VASN

General Information

Gene Name       : VASN
Gene ID             : ENSG00000168140.4
Essential Gene : No

Functions

Localization

Domains (AlphaFold: VASN)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878VASNENSG00000168140.40.000.000.00ENCSR000AEF
HepG2VASNENSG00000168140.419.921.3910.66ENCSR985KAT
K562VASNENSG00000168140.40.300.110.20ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for VASN is not avaliable on ENCORE database.



Proteins bound to RNA
  • VASN RNA is bound by 12 proteins.  







eCLIP assay for VASN is not avaliable on ENCORE database.





12 proteins are bound to VASN RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr1644329884433053+3'-UTR3.599816.89080HepG2LARP4
chr1644333994433467+3'-UTR4.1803111.06468HepG2LARP4
chr1644307904430900+3'-UTR,CDS,intron-Proximal3.715044.57180HepG2AQR
chr1644331114433185+3'-UTR4.4580620.72437HepG2AKAP1
chr1644331934433282+3'-UTR4.8138532.65912HepG2UPF1
chr1644333134433330+3'-UTR4.802725.35992HepG2UPF1
chr1644329874433053+3'-UTR4.321048.22287HepG2AKAP1
chr1644331854433268+3'-UTR5.6702528.16579HepG2AKAP1
chr1644329144432944+3'-UTR3.957616.49041HepG2RPS3
chr1644331104433236+3'-UTR3.3071512.32109HepG2LARP4
chr1644330604433150+3'-UTR6.7201756.32823HepG2UPF1
chr1644331504433186+3'-UTR6.1091345.89739HepG2UPF1
chr1644329774433052+3'-UTR4.6368116.90955HepG2UPF1
chr1644308694430961+3'-UTR,CDS,intron-Proximal4.1679825.04443HepG2DDX3X
chr1644218514421894+5'-UTR5.6877213.97750HepG2DDX3X
chr1644219404421993+5'-UTR3.7541116.31967HepG2DDX3X
chr1644218484421897+5'-UTR3.430204.11395HepG2NCBP2
chr1644218944421940+5'-UTR3.9180022.25719HepG2DDX3X
chr1644313734431414+CDS3.6519710.81522HepG2SND1
chr1644327894432841+CDS3.8568412.80079HepG2SND1
chr1644314484431505+CDS3.6781110.25631HepG2SND1
chr1644326024432664+CDS3.6768614.09591HepG2SND1
chr1644311464431233+CDS3.284256.07576HepG2IGF2BP1
chr1644313154431366+CDS4.2424915.60441HepG2SND1
chr1644314664431510+CDS4.498848.09380HepG2RPS3
chr1644313904431417+CDS3.817555.96402HepG2RPS3
chr1644315664431637+CDS3.7469516.29938HepG2SND1
chr1644328414432885+CDS4.3857211.78537HepG2SND1
chr1644327574432789+CDS4.4076313.49153HepG2SND1
chr1644325624432600+CDS3.113089.10888HepG2SND1
chr1644327344432802+CDS3.9153712.11309HepG2RPS3
chr1644328464432880+CDS4.347744.89487HepG2LARP4
chr1644317374431772+CDS3.919626.65960HepG2RPS3
chr1644326704432697+CDS4.4123610.07222HepG2SND1
chr1644324854432532+CDS3.7910813.79539HepG2SND1
chr1644326184432661+CDS4.190147.02113HepG2RPS3
chr1644328164432877+CDS4.193856.95162HepG2RPS3
chr1644269054426938+intron-Distal3.974413.69819HepG2CSTF2T
chr1644260234426062+intron-Distal3.105933.48399HepG2CSTF2T
chr1644242044424247+intron-Distal3.040313.27222HepG2CSTF2T
chr1644239684424022+intron-Distal4.129083.40229HepG2CSTF2T
chr1644232944423357+intron-Distal3.232405.59719HepG2CSTF2T
chr1644245274424589+intron-Distal3.797606.36044HepG2CSTF2T
chr1644228414422867+intron-Distal3.832793.19526HepG2CSTF2T
chr1644260974426225+intron-Distal4.279599.91366HepG2CSTF2T
chr1644240964424148+intron-Distal4.097123.91243HepG2NKRF
chr1644224864422549+intron-Distal3.615024.21158HepG2CSTF2T
chr1644249364424992+intron-Distal3.005114.24473HepG2CSTF2T
chr1644243974424454+intron-Distal4.401894.86859HepG2CSTF2T
chr1644271284427166+intron-Distal4.135384.10339HepG2CSTF2T
chr1644252854425334+intron-Distal3.495804.92676HepG2XPO5
chr1644220164422085+intron-Proximal3.855336.99039HepG2CSTF2T
chr1644220064422081+intron-Proximal4.593685.69834HepG2NKRF
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for VASN is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for VASN is not available on ENCORE database.

  • 90 RBPs can affect the levels of VASN.  








The Knockdown/knockout RNA-Seq assay for VASN is not available on ENCORE database.





90 RBPs can affect the gene expression of VASN :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
VASNENSG00000168140.4672.705001147.58110-0.7706017.1679015.92710HepG2ACO1
VASNENSG00000168140.4252.91040136.907500.885303.329702.24290HepG2ADAR
VASNENSG00000168140.41156.31610904.650400.354002.607101.41470HepG2BUD13
VASNENSG00000168140.4280.16380494.26410-0.819003.631102.76420HepG2CALR
VASNENSG00000168140.4902.890401147.25030-0.345604.022603.24950HepG2CKAP4
VASNENSG00000168140.41528.58590994.346400.620304.626003.22310HepG2CPSF7
VASNENSG00000168140.4269.66810140.403700.941507.240305.61000HepG2YBX3
VASNENSG00000168140.4394.23620289.026700.447802.871102.21850HepG2CELF1
VASNENSG00000168140.4526.68850310.791000.760909.496508.25050HepG2DAZAP1
VASNENSG00000168140.433.82750140.58660-2.0552012.3962010.22540HepG2DDX1
VASNENSG00000168140.4152.95460680.39610-2.153304.561803.77410HepG2DDX3X
VASNENSG00000168140.41453.68140584.956601.313202.088601.54520HepG2DDX6
VASNENSG00000168140.41849.847301097.903100.7526019.0602017.65110HepG2DKC1
VASNENSG00000168140.4275.08400137.847500.996703.777902.96510HepG2DNAJC21
VASNENSG00000168140.4477.77390136.657001.8057037.9536035.80390HepG2DNAJC2
VASNENSG00000168140.41024.89690561.854300.867102.509501.94380HepG2EIF2S1
VASNENSG00000168140.41173.87360915.962700.357802.999601.77520HepG2EIF2S2
VASNENSG00000168140.4449.41750293.706000.613604.100803.12110HepG2EIF4G2
VASNENSG00000168140.4667.255101121.31950-0.748905.017303.89550HepG2EWSR1
VASNENSG00000168140.4336.84450876.81640-1.3802026.2983024.02700HepG2FUBP3
VASNENSG00000168140.41425.00480580.964001.294306.326705.38430HepG2GPKOW
VASNENSG00000168140.4406.78700171.579501.245304.344102.59950HepG2HNRNPA0
VASNENSG00000168140.4286.44550167.517200.773903.282401.75690HepG2HNRNPAB
VASNENSG00000168140.4591.32720270.148801.1301018.8415017.19080HepG2HNRNPF
VASNENSG00000168140.4155.15360589.39250-1.925503.830103.01970HepG2HNRNPK
VASNENSG00000168140.4748.12880283.111801.4018035.1547033.07820HepG2HNRNPL
VASNENSG00000168140.41267.42380554.439701.192706.403805.48970HepG2HNRNPLL
VASNENSG00000168140.4420.32080841.22260-1.0010015.3292013.39850HepG2HNRNPM
VASNENSG00000168140.4325.88660153.783801.083405.268904.45330HepG2HNRNPU
VASNENSG00000168140.4587.11580266.018901.142008.369107.17300HepG2IGF2BP1
VASNENSG00000168140.41236.20790627.166300.978904.006403.21800HepG2MAGOH
VASNENSG00000168140.4599.86790986.73990-0.718009.021107.63900HepG2MSI2
VASNENSG00000168140.4574.51680828.59890-0.528304.974703.35540HepG2NAA15
VASNENSG00000168140.4194.60600645.32320-1.729503.540002.82750HepG2NCBP2
VASNENSG00000168140.4739.46360308.178801.262606.034504.90950HepG2NOL12
VASNENSG00000168140.4575.60550160.675601.840803.115001.57820HepG2NOLC1
VASNENSG00000168140.4938.897101222.39540-0.380703.067101.37370HepG2NUP35
VASNENSG00000168140.4397.68970185.220001.102302.222301.44200HepG2PABPC1
VASNENSG00000168140.41113.34370630.877400.8194017.0699015.76800HepG2PCBP1
VASNENSG00000168140.4609.44100137.161402.1515019.7672017.93860HepG2PPIL4
VASNENSG00000168140.4479.25750641.94280-0.421603.575602.97110HepG2PTBP1
VASNENSG00000168140.4902.45210294.179101.6171033.8529032.05840HepG2PUF60
VASNENSG00000168140.4625.97980312.278801.0032017.8420016.60430HepG2PUM1
VASNENSG00000168140.4905.79240312.054001.537302.965902.27110HepG2PUM2
VASNENSG00000168140.4601.521701168.87390-0.9584025.4602023.94080HepG2PUS1
VASNENSG00000168140.4302.05090695.23680-1.2027019.6748018.22350HepG2QKI
VASNENSG00000168140.4465.05510950.79450-1.031702.831702.30880HepG2RBM22
VASNENSG00000168140.4572.36200267.814001.095606.162604.67050HepG2RBM27
VASNENSG00000168140.4465.93570195.721001.2512010.520107.72250HepG2RBM47
VASNENSG00000168140.41057.47250714.419500.565707.921607.09010HepG2NELFE
VASNENSG00000168140.4888.89250665.386800.417703.502202.81810HepG2RECQL
VASNENSG00000168140.4572.87510203.681601.4918013.9828012.24400HepG2RPS3A
VASNENSG00000168140.4411.28530136.946101.586404.802103.99310HepG2SAFB2
VASNENSG00000168140.4321.968501376.80480-2.0963011.6618010.21500HepG2SF3A3
VASNENSG00000168140.41151.35690282.061002.0292040.6130038.59930HepG2SLBP
VASNENSG00000168140.4225.00650159.693500.494601.901901.35180HepG2SMN1
VASNENSG00000168140.4292.636001073.79340-1.875505.663005.01710HepG2SRFBP1
VASNENSG00000168140.4395.30790697.60610-0.819408.484307.75900HepG2SRSF1
VASNENSG00000168140.4912.16330290.452701.6509047.9160045.78070HepG2SRSF5
VASNENSG00000168140.4516.60190265.414000.9607013.1758011.85260HepG2SRSF7
VASNENSG00000168140.4428.66450567.54060-0.404903.514402.90890HepG2SRSF9
VASNENSG00000168140.4813.08790330.330201.299405.966205.11590HepG2SUCLG1
VASNENSG00000168140.4255.21830729.10140-1.514402.783201.45290HepG2SUGP2
VASNENSG00000168140.41370.14970823.258700.7348011.476609.68370HepG2SUPT6H
VASNENSG00000168140.4171.89310627.03850-1.8670038.7138036.93340HepG2TAF15
VASNENSG00000168140.4777.17040150.767702.3658019.7930018.46020HepG2TRIM56
VASNENSG00000168140.4689.28890287.391901.262003.369102.39610HepG2TUFM
VASNENSG00000168140.4471.836201043.00600-1.1444014.5456013.06570HepG2U2AF1
VASNENSG00000168140.4857.26910304.194101.494708.975407.43200HepG2UBE2L3
VASNENSG00000168140.4639.756401221.02590-0.932504.343403.50150HepG2UPF1
VASNENSG00000168140.4596.920801178.83630-0.981804.114303.40610HepG2UTP3
VASNENSG00000168140.4321.48410182.454800.817103.737602.45950HepG2XPO5
VASNENSG00000168140.4530.45490254.636101.058702.619801.91420HepG2XRN2
VASNENSG00000168140.4505.49060607.99950-0.266401.868901.30170HepG2ZC3H8
VASNENSG00000168140.4366.087701342.87980-1.8751010.474609.58170HepG2ZNF622
VASNENSG00000168140.458.4580024.490101.255102.797801.56730K562ABCF1
VASNENSG00000168140.447.7763014.653101.705003.746203.10400K562AGGF1
VASNENSG00000168140.442.2816015.247301.471402.863402.19880K562AKAP8L
VASNENSG00000168140.480.8533032.388601.319703.472702.83100K562AQR
VASNENSG00000168140.457.5971017.511001.717604.722403.14810K562CCDC124
VASNENSG00000168140.4107.2257039.490301.441005.753404.10910K562CPEB4
VASNENSG00000168140.431.831406.189302.362503.674502.61040K562EFTUD2
VASNENSG00000168140.4167.3216023.027702.8611011.9886010.64550K562EIF2S2
VASNENSG00000168140.455.6672012.711802.130605.150604.35910K562HNRNPC
VASNENSG00000168140.467.2152034.594200.958202.391801.56100K562HNRNPU
VASNENSG00000168140.429.019504.676102.633604.409803.34260K562MAGOH
VASNENSG00000168140.442.9778020.003201.103302.075601.36840K562PPIG
VASNENSG00000168140.436.061806.023002.581804.078103.16690K562PRPF8
VASNENSG00000168140.434.554404.542202.927306.037105.08850K562PTBP1
VASNENSG00000168140.494.3564044.319901.090102.964901.97360K562PUM2
VASNENSG00000168140.436.1570014.733201.295102.078801.55160K562RBM15
VASNENSG00000168140.439.042404.361703.162007.247605.80780K562RBM22
VASNENSG00000168140.419.8098048.39810-1.288702.759701.94560K562SF3A3
VASNENSG00000168140.418.524104.451602.056902.036501.41940K562SRSF1
VASNENSG00000168140.424.039105.827502.044302.329601.40140K562SUPV3L1
VASNENSG00000168140.418.517304.508102.038202.146801.51860K562TARDBP
VASNENSG00000168140.424.689404.347802.505403.419902.49500K562TIA1
VASNENSG00000168140.438.3908011.655901.719603.072702.06480K562TRIM56
VASNENSG00000168140.453.3713020.575601.375002.998701.54500K562TRIP6
VASNENSG00000168140.468.6573036.498300.911502.195801.43770K562ZC3H8
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for VASN is not available on ENCORE database.






No RBPs affect the alternative splcing events of VASN on ENCORE database.





The Knockdown/knockout RNA-Seq assay for VASN is not avaliable on ENCORE database.