ZFAND2A

General Information

Gene Name       : ZFAND2A
Gene ID             : ENSG00000178381.11
Essential Gene : No

Functions

Localization

Domains (AlphaFold: ZFAND2A)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878ZFAND2AENSG00000178381.118.8811.6810.28ENCSR000AEF
HepG2ZFAND2AENSG00000178381.1180.4496.2088.32ENCSR985KAT
K562ZFAND2AENSG00000178381.1115.5317.5816.55ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for ZFAND2A is not avaliable on ENCORE database.



Proteins bound to RNA
  • ZFAND2A RNA is bound by 16 proteins.  







eCLIP assay for ZFAND2A is not avaliable on ENCORE database.





16 proteins are bound to ZFAND2A RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr711926091192701-3'-UTR,CDS,intron-Distal,intron-Proximal3.405323.55700HepG2LARP4
chr711927051192796-3'-UTR,CDS,intron-Distal,intron-Proximal3.748689.18313HepG2GRWD1
chr711996081199733-5'-UTR,intron-Distal,intron-Proximal3.711815.19325HepG2LARP4
chr711995571199602-5'-UTR,intron-Distal,intron-Proximal5.380248.88638HepG2AQR
chr711995881199642-5'-UTR,intron-Distal,intron-Proximal3.550705.30777HepG2PPIG
chr711995241199604-5'-UTR,intron-Distal,intron-Proximal3.9258112.18707HepG2PRPF8
chr711978741197941-5'-UTR,intron-Distal,intron-Proximal4.193516.92290HepG2AQR
chr711997021199798-5'-UTR,intron-Distal,intron-Proximal3.630798.52472HepG2DDX3X
chr711978041197917-5'-UTR,CDS,intron-Distal,intron-Proximal3.849707.55682HepG2BUD13
chr711996531199719-5'-UTR,intron-Distal,intron-Proximal5.521539.91322HepG2AQR
chr711997141199791-5'-UTR,intron-Distal,intron-Proximal4.763674.11950K562DDX3X
chr711997191199751-5'-UTR,intron-Distal3.958763.25089HepG2AQR
chr711995951199647-5'-UTR,intron-Distal,intron-Proximal3.365244.71371HepG2GRWD1
chr711927931192857-CDS,intron-Distal3.234403.94979HepG2BCLAF1
chr711950351195104-CDS,intron-Distal,intron-Proximal3.324787.89388HepG2PRPF8
chr711928201192870-CDS,intron-Distal,intron-Proximal4.618724.92499HepG2AQR
chr711927081192763-CDS,intron-Distal,intron-Proximal4.469144.70478HepG2BCLAF1
chr711924781192543-intron-Distal,intron-Proximal4.679477.82302HepG2CSTF2
chr711936281193730-intron-Distal4.8491133.36256HepG2RBFOX2
chr711999201199998-intron-Distal,intron-Proximal3.084683.91443HepG2PPIG
chr711936331193706-intron-Distal4.765156.17200HepG2PCBP2
chr711994591199544-intron-Distal5.6230511.86869HepG2HNRNPM
chr711995291199594-intron-Distal,intron-Proximal4.950885.56495HepG2RBM22
chr711939591193972-intron-Distal7.6356354.46681HepG2RBFOX2
chr711938551193946-intron-Distal3.333845.47443HepG2PCBP2
chr711989161198989-intron-Distal4.400476.31832K562HNRNPM
chr711936291193704-intron-Distal5.5820712.68988HepG2DDX6
chr711999461199995-intron-Distal,intron-Proximal5.185268.88638HepG2AQR
chr711990331199114-intron-Distal5.201114.66899HepG2HNRNPM
chr711938761193987-intron-Distal6.4227112.64042K562DROSHA
chr711936221193694-intron-Distal3.816293.00103HepG2DROSHA
chr711998681199988-intron-Distal,intron-Proximal4.5312814.46261HepG2PRPF8
chr711990861199112-intron-Distal5.127194.53244K562HNRNPM
chr711989281198986-intron-Distal6.2148515.53477HepG2HNRNPM
chr711940381194084-intron-Distal6.0947033.53331HepG2RBFOX2
chr711941741194262-intron-Distal7.6859060.77114HepG2RBFOX2
chr711938751193934-intron-Distal6.6658274.21740HepG2RBFOX2
chr711932971193373-intron-Distal4.166904.77718HepG2ILF3
chr711994621199493-intron-Distal4.219743.04182K562HNRNPM
chr711940151194038-intron-Distal7.0505234.43317HepG2RBFOX2
chr711940841194128-intron-Distal4.5805612.89366HepG2RBFOX2
chr711938371194010-intron-Distal7.0340519.84099HepG2DROSHA
chr711941951194234-intron-Distal4.511453.37829HepG2DROSHA
chr711994931199588-intron-Distal,intron-Proximal3.105003.04371K562HNRNPM
chr711938631194032-intron-Distal4.186607.04449K562RBFOX2
chr711939721193985-intron-Distal7.2938842.00384HepG2RBFOX2
chr711990231199086-intron-Distal4.503139.00091K562HNRNPM
chr711939131194018-intron-Distal5.3299213.81151HepG2DDX6
chr711995241199587-intron-Distal,intron-Proximal4.262965.94114HepG2BUD13
chr711939851194015-intron-Distal7.4333844.60565HepG2RBFOX2
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for ZFAND2A is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for ZFAND2A is not available on ENCORE database.

  • 96 RBPs can affect the levels of ZFAND2A.  








The Knockdown/knockout RNA-Seq assay for ZFAND2A is not available on ENCORE database.





96 RBPs can affect the gene expression of ZFAND2A :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
ZFAND2AENSG00000178381.7950.17920647.869300.552402.795201.84820HepG2ABCF1
ZFAND2AENSG00000178381.7716.10160564.031800.344303.154502.51230HepG2ACO1
ZFAND2AENSG00000178381.7561.15650394.888400.506903.421802.32230HepG2ADAR
ZFAND2AENSG00000178381.7413.529801015.35720-1.2959016.7183015.52380HepG2AKAP1
ZFAND2AENSG00000178381.71080.47930840.145400.362902.357801.62890HepG2ASCC1
ZFAND2AENSG00000178381.71135.39330485.785801.2247022.2788020.83750HepG2BOP1
ZFAND2AENSG00000178381.71631.60670798.188701.0314016.5971014.89780HepG2CIRBP
ZFAND2AENSG00000178381.7800.33790533.344000.585405.157803.68060HepG2CPSF7
ZFAND2AENSG00000178381.7666.73030404.957700.719208.974307.16930HepG2YBX3
ZFAND2AENSG00000178381.7527.44690372.387400.502103.339502.16720HepG2CSTF2
ZFAND2AENSG00000178381.7678.79040478.277800.505004.093302.97110HepG2DDX24
ZFAND2AENSG00000178381.71639.70770835.441500.9727012.2713011.08020HepG2DDX6
ZFAND2AENSG00000178381.7912.00320539.603500.7570012.5044011.28050HepG2DKC1
ZFAND2AENSG00000178381.7614.63180397.625500.628206.858805.79160HepG2DNAJC21
ZFAND2AENSG00000178381.7642.69420439.062100.549603.585202.54430HepG2EEF2
ZFAND2AENSG00000178381.7672.59630461.645300.542904.768403.39450HepG2EIF3G
ZFAND2AENSG00000178381.7542.93290864.22820-0.670604.391203.53540HepG2EIF4B
ZFAND2AENSG00000178381.71050.74960785.715600.419204.716003.66870HepG2EIF4G1
ZFAND2AENSG00000178381.7947.88420752.680600.332602.025701.32130HepG2EIF4G2
ZFAND2AENSG00000178381.71426.49420918.392800.6352011.8127010.71210HepG2ETF1
ZFAND2AENSG00000178381.7335.46390465.91260-0.473902.463201.38120HepG2FASTKD2
ZFAND2AENSG00000178381.7347.95350539.90910-0.633804.118903.16830HepG2FUBP3
ZFAND2AENSG00000178381.7494.37630317.286700.639704.530503.37600HepG2GEMIN5
ZFAND2AENSG00000178381.7743.23480506.472800.553203.226501.75160HepG2HNRNPA0
ZFAND2AENSG00000178381.7672.95650401.435000.745207.450606.46680HepG2HNRNPA1
ZFAND2AENSG00000178381.7711.07430482.462400.559504.156503.39990HepG2HNRNPLL
ZFAND2AENSG00000178381.7319.72060443.57570-0.472403.748303.05310HepG2HNRNPU
ZFAND2AENSG00000178381.7894.74450686.303700.382503.273202.49120HepG2IGF2BP1
ZFAND2AENSG00000178381.7619.65830849.39920-0.455002.448501.51590HepG2KHSRP
ZFAND2AENSG00000178381.7959.26270642.727800.577603.883502.89590HepG2LARP4
ZFAND2AENSG00000178381.71273.77690895.831700.507704.195603.39080HepG2MAGOH
ZFAND2AENSG00000178381.7703.50340922.11500-0.390402.318301.73610HepG2NCBP2
ZFAND2AENSG00000178381.7979.72110789.807300.310802.382201.67550HepG2NOL12
ZFAND2AENSG00000178381.71177.00500547.222301.104809.054807.40750HepG2PABPC1
ZFAND2AENSG00000178381.7321.16010439.05640-0.451103.287302.37160HepG2PARN
ZFAND2AENSG00000178381.7635.54500810.77350-0.351303.402402.74490HepG2PCBP1
ZFAND2AENSG00000178381.7502.20710824.97730-0.7161010.358009.43040HepG2PTBP1
ZFAND2AENSG00000178381.7972.79050753.912700.367602.651902.06620HepG2PUF60
ZFAND2AENSG00000178381.7648.60470800.27940-0.303203.060602.44410HepG2PUM1
ZFAND2AENSG00000178381.71236.92320799.714900.629108.495907.34870HepG2PUM2
ZFAND2AENSG00000178381.7584.03660893.50290-0.613407.445106.49460HepG2QKI
ZFAND2AENSG00000178381.7897.79480447.468701.004507.006005.91100HepG2RAVER1
ZFAND2AENSG00000178381.7852.86400632.448200.431303.712702.73590HepG2RBM15
ZFAND2AENSG00000178381.7652.44210855.09350-0.390203.931703.21390HepG2RECQL
ZFAND2AENSG00000178381.71968.99850750.768401.3909034.6857032.88720HepG2RPLP0
ZFAND2AENSG00000178381.7612.84630439.688700.478902.226701.37790HepG2RPS10
ZFAND2AENSG00000178381.7544.20050346.814500.649905.304704.48520HepG2RPS19
ZFAND2AENSG00000178381.7708.10620491.080000.527903.645902.73110HepG2RPS2
ZFAND2AENSG00000178381.7245.37350348.00240-0.504102.395301.51890HepG2SERBP1
ZFAND2AENSG00000178381.71784.45060651.850901.452808.902607.63980HepG2SF3A3
ZFAND2AENSG00000178381.7726.93500858.93490-0.240701.815601.31980HepG2SF3B4
ZFAND2AENSG00000178381.7601.87990722.81860-0.264202.246501.60310HepG2SLBP
ZFAND2AENSG00000178381.7725.26000531.351800.448701.957901.30410HepG2SNRNP70
ZFAND2AENSG00000178381.71135.78820866.986300.389505.048304.42900HepG2SRFBP1
ZFAND2AENSG00000178381.71250.16970896.531000.479606.948106.28150HepG2SRSF1
ZFAND2AENSG00000178381.7813.25140513.832300.662304.612303.28830HepG2SRSF3
ZFAND2AENSG00000178381.7843.87220684.730300.301402.669001.98550HepG2SRSF7
ZFAND2AENSG00000178381.71122.33680729.366200.621706.778605.98300HepG2SRSF9
ZFAND2AENSG00000178381.71707.68830752.752701.1817043.8284042.37950HepG2SSB
ZFAND2AENSG00000178381.7619.57370441.565700.488503.534702.48150HepG2SUPT6H
ZFAND2AENSG00000178381.71077.03250590.044100.868104.246003.43350HepG2SUPV3L1
ZFAND2AENSG00000178381.7529.56950805.80650-0.605607.406706.56490HepG2TAF15
ZFAND2AENSG00000178381.71104.49500430.993801.3575032.4600031.08820HepG2TIAL1
ZFAND2AENSG00000178381.7570.24010348.564300.710004.431303.46900HepG2UCHL5
ZFAND2AENSG00000178381.7752.91260578.092700.381103.873903.06790HepG2UPF1
ZFAND2AENSG00000178381.71115.48780540.327001.0457010.036008.06520HepG2UPF2
ZFAND2AENSG00000178381.7910.55860558.124800.7061011.5748010.48310HepG2UTP3
ZFAND2AENSG00000178381.7892.16010580.833400.619105.211304.22450HepG2XRN2
ZFAND2AENSG00000178381.71161.58350635.790400.8694023.2231022.02210HepG2ZNF622
ZFAND2AENSG00000178381.71904.16870276.756802.7824020.7170019.28460K562AQR
ZFAND2AENSG00000178381.7557.75910192.489001.5348029.0436027.13930K562DDX47
ZFAND2AENSG00000178381.7180.13240115.702500.638502.619101.73370K562EFTUD2
ZFAND2AENSG00000178381.7303.82600212.510200.515603.010402.26540K562EIF2S2
ZFAND2AENSG00000178381.7255.5109092.929501.459102.282301.37810K562EIF3A
ZFAND2AENSG00000178381.7223.94120123.927500.853504.337803.00630K562EIF3D
ZFAND2AENSG00000178381.7279.14940106.984401.3835012.4863010.76520K562EIF3G
ZFAND2AENSG00000178381.7337.77860113.636101.5716017.5187015.30740K562EIF4A3
ZFAND2AENSG00000178381.7316.94430118.178001.4232015.4363014.11650K562FXR1
ZFAND2AENSG00000178381.7186.27610115.994900.683302.841101.40030K562GEMIN5
ZFAND2AENSG00000178381.7652.93180283.188201.2051015.8199013.97650K562GRSF1
ZFAND2AENSG00000178381.7296.81730152.248200.963106.740905.84810K562HNRNPC
ZFAND2AENSG00000178381.7285.47660149.914700.929105.232403.90530K562HNRNPM
ZFAND2AENSG00000178381.7507.85710247.126101.0391010.326908.81440K562HSPD1
ZFAND2AENSG00000178381.7327.14610133.741701.2904013.4751011.49440K562MAGOH
ZFAND2AENSG00000178381.7258.61670137.967100.906403.206002.11970K562PABPN1
ZFAND2AENSG00000178381.7194.07710119.002800.705503.048102.02140K562PCBP2
ZFAND2AENSG00000178381.7362.80310112.590701.6880017.1285015.22760K562PRPF8
ZFAND2AENSG00000178381.7243.24240129.936100.904506.299405.33200K562PTBP1
ZFAND2AENSG00000178381.7828.50540328.535501.3344021.9041019.52040K562PUF60
ZFAND2AENSG00000178381.7501.22190349.397300.520503.949802.65450K562PUM1
ZFAND2AENSG00000178381.7395.60340200.781100.978307.607606.75290K562PUS1
ZFAND2AENSG00000178381.7264.95960195.651200.437402.118701.58650K562RBM15
ZFAND2AENSG00000178381.7233.32420124.610500.904805.722904.45980K562RBM22
ZFAND2AENSG00000178381.7607.71740114.719002.4052037.9467035.14150K562RPS19
ZFAND2AENSG00000178381.7219.98210133.109400.724702.827701.81370K562RPS3
ZFAND2AENSG00000178381.7189.33620115.154900.717302.698001.38650K562RRP9
ZFAND2AENSG00000178381.7304.13710126.187201.269104.823403.08750K562SF1
ZFAND2AENSG00000178381.7259.93980172.961200.587603.302202.41460K562SF3A3
ZFAND2AENSG00000178381.7257.4499098.597301.3846011.8750010.02200K562SF3B4
ZFAND2AENSG00000178381.7261.40470144.898400.851102.828501.58620K562SNRNP200
ZFAND2AENSG00000178381.7240.37920127.377100.916105.723004.71320K562SRSF1
ZFAND2AENSG00000178381.7170.05740109.070700.640702.382301.44360K562SUPV3L1
ZFAND2AENSG00000178381.7248.84190162.525400.614503.267002.37540K562SYNCRIP
ZFAND2AENSG00000178381.7214.54170128.921600.734703.657802.83990K562TARDBP
ZFAND2AENSG00000178381.7203.2637091.926101.144706.564104.72780K562U2AF1
ZFAND2AENSG00000178381.7155.1724094.913700.709103.030802.18990K562U2AF2
ZFAND2AENSG00000178381.7323.59030185.850400.799906.593705.53880K562UPF1
ZFAND2AENSG00000178381.7269.11900165.372700.702405.033803.92180K562WDR43
ZFAND2AENSG00000178381.7363.72230132.700401.454609.365306.20620K562XRCC6
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for ZFAND2A is not available on ENCORE database.





1 RBPs can affect the splicing of ZFAND2A :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
A3SSZFAND2AENSG00000178381.7chr7-1195088119530611950881195220119729111974200.079000.000010.00014longerK562AQR
A3SSZFAND2AENSG00000178381.7chr7-1197291119748211972911197386119779311978930.073000.000640.00465longerK562AQR
MXEZFAND2AENSG00000178381.7chr7-11972291197467119779311978931195088119522011995991199789-0.060000.016750.095602includedK562AQR
MXEZFAND2AENSG00000178381.7chr7-11972291197386119779311978931195088119522011995991199814-0.064000.014070.083272includedK562AQR
MXEZFAND2AENSG00000178381.7chr7-11972291197374119779311978931195088119522011995991199814-0.060000.016750.095602includedK562AQR

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for ZFAND2A is not avaliable on ENCORE database.