ZNF273

General Information

Gene Name       : ZNF273
Gene ID             : ENSG00000198039.11
Essential Gene : No

Functions

Localization

Domains (AlphaFold: ZNF273)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878ZNF273ENSG00000198039.115.395.605.49ENCSR000AEF
HepG2ZNF273ENSG00000198039.111.994.833.41ENCSR985KAT
K562ZNF273ENSG00000198039.1114.0813.9714.03ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for ZNF273 is not avaliable on ENCORE database.



Proteins bound to RNA
  • ZNF273 RNA is bound by 6 proteins.  







eCLIP assay for ZNF273 is not avaliable on ENCORE database.





6 proteins are bound to ZNF273 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr76438430464384379+3'-UTR,intron-Distal3.995593.31110K562TIA1
chr76437749364377545+3'-UTR,CDS,intron-Distal,intron-Proximal4.973856.22530K562AQR
chr76438807364388180+3'-UTR,CDS3.127683.26275K562BUD13
chr76438943264389511+3'-UTR4.5793510.54280K562PUM2
chr76436369464363785+5'-UTR,CDS,intron-Distal,intron-Proximal4.033955.63105K562DDX3X
chr76437956164379664+intron-Distal3.283306.39618K562KHSRP
chr76438470564384784+intron-Distal3.271579.72619K562KHSRP
chr76438623164386357+intron-Distal3.545277.82071K562KHSRP
chr76438467764384705+intron-Distal3.126917.03691K562KHSRP
chr76437810864378182+intron-Proximal4.618604.48002K562AQR
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for ZNF273 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for ZNF273 is not available on ENCORE database.

  • 75 RBPs can affect the levels of ZNF273.  








The Knockdown/knockout RNA-Seq assay for ZNF273 is not available on ENCORE database.





75 RBPs can affect the gene expression of ZNF273 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
ZNF273ENSG00000198039.756.55600101.81480-0.848202.374801.64340HepG2ASCC1
ZNF273ENSG00000198039.798.97620185.71970-0.908004.959904.08510HepG2AUH
ZNF273ENSG00000198039.755.31990183.10310-1.7268011.1545010.05930HepG2BOP1
ZNF273ENSG00000198039.752.19510112.65750-1.110004.845804.01220HepG2CKAP4
ZNF273ENSG00000198039.773.55700134.13750-0.866803.740603.01570HepG2CELF1
ZNF273ENSG00000198039.784.46890137.06470-0.698402.411901.33160HepG2DDX1
ZNF273ENSG00000198039.759.88350117.87170-0.977003.235502.56580HepG2DDX3X
ZNF273ENSG00000198039.7108.58120190.89160-0.814002.771501.79170HepG2DDX59
ZNF273ENSG00000198039.757.15950101.26650-0.825102.099901.55510HepG2DDX6
ZNF273ENSG00000198039.774.90620129.62850-0.791202.880701.88240HepG2DHX30
ZNF273ENSG00000198039.760.51530134.39890-1.151105.545204.57880HepG2DNAJC21
ZNF273ENSG00000198039.776.76510133.21610-0.795203.478802.76180HepG2DNAJC2
ZNF273ENSG00000198039.748.7090097.33770-0.998802.927402.31780HepG2EIF2S1
ZNF273ENSG00000198039.760.65800100.68220-0.731001.968901.40370HepG2G3BP1
ZNF273ENSG00000198039.7112.93990190.56860-0.754802.916302.26020HepG2GPKOW
ZNF273ENSG00000198039.763.10410127.41880-1.013804.871403.95380HepG2HNRNPF
ZNF273ENSG00000198039.761.29240181.86210-1.569108.914407.85510HepG2HNRNPLL
ZNF273ENSG00000198039.751.54540149.92950-1.5404010.102109.00400HepG2HNRNPU
ZNF273ENSG00000198039.775.02770125.46810-0.741802.868602.13120HepG2IGF2BP1
ZNF273ENSG00000198039.734.14930102.33790-1.583405.909104.95890HepG2IGF2BP2
ZNF273ENSG00000198039.781.00950153.14780-0.918805.039404.07480HepG2ILF2
ZNF273ENSG00000198039.7115.19820217.59260-0.917503.446502.51820HepG2LARP4
ZNF273ENSG00000198039.756.47130102.36490-0.858102.696601.49630HepG2NAA15
ZNF273ENSG00000198039.760.0806099.51660-0.728001.927901.31660HepG2PABPC4
ZNF273ENSG00000198039.754.87330114.88070-1.066003.756202.55150HepG2PCBP2
ZNF273ENSG00000198039.7117.9395075.806600.637602.028801.54780HepG2PTBP1
ZNF273ENSG00000198039.793.43580136.54670-0.547301.808801.31350HepG2PUF60
ZNF273ENSG00000198039.7102.82340144.93840-0.495301.970601.45270HepG2PUM1
ZNF273ENSG00000198039.763.45520137.30630-1.113605.054004.16800HepG2RPLP0
ZNF273ENSG00000198039.748.95460108.89760-1.153503.910102.78980HepG2RPS10
ZNF273ENSG00000198039.754.1906095.05170-0.810702.304901.73820HepG2RPS19
ZNF273ENSG00000198039.748.7191091.80610-0.914102.486201.72620HepG2RPS3A
ZNF273ENSG00000198039.777.31470133.51810-0.788203.198502.51610HepG2SAFB2
ZNF273ENSG00000198039.7183.71160120.592300.607202.347301.72710HepG2SF3A3
ZNF273ENSG00000198039.771.86320180.01400-1.324807.215206.12220HepG2SF3B1
ZNF273ENSG00000198039.799.42930201.29140-1.017506.327605.65420HepG2SRFBP1
ZNF273ENSG00000198039.7216.2547082.385501.392209.709408.94520HepG2SRSF1
ZNF273ENSG00000198039.770.18160125.19510-0.835003.690202.90440HepG2SRSF7
ZNF273ENSG00000198039.7120.56910174.77510-0.535602.154501.68750HepG2SSB
ZNF273ENSG00000198039.742.52190101.71950-1.258304.480603.29860HepG2SUPT6H
ZNF273ENSG00000198039.7134.3661074.041600.859702.047101.55200HepG2TAF15
ZNF273ENSG00000198039.792.16750177.22980-0.943304.232803.36000HepG2TARDBP
ZNF273ENSG00000198039.737.88170145.67950-1.9432012.3794011.45360HepG2TIAL1
ZNF273ENSG00000198039.775.07400146.98720-0.969305.105304.38650HepG2TRIM56
ZNF273ENSG00000198039.735.1103072.29830-1.042102.182601.50740HepG2UCHL5
ZNF273ENSG00000198039.757.04760106.94640-0.906603.308702.55600HepG2UPF1
ZNF273ENSG00000198039.7192.20230121.919900.656602.417101.42820HepG2XRCC6
ZNF273ENSG00000198039.771.25650117.62140-0.723102.665502.12640HepG2ZNF622
ZNF273ENSG00000198039.7985.667201220.66530-0.308502.215601.62930K562AKAP8L
ZNF273ENSG00000198039.71000.523601280.75890-0.356203.799102.71600K562ATP5C1
ZNF273ENSG00000198039.7493.98320651.54530-0.399403.190401.76250K562BCCIP
ZNF273ENSG00000198039.7753.470201070.16650-0.506206.366004.64790K562CPEB4
ZNF273ENSG00000198039.7342.70490477.66330-0.479003.066601.94920K562CSTF2
ZNF273ENSG00000198039.7415.44970571.59370-0.460303.392002.22340K562DDX3X
ZNF273ENSG00000198039.7496.44200752.65380-0.600403.485702.69370K562EIF2S2
ZNF273ENSG00000198039.7938.51530597.175700.652103.338702.44190K562EIF4A3
ZNF273ENSG00000198039.71070.53490673.627500.668205.204804.16530K562G3BP2
ZNF273ENSG00000198039.7857.68700692.830200.307802.468801.39660K562GLRX3
ZNF273ENSG00000198039.7872.41280664.759900.392103.211802.05330K562HNRNPA1
ZNF273ENSG00000198039.7419.75170554.24870-0.401002.546401.45780K562HNRNPF
ZNF273ENSG00000198039.7599.28660736.12650-0.296702.209701.41270K562HNRNPU
ZNF273ENSG00000198039.7648.08270822.11220-0.343202.401801.31420K562IGF2BP3
ZNF273ENSG00000198039.7456.01650629.48910-0.465102.938801.43650K562LIN28B
ZNF273ENSG00000198039.71145.840001451.23340-0.340903.036502.07480K562MBNL1
ZNF273ENSG00000198039.7564.61180811.17330-0.522804.647003.49070K562METAP2
ZNF273ENSG00000198039.71683.381501146.879100.553503.142301.81760K562PABPC1
ZNF273ENSG00000198039.7636.16010994.97990-0.645303.362002.44290K562PPIG
ZNF273ENSG00000198039.7514.60360825.33470-0.681508.391307.27580K562PTBP1
ZNF273ENSG00000198039.71106.851601420.38790-0.359803.866502.72850K562PUM2
ZNF273ENSG00000198039.7831.429401210.61400-0.542105.431004.70270K562PUS1
ZNF273ENSG00000198039.7521.46260791.44070-0.601905.786104.51370K562RBM22
ZNF273ENSG00000198039.7578.14570771.47050-0.416202.794101.41010K562RBM34
ZNF273ENSG00000198039.7598.63080832.85460-0.476403.702702.41790K562NELFE
ZNF273ENSG00000198039.7327.44620533.61180-0.704504.569903.51740K562RPS19
ZNF273ENSG00000198039.7512.25760712.58890-0.476202.998901.95150K562RPS3
ZNF273ENSG00000198039.7852.20080481.542100.823409.663407.14530K562SDAD1
ZNF273ENSG00000198039.71006.29020798.621100.333403.330902.43990K562SF3A3
ZNF273ENSG00000198039.7360.39530481.30580-0.417402.268801.36090K562SRFBP1
ZNF273ENSG00000198039.7517.15480809.09420-0.645706.950805.84000K562SRSF1
ZNF273ENSG00000198039.7800.79090628.382100.349702.777001.49820K562SSB
ZNF273ENSG00000198039.7756.89870524.305200.529605.245504.10580K562SYNCRIP
ZNF273ENSG00000198039.7350.75860535.24550-0.609704.124302.96190K562TIAL1
ZNF273ENSG00000198039.7835.57190674.581000.308702.323201.58880K562U2AF2
ZNF273ENSG00000198039.7723.86030536.820200.431202.895701.84830K562UCHL5
ZNF273ENSG00000198039.7599.55200858.15190-0.517306.566405.51440K562UPF1
ZNF273ENSG00000198039.7974.92460734.292000.408803.022402.10960K562WDR3
ZNF273ENSG00000198039.71160.37970763.589100.6036011.436909.84930K562WDR43
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for ZNF273 is not available on ENCORE database.





7 RBPs can affect the splicing of ZNF273 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SEZNF273ENSG00000198039.7chr7+643774076437749664363665643637976437795864378085-0.338000.000000.00000excludedK562AKAP8L
SEZNF273ENSG00000198039.7chr7+6437740764377496643636656436379764377958643780850.296000.000030.01581includedK562WDR43
SEZNF273ENSG00000198039.7chr7+643774076437749664363665643637976437795864378085-0.332000.000000.00000excludedK562PUS1
SEZNF273ENSG00000198039.7chr7+6437740764377496643636656436379764377958643780850.459000.000000.00000includedK562HNRNPU
SEZNF273ENSG00000198039.7chr7+643774076437749664363665643637976437795864378085-0.312000.000000.00000excludedK562RBM15
SEZNF273ENSG00000198039.7chr7+643774076437749664363665643637976437795864378085-0.210000.000250.00939excludedK562AGGF1
SEZNF273ENSG00000198039.7chr7+6437740764377496643636656436379764377958643780850.367000.000000.00000includedK562HNRNPC

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for ZNF273 is not avaliable on ENCORE database.