr26480513464805197+intron-Distal4.287573.82414HepG2HNRNPK
chr26476541064765472+intron-Distal5.279745.51162HepG2U2AF2
chr26479635764796417+intron-Distal,intron-Proximal4.858798.52787K562AQR
chr26480794964808001+intron-Distal4.103143.50357HepG2QKI
chr26475395264754024+intron-Distal3.245033.35377HepG2QKI
chr26478575664785828+intron-Distal4.590145.64178HepG2HNRNPL
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for AFTPH is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for AFTPH is not available on ENCORE database.

  • 72 RBPs can affect the levels of AFTPH.  








The Knockdown/knockout RNA-Seq assay for AFTPH is not available on ENCORE database.





72 RBPs can affect the gene expression of AFTPH :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
AFTPHENSG00000119844.101174.046901642.71100-0.484602.896402.35290HepG2AKAP1
AFTPHENSG00000119844.101362.194601022.548000.413703.197101.68790HepG2ATP5C1
AFTPHENSG00000119844.10652.38680952.00300-0.545202.321201.46510HepG2BCCIP
AFTPHENSG00000119844.101127.165201376.74970-0.288604.015903.14900HepG2DAZAP1
AFTPHENSG00000119844.101107.81070903.289200.294401.922301.34460HepG2DDX21
AFTPHENSG00000119844.10834.836401063.10910-0.348702.409101.46320HepG2DDX5
AFTPHENSG00000119844.10725.55410985.63160-0.442002.514901.63270HepG2EEF2
AFTPHENSG00000119844.10914.289401299.56630-0.507303.822103.13250HepG2EIF2S1
AFTPHENSG00000119844.10685.62510984.08260-0.521405.344904.18490HepG2EWSR1
AFTPHENSG00000119844.10966.601901448.79200-0.583905.450404.50110HepG2FXR1
AFTPHENSG00000119844.101007.117701344.16190-0.416502.876902.19890HepG2G3BP1
AFTPHENSG00000119844.10527.72590712.47260-0.433002.528901.67620HepG2GEMIN5
AFTPHENSG00000119844.101319.676001046.532500.334501.993501.44450HepG2GPKOW
AFTPHENSG00000119844.10626.26390929.20400-0.569205.564304.69200HepG2HNRNPA1
AFTPHENSG00000119844.10956.035401360.63070-0.509104.774603.87790HepG2HNRNPK
AFTPHENSG00000119844.10796.273101254.16490-0.6554014.8959013.44510HepG2HNRNPL
AFTPHENSG00000119844.101252.55110998.727500.326602.141601.58100HepG2HNRNPLL
AFTPHENSG00000119844.10595.167101026.73190-0.7867015.7290014.37980HepG2HNRNPU
AFTPHENSG00000119844.101003.058101366.38050-0.446003.359102.62190HepG2IGF2BP2
AFTPHENSG00000119844.10765.522001048.77310-0.454207.327406.19540HepG2ILF2
AFTPHENSG00000119844.101169.43220885.581300.401003.103602.31240HepG2NSUN2
AFTPHENSG00000119844.101053.526801239.29340-0.234302.025701.54470HepG2PTBP1
AFTPHENSG00000119844.101164.546401382.29910-0.247302.096601.50780HepG2PUM2
AFTPHENSG00000119844.101585.709901342.160500.240502.028001.48080HepG2QKI
AFTPHENSG00000119844.101859.43660989.123500.910506.779505.70140HepG2RAVER1
AFTPHENSG00000119844.101834.310301297.339900.499606.797905.53140HepG2RBM15
AFTPHENSG00000119844.101177.144501379.20490-0.228502.001401.52510HepG2NELFE
AFTPHENSG00000119844.10512.40770778.54830-0.603505.122104.31550HepG2RPS19
AFTPHENSG00000119844.10953.92330714.606800.416603.072302.25020HepG2RRP9
AFTPHENSG00000119844.101578.065301346.743400.228602.324101.88090HepG2SRSF1
AFTPHENSG00000119844.101587.303601286.585400.302903.396802.71540HepG2SRSF5
AFTPHENSG00000119844.101266.434801095.654900.208901.913801.43890HepG2SRSF9
AFTPHENSG00000119844.101553.510801357.648000.194301.831501.39290HepG2SSB
AFTPHENSG00000119844.101300.13670924.310600.492102.548501.39590HepG2SUB1
AFTPHENSG00000119844.10671.57580997.67170-0.571006.951406.22460HepG2TIAL1
AFTPHENSG00000119844.101501.88740978.538000.618007.134006.13350HepG2U2AF1
AFTPHENSG00000119844.10641.12560942.35820-0.555707.892106.96420HepG2UTP3
AFTPHENSG00000119844.10547.40480917.27960-0.744803.838102.99250HepG2XRN2
AFTPHENSG00000119844.101078.67760873.284900.304603.470002.73110HepG2ZC3H8
AFTPHENSG00000119844.101190.85570873.228800.447505.090404.35950K562AGGF1
AFTPHENSG00000119844.101247.57150908.650300.457204.627303.77580K562AKAP8L
AFTPHENSG00000119844.102342.584401027.606101.1887025.3194023.73700K562AQR
AFTPHENSG00000119844.10858.48560562.139000.610805.333904.11180K562BOP1
AFTPHENSG00000119844.10794.83430597.682200.411203.265102.41090K562CPSF6
AFTPHENSG00000119844.102039.359201467.880400.474306.613905.12210K562CELF1
AFTPHENSG00000119844.10688.02420505.149700.445602.674401.65710K562EIF3D
AFTPHENSG00000119844.101565.135801193.864700.390505.235503.96290K562EIF4G2
AFTPHENSG00000119844.10936.81530608.191100.623106.084904.80450K562FMR1
AFTPHENSG00000119844.10744.65050515.524500.530403.809102.72170K562FTO
AFTPHENSG00000119844.10687.67090527.571100.382303.036801.62360K562FUS
AFTPHENSG00000119844.101256.89930761.505300.722802.624701.94010K562G3BP2
AFTPHENSG00000119844.10788.85110639.129400.303502.392601.33980K562GLRX3
AFTPHENSG00000119844.10832.01230570.613100.544004.827703.78330K562GPKOW
AFTPHENSG00000119844.101339.00150964.248500.473603.521702.58020K562KIF1C
AFTPHENSG00000119844.10680.56620487.301400.481802.538801.64760K562KRR1
AFTPHENSG00000119844.10709.63320556.993200.349302.175201.39760K562METAP2
AFTPHENSG00000119844.101568.578401272.551700.301602.416401.36390K562MSI2
AFTPHENSG00000119844.101235.48000757.153800.706303.771602.70100K562NAA15
AFTPHENSG00000119844.10870.09150667.507400.382303.231001.89630K562NCBP2
AFTPHENSG00000119844.101730.090001305.862100.405703.703001.96260K562NOL12
AFTPHENSG00000119844.10686.78890459.050200.581104.548903.58750K562PRPF8
AFTPHENSG00000119844.102000.269301302.605100.618708.547707.10540K562PUF60
AFTPHENSG00000119844.101840.734701385.464100.409804.879303.43100K562PUM1
AFTPHENSG00000119844.101994.26940901.016401.1461023.0506021.50080K562PUS1
AFTPHENSG00000119844.101132.45080726.600200.640103.642201.97580K562RAVER1
AFTPHENSG00000119844.101385.97310878.000300.6585011.4315010.24320K562RBM15
AFTPHENSG00000119844.10959.42290722.446300.409203.440601.93970K562RBM25
AFTPHENSG00000119844.10937.18830736.759200.347003.456102.55000K562SF3A3
AFTPHENSG00000119844.10771.70100542.769100.507603.308802.24300K562SF3B1
AFTPHENSG00000119844.10581.16070805.75380-0.471403.855902.58450K562SRSF4
AFTPHENSG00000119844.101548.71410950.906000.703602.974401.48220K562SUPT6H
AFTPHENSG00000119844.10628.52980444.544200.499603.214102.11610K562SUPV3L1
AFTPHENSG00000119844.101166.21090738.311000.659404.830203.30220K562U2AF1
AFTPHENSG00000119844.101213.62900762.460600.6705010.084708.54880K562U2AF2
AFTPHENSG00000119844.101481.57400913.653400.697303.722202.15320K562UTP18
AFTPHENSG00000119844.101557.93550935.551300.735603.274001.50440K562YTHDC2
AFTPHENSG00000119844.101414.320501157.553700.288902.170001.41660K562ZC3H8
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for AFTPH is not available on ENCORE database.





7 RBPs can affect the splicing of AFTPH :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SEAFTPHENSG00000119844.10chr2+6480832364808407648066196480668064812555648126790.318000.001020.02096includedHepG2U2AF1
SEAFTPHENSG00000119844.10chr2+6480661964806680648000796480020264812555648126790.247000.000490.04805includedHepG2PRPF8
SEAFTPHENSG00000119844.10chr2+6480832364808407648066196480668064812555648126790.366000.000900.01288includedHepG2U2AF2
SEAFTPHENSG00000119844.10chr2+648066196480668064800060648002026481255564812679-0.257000.001770.01977excludedK562AQR
SEAFTPHENSG00000119844.10chr2+6480832364808407648066196480668064812555648126790.440000.000000.00012includedK562U2AF1
SEAFTPHENSG00000119844.10chr2+648066196480668064800079648002026481255564812679-0.210000.000440.03574excludedHepG2HNRNPL
SEAFTPHENSG00000119844.10chr2+648066196480668064800079648002026481255564812679-0.164000.002060.08253excludedHepG2PCBP1
SEAFTPHENSG00000119844.10chr2+6480832364808407648066196480668064812555648126790.512000.000050.00163includedK562U2AF2
A3SSAFTPHENSG00000119844.10chr2+6480006064800202648000796480020264796681647968130.173000.000010.00010longerK562AQR
A3SSAFTPHENSG00000119844.10chr2+6481901864820131648190216482013164812555648126790.368000.000060.01281longerK562PRPF8
A5SSAFTPHENSG00000119844.10chr2+6480661964808407648066196480668064812555648126790.402000.000010.00279longerK562U2AF1
A5SSAFTPHENSG00000119844.10chr2+6479622564796434647962256479635264796756647968130.144000.000010.00018longerK562AQR
A5SSAFTPHENSG00000119844.10chr2+6480661964808407648066196480668064812555648126790.318000.000720.03039longerHepG2U2AF2
A5SSAFTPHENSG00000119844.10chr2+6480661964808407648066196480668064812555648126790.482000.000470.02962longerK562U2AF2
MXEAFTPHENSG00000119844.10chr2+6480007964800202648066196480668064796756647968136481255564812679-0.235000.002360.037372includedK562SRSF1
MXEAFTPHENSG00000119844.10chr2+64796712647968136480007964800202647962256479635264806619648084070.093000.008060.053121includedK562AQR
MXEAFTPHENSG00000119844.10chr2+64796712647968136480006064800202647962256479635264806619648084070.093000.008430.055111includedK562AQR
MXEAFTPHENSG00000119844.10chr2+64800060648002026480661964806680647967566479681364812555648126790.326000.008270.054301includedK562AQR
MXEAFTPHENSG00000119844.10chr2+6479675664796813648000606480020264796225647963526481255564812679-0.164000.005320.037912includedK562AQR

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for AFTPH is not avaliable on ENCORE database.