TMUB2

General Information

Gene Name       : TMUB2
Gene ID             : ENSG00000168591.15
Essential Gene : No

Functions

Localization

Domains (AlphaFold: TMUB2)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878TMUB2ENSG00000168591.156.3213.049.68ENCSR000AEF
HepG2TMUB2ENSG00000168591.1523.5819.2221.40ENCSR985KAT
K562TMUB2ENSG00000168591.1517.3618.0417.70ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for TMUB2 is not avaliable on ENCORE database.



Proteins bound to RNA
  • TMUB2 RNA is bound by 20 proteins.  







eCLIP assay for TMUB2 is not avaliable on ENCORE database.





20 proteins are bound to TMUB2 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr174226883642268938+3'-UTR3.943219.63547K562PABPC4
chr174226883742268952+3'-UTR5.2319117.63353HepG2UPF1
chr174226883242268989+3'-UTR4.2767812.59064K562DDX55
chr174226685542266963+3'-UTR,5'-UTR,CDS,intron-Distal,intron-Proximal3.295505.17813K562LIN28B
chr174226854242268615+3'-UTR5.067927.21253K562UPF1
chr174226854142268619+3'-UTR3.653956.70242HepG2PCBP2
chr174226883642268911+3'-UTR3.412415.13857HepG2PABPN1
chr174226847942268536+3'-UTR5.117757.92903HepG2UPF1
chr174226694142266993+3'-UTR,5'-UTR,CDS,intron-Distal,intron-Proximal4.078505.61068HepG2PRPF8
chr174226900442269066+3'-UTR4.724435.94928K562UPF1
chr174226857142268631+3'-UTR4.6750619.08450HepG2RBFOX2
chr174226883542268916+3'-UTR5.346808.61963HepG2AKAP1
chr174226854342268623+3'-UTR5.6260613.17601HepG2AKAP1
chr174226891142268990+3'-UTR4.577815.05521HepG2PABPN1
chr174226692442267020+3'-UTR,5'-UTR,CDS,intron-Distal,intron-Proximal4.014688.90515HepG2EFTUD2
chr174226784642267913+3'-UTR,CDS,intron-Proximal3.941934.97118HepG2U2AF2
chr174226788442267960+3'-UTR,CDS3.730906.69386HepG2GRWD1
chr174226827142268329+3'-UTR,intron-Proximal3.002553.11120HepG2AKAP1
chr174226853642268622+3'-UTR6.4055922.61753HepG2UPF1
chr174226698242267028+3'-UTR,intron-Distal,intron-Proximal3.517454.58630HepG2RBM22
chr174226797842268058+3'-UTR,CDS4.171314.15208K562RBM15
chr174226883542268888+3'-UTR3.325383.08064HepG2TIA1
chr174226826842268332+3'-UTR,intron-Proximal5.043806.45671HepG2UPF1
chr174226883742268888+3'-UTR3.399405.63012HepG2LSM11
chr174226846542268543+3'-UTR,intron-Proximal5.160078.61963HepG2AKAP1
chr174226883542268892+3'-UTR3.344023.15050HepG2TIAL1
chr174226466942264744+5'-UTR,intron-Distal5.352675.39850K562DDX3X
chr174226445842264515+5'-UTR,intron-Proximal4.9997216.79021HepG2PRPF8
chr174226671942266781+CDS,intron-Distal,intron-Proximal4.248423.98315HepG2SF3B4
chr174226670542266768+CDS,intron-Distal,intron-Proximal3.746655.51372HepG2EFTUD2
chr174226667742266804+CDS,intron-Distal,intron-Proximal3.301713.92899HepG2PRPF4
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for TMUB2 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for TMUB2 is not available on ENCORE database.

  • 54 RBPs can affect the levels of TMUB2.  








The Knockdown/knockout RNA-Seq assay for TMUB2 is not available on ENCORE database.





54 RBPs can affect the gene expression of TMUB2 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
TMUB2ENSG00000168591.11849.16040496.862700.773108.667807.67850HepG2BOP1
TMUB2ENSG00000168591.11701.87940830.24790-0.242301.937501.38120HepG2CELF1
TMUB2ENSG00000168591.11844.55270651.989100.373204.308403.29570HepG2DDX19B
TMUB2ENSG00000168591.11746.13140554.123700.429103.188802.46410HepG2DDX21
TMUB2ENSG00000168591.11902.25440674.467500.419704.551803.72060HepG2DKC1
TMUB2ENSG00000168591.11674.57820536.031800.331603.113302.42820HepG2DNAJC2
TMUB2ENSG00000168591.111536.84720894.663800.780508.325307.21960HepG2EIF4A3
TMUB2ENSG00000168591.11674.673301125.21410-0.7379014.0571012.87070HepG2ETF1
TMUB2ENSG00000168591.111153.70950902.841900.353602.280001.64970HepG2FXR1
TMUB2ENSG00000168591.11692.19010517.035200.420802.336801.74500HepG2GPKOW
TMUB2ENSG00000168591.11861.52570545.981700.657906.835805.88740HepG2HNRNPA1
TMUB2ENSG00000168591.11616.09180820.50260-0.413404.512303.36830HepG2HNRNPA2B1
TMUB2ENSG00000168591.11845.79540607.305900.477803.772902.97310HepG2HNRNPC
TMUB2ENSG00000168591.11975.64170749.003500.381304.278503.40740HepG2HNRNPF
TMUB2ENSG00000168591.11652.28510848.17700-0.378902.475601.81250HepG2HNRNPK
TMUB2ENSG00000168591.11704.98770493.419000.514703.548202.84550HepG2HNRNPLL
TMUB2ENSG00000168591.11925.27890737.556700.327002.587001.88720HepG2IGF2BP1
TMUB2ENSG00000168591.11853.37810616.241000.469606.661205.57310HepG2ILF2
TMUB2ENSG00000168591.111170.19060903.157900.373602.431201.81550HepG2MAGOH
TMUB2ENSG00000168591.11750.15240603.025900.314902.660201.90010HepG2PRPF4
TMUB2ENSG00000168591.11862.46570718.065700.264302.299401.72460HepG2PUS1
TMUB2ENSG00000168591.111104.19320806.829300.452604.012503.21420HepG2RPLP0
TMUB2ENSG00000168591.11612.74850459.270900.415802.776702.16070HepG2RPS19
TMUB2ENSG00000168591.11683.36650537.255600.347003.111702.43680HepG2SAFB2
TMUB2ENSG00000168591.11632.20650488.369800.372302.138601.51270HepG2SF3B1
TMUB2ENSG00000168591.111537.813301062.248500.5337010.359509.55710HepG2SRFBP1
TMUB2ENSG00000168591.11758.61890960.32610-0.340103.305702.80030HepG2SRSF1
TMUB2ENSG00000168591.11935.19180735.864100.345703.478902.71110HepG2SRSF7
TMUB2ENSG00000168591.11528.88110781.28120-0.562907.435306.60970HepG2SRSF9
TMUB2ENSG00000168591.111122.15240922.306000.282902.980402.45240HepG2SSB
TMUB2ENSG00000168591.11555.91780863.19400-0.634808.077307.19950HepG2TAF15
TMUB2ENSG00000168591.11638.98430481.011400.409602.542801.84340HepG2TARDBP
TMUB2ENSG00000168591.11853.71500586.201300.542305.851205.17500HepG2TIAL1
TMUB2ENSG00000168591.11864.89090512.023700.756203.640402.47700HepG2UPF2
TMUB2ENSG00000168591.11589.92580711.31730-0.270001.905101.38850HepG2UTP3
TMUB2ENSG00000168591.11972.48150810.300200.263102.688102.14720HepG2ZNF622
TMUB2ENSG00000168591.111163.13610661.750600.8136010.281809.26030K562AQR
TMUB2ENSG00000168591.11472.65970292.677900.691404.858203.68860K562BOP1
TMUB2ENSG00000168591.11449.32680311.196900.529803.632202.73440K562CPSF6
TMUB2ENSG00000168591.11872.23020594.233200.553607.351406.35820K562DDX47
TMUB2ENSG00000168591.11621.32360489.364900.344302.490301.80140K562EIF2S2
TMUB2ENSG00000168591.11487.79650326.721800.578102.782101.74330K562EIF3D
TMUB2ENSG00000168591.11484.14960316.642500.612504.190603.13660K562FMR1
TMUB2ENSG00000168591.11372.49800268.386100.472802.405601.55800K562FTO
TMUB2ENSG00000168591.11127.54080194.65850-0.610002.201501.58140K562G3BP2
TMUB2ENSG00000168591.11474.86290297.113600.676405.158004.07990K562GPKOW
TMUB2ENSG00000168591.11501.20450375.202000.417602.494601.92420K562HNRNPC
TMUB2ENSG00000168591.11678.27130531.321900.352202.113701.41520K562HSPD1
TMUB2ENSG00000168591.11426.83230290.017200.557403.501802.51100K562METAP2
TMUB2ENSG00000168591.11242.33280333.72650-0.461702.247001.37000K562PCBP2
TMUB2ENSG00000168591.11531.60700366.327000.537103.985602.22590K562PHF6
TMUB2ENSG00000168591.11583.90540444.914100.392102.354801.59930K562PPIG
TMUB2ENSG00000168591.11448.19510297.070000.593203.339602.51270K562PRPF8
TMUB2ENSG00000168591.11516.28100336.412700.617804.464203.27160K562PSIP1
TMUB2ENSG00000168591.11475.96900302.502000.653803.668302.72530K562RPS19
TMUB2ENSG00000168591.11654.18980520.022200.331002.325701.57190K562SF3A3
TMUB2ENSG00000168591.11273.82720202.433300.435702.153201.39970K562SF3B4
TMUB2ENSG00000168591.11487.13650361.571200.429902.487601.81450K562TARDBP
TMUB2ENSG00000168591.11453.47530323.570000.486802.671601.75410K562TIAL1
TMUB2ENSG00000168591.11874.81620558.820600.646509.575608.33670K562UPF1
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for TMUB2 is not available on ENCORE database.





12 RBPs can affect the splicing of TMUB2 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SETMUB2ENSG00000168591.11chr17+4226527442265377422650434226511142266302422666670.350000.000120.01652includedHepG2G3BP1
SETMUB2ENSG00000168591.11chr17+422667784226695642266302422666674226786842268594-0.582000.000000.00000excludedK562SRSF1
SETMUB2ENSG00000168591.11chr17+422652744226537742264639422651114226630242266667-0.403000.000000.00030excludedK562PRPF8
SETMUB2ENSG00000168591.11chr17+422652744226537742264639422651114226630242266667-0.213000.001760.09087excludedHepG2RBM22
SETMUB2ENSG00000168591.11chr17+422650434226511142264337422644774226527442265377-0.285000.000360.00868excludedHepG2U2AF1
SETMUB2ENSG00000168591.11chr17+422652744226537742265043422651114226630242266667-0.365000.000320.03554excludedHepG2PRPF8
SETMUB2ENSG00000168591.11chr17+422652744226537742264639422651114226630242266667-0.279000.001540.04428excludedK562AKAP8L
SETMUB2ENSG00000168591.11chr17+422652744226537742264337422644774226630242266445-0.413000.001300.01528excludedK562AQR
SETMUB2ENSG00000168591.11chr17+422667914226695642266574422666674226786842267921-0.307000.000000.00016excludedHepG2SRSF1
SETMUB2ENSG00000168591.11chr17+422650434226511142264357422644774226638942266956-0.322000.002920.07014excludedHepG2SF3A3
SETMUB2ENSG00000168591.11chr17+4226527442265377422650434226511142266302422666670.350000.000750.05382includedHepG2IGF2BP3
SETMUB2ENSG00000168591.11chr17+422652744226537742264639422651114226630242266667-0.343000.001580.03942excludedK562AGGF1
SETMUB2ENSG00000168591.11chr17+4226527442265377422650434226511142266302422666670.283000.000490.09119includedHepG2FUS
RITMUB2ENSG00000168591.11chr17+422663024226695642266302422666674226677842266956-0.114000.008690.08397excludedHepG2PCBP1

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for TMUB2 is not avaliable on ENCORE database.