TMEM183A

General Information

Gene Name       : TMEM183A
Gene ID             : ENSG00000163444.11
Essential Gene : Yes

Functions

Localization

Domains (AlphaFold: TMEM183A)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878TMEM183AENSG00000163444.1143.7951.2847.53ENCSR000AEF
HepG2TMEM183AENSG00000163444.1139.8346.2043.02ENCSR985KAT
K562TMEM183AENSG00000163444.11104.34127.62115.98ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for TMEM183A is not avaliable on ENCORE database.



Proteins bound to RNA
  • TMEM183A RNA is bound by 16 proteins.  







eCLIP assay for TMEM183A is not avaliable on ENCORE database.





16 proteins are bound to TMEM183A RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr1202976524202976605+5'-UTR,CDS4.890944.54835K562NCBP2
chr1202976528202976586+5'-UTR4.702017.51958HepG2DDX3X
chr1202976536202976615+5'-UTR,CDS3.681323.74019K562DDX3X
chr1202977718202977776+CDS,intron-Proximal4.419425.26108K562SF3B4
chr1202984137202984242+CDS,intron-Proximal3.147446.45164K562BUD13
chr1202985265202985361+CDS,intron-Proximal3.543046.62672K562AQR
chr1202985231202985269+CDS,intron-Proximal5.242744.50986K562IGF2BP1
chr1202977934202978000+CDS,intron-Proximal4.364644.39669K562BUD13
chr1202977937202977946+CDS,intron-Proximal4.077075.63763K562AQR
chr1202976858202976944+CDS,intron-Proximal3.683715.05356HepG2PRPF8
chr1202976850202976927+CDS,intron-Proximal3.467665.75231K562AQR
chr1202989879202989948+CDS,intron-Proximal3.817398.47924K562SF3B4
chr1202987687202987750+CDS,intron-Proximal4.210815.47926K562AQR
chr1202976964202977026+CDS,intron-Proximal3.158643.01994K562BUD13
chr1202987608202987636+CDS,intron-Proximal5.146853.98311K562IGF2BP1
chr1202977731202977787+CDS,intron-Proximal4.027314.98250K562AQR
chr1202984003202984050+CDS,intron-Proximal3.965135.55508K562BUD13
chr1202981469202981515+intron-Distal3.981386.33179K562AGGF1
chr1202977063202977153+intron-Distal,intron-Proximal4.033876.90098K562TIA1
chr1202977285202977392+intron-Distal4.380035.65069K562U2AF2
chr1202987736202987807+intron-Distal,intron-Proximal4.384434.21433K562PRPF8
chr1202988497202988570+intron-Distal4.024144.31512K562KHSRP
chr1202989149202989268+intron-Distal3.986396.07385K562GTF2F1
chr1202989148202989224+intron-Distal3.149503.61097K562ILF3
chr1202981319202981381+intron-Distal3.133487.32408K562HNRNPL
chr1202988570202988670+intron-Distal5.021329.23289K562KHSRP
chr1202987050202987104+intron-Distal,intron-Proximal3.964897.90583K562AQR
chr1202981412202981467+intron-Distal5.2802010.25190K562HNRNPL
chr1202987872202987977+intron-Distal3.738304.71867K562TIA1
chr1202981432202981502+intron-Distal3.897973.27714HepG2HNRNPL
chr1202981316202981380+intron-Distal3.9055012.67660K562AGGF1
chr1202981467202981514+intron-Distal4.767817.24657K562HNRNPL
chr1202985282202985403+intron-Distal,intron-Proximal3.356865.25094K562PRPF8
chr1202977001202977031+intron-Proximal5.015763.62536K562AQR
chr1202984194202984222+intron-Proximal3.688278.13013K562AQR
chr1202976830202976886+intron-Proximal4.332274.59919HepG2AQR
chr1202977946202978000+intron-Proximal3.566317.16774K562AQR
chr1202976734202976787+intron-Proximal3.770936.34623HepG2RBM22
chr1202976734202976799+intron-Proximal4.268677.46483HepG2PRPF8
chr1202976737202976789+intron-Proximal3.966573.20376K562XRN2
chr1202976728202976880+intron-Proximal3.668234.87041K562GTF2F1
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for TMEM183A is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for TMEM183A is not available on ENCORE database.

  • 77 RBPs can affect the levels of TMEM183A.  








The Knockdown/knockout RNA-Seq assay for TMEM183A is not available on ENCORE database.





77 RBPs can affect the gene expression of TMEM183A :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
TMEM183AENSG00000163444.7513.52130678.89750-0.402802.226701.42010HepG2BCLAF1
TMEM183AENSG00000163444.7772.26200947.61730-0.295202.186501.49560HepG2CALR
TMEM183AENSG00000163444.71318.48580900.998300.549205.128004.09330HepG2CIRBP
TMEM183AENSG00000163444.7641.91270890.76510-0.472703.555202.78580HepG2CPSF6
TMEM183AENSG00000163444.7551.23660735.20450-0.415503.636802.46960HepG2YBX3
TMEM183AENSG00000163444.7241.82090482.59920-0.996909.897708.07090HepG2CSTF2
TMEM183AENSG00000163444.7794.889001020.58430-0.360603.582802.87050HepG2CELF1
TMEM183AENSG00000163444.7857.03940690.754700.311103.262202.36380HepG2DDX19B
TMEM183AENSG00000163444.71911.957501097.972600.8001010.220609.08530HepG2DDX3X
TMEM183AENSG00000163444.7333.99380768.21470-1.2017013.6913012.14130HepG2DDX55
TMEM183AENSG00000163444.7506.65950906.70740-0.839608.614707.60480HepG2EIF2S1
TMEM183AENSG00000163444.7609.91600478.929200.348702.092401.31800HepG2GEMIN5
TMEM183AENSG00000163444.7745.038101008.51420-0.436805.019203.82310HepG2HNRNPA2B1
TMEM183AENSG00000163444.7897.078201068.27050-0.252002.500801.81780HepG2HNRNPF
TMEM183AENSG00000163444.7656.78020949.38140-0.531604.480203.60910HepG2HNRNPK
TMEM183AENSG00000163444.7738.82410999.60520-0.436105.903104.95040HepG2HNRNPL
TMEM183AENSG00000163444.7518.17710805.33210-0.636109.456808.38670HepG2HNRNPU
TMEM183AENSG00000163444.7340.60480846.91440-1.314104.379401.45720HepG2HNRNPUL1
TMEM183AENSG00000163444.7684.16330822.62020-0.265902.379101.69220HepG2ILF2
TMEM183AENSG00000163444.7879.419501088.14080-0.307202.614201.87310HepG2NOL12
TMEM183AENSG00000163444.7541.16820718.29200-0.408503.687102.84860HepG2PPIL4
TMEM183AENSG00000163444.71301.23620893.829000.541709.073907.78970HepG2PRPF4
TMEM183AENSG00000163444.7769.28610936.61840-0.283902.360401.84840HepG2PTBP1
TMEM183AENSG00000163444.7827.650701102.66460-0.413905.961605.15850HepG2PUM1
TMEM183AENSG00000163444.7886.900301101.85550-0.313102.545501.90180HepG2PUM2
TMEM183AENSG00000163444.7835.181101014.51900-0.280602.084601.53090HepG2QKI
TMEM183AENSG00000163444.71139.64640669.286100.767804.659803.75790HepG2RAVER1
TMEM183AENSG00000163444.71544.735401218.961600.341603.990603.39790HepG2RBM22
TMEM183AENSG00000163444.7937.876001150.93340-0.295302.237901.61430HepG2RPLP0
TMEM183AENSG00000163444.7626.67070885.53010-0.498802.904102.08530HepG2RPS3A
TMEM183AENSG00000163444.71887.42680922.450601.032809.533408.22570HepG2SF3A3
TMEM183AENSG00000163444.7741.627801061.29550-0.517102.736901.96000HepG2SNRNP70
TMEM183AENSG00000163444.71887.653401376.792500.455208.818108.06170HepG2SRFBP1
TMEM183AENSG00000163444.7496.60410731.67150-0.559103.910502.01400HepG2SRP68
TMEM183AENSG00000163444.71289.392501017.909600.341003.715403.18770HepG2SRSF1
TMEM183AENSG00000163444.7887.180801049.57380-0.242502.353901.70820HepG2SRSF7
TMEM183AENSG00000163444.7732.884001195.41730-0.7059014.0816013.10470HepG2SSB
TMEM183AENSG00000163444.71396.73960914.805200.610409.826608.87450HepG2TAF15
TMEM183AENSG00000163444.7933.74550782.533800.254801.791301.37100HepG2TIAL1
TMEM183AENSG00000163444.7667.68580789.52570-0.241801.889001.40530HepG2TRIM56
TMEM183AENSG00000163444.7719.285301074.16250-0.578604.257103.20660HepG2UBE2L3
TMEM183AENSG00000163444.7615.39200451.744100.445902.756001.99760HepG2UCHL5
TMEM183AENSG00000163444.71131.84460789.817100.519008.058007.12220HepG2UTP3
TMEM183AENSG00000163444.71041.41370882.069800.239502.316201.69470HepG2ZC3H8
TMEM183AENSG00000163444.71201.80100899.723400.417506.675605.92270HepG2ZNF622
TMEM183AENSG00000163444.73905.828904904.42240-0.328503.064701.76930K562ABCF1
TMEM183AENSG00000163444.75033.362303336.083000.5933019.7035018.30540K562AGGF1
TMEM183AENSG00000163444.74951.205903665.923800.433505.473103.97810K562AKAP8
TMEM183AENSG00000163444.75003.896703471.363500.527406.862505.79640K562AKAP8L
TMEM183AENSG00000163444.75655.279704081.796500.470305.404904.63180K562AQR
TMEM183AENSG00000163444.74521.547403642.329800.311904.604203.39170K562ATP5C1
TMEM183AENSG00000163444.71933.386202335.92350-0.272903.281501.82550K562BCCIP
TMEM183AENSG00000163444.71907.195202257.39110-0.243203.123902.10820K562BCLAF1
TMEM183AENSG00000163444.73158.183503689.52100-0.224302.723701.62650K562CPEB4
TMEM183AENSG00000163444.72312.488002770.34210-0.260602.502601.75510K562CPSF6
TMEM183AENSG00000163444.71148.690401712.56770-0.576209.326107.24460K562CSTF2
TMEM183AENSG00000163444.72504.443801996.993100.326602.761101.72040K562DDX3X
TMEM183AENSG00000163444.74927.674503818.018900.368007.676706.66500K562DDX47
TMEM183AENSG00000163444.75115.872703735.323400.453606.085104.70740K562DKC1
TMEM183AENSG00000163444.71733.528102193.44910-0.339504.853703.22930K562EIF2S1
TMEM183AENSG00000163444.72557.704403208.61210-0.327104.767703.85660K562EIF2S2
TMEM183AENSG00000163444.72128.266401667.490200.351904.266503.28880K562EIF3G
TMEM183AENSG00000163444.74375.452903525.413000.311502.808101.95260K562FIP1L1
TMEM183AENSG00000163444.72909.545802169.697500.423207.499706.56880K562FXR1
TMEM183AENSG00000163444.71647.505802120.08050-0.363803.608102.28700K562HNRNPF
TMEM183AENSG00000163444.71596.153202219.51560-0.475604.477902.87630K562HNRNPK
TMEM183AENSG00000163444.73919.742802899.673200.434803.789502.68860K562HNRNPM
TMEM183AENSG00000163444.75036.640303683.921500.451106.222804.87300K562KIF1C
TMEM183AENSG00000163444.74931.156803526.470300.483603.080701.93130K562MAK16
TMEM183AENSG00000163444.72414.938602896.89290-0.262503.915002.96780K562MTPAP
TMEM183AENSG00000163444.74511.535902892.685500.641106.200204.67980K562NAA15
TMEM183AENSG00000163444.72792.846402283.107400.290602.921201.53550K562PCBP1
TMEM183AENSG00000163444.72783.512603413.95040-0.294502.045801.33100K562PCBP3
TMEM183AENSG00000163444.72214.283402618.60960-0.242002.172901.46340K562POLR2G
TMEM183AENSG00000163444.72362.800201829.520600.368903.378302.54680K562PRPF8
TMEM183AENSG00000163444.71849.716502269.17400-0.294902.822802.15240K562PTBP1
TMEM183AENSG00000163444.74188.658205443.88490-0.378106.623905.12450K562PUM2
TMEM183AENSG00000163444.76934.073303442.512201.0101014.8832013.66550K562PUS1
TMEM183AENSG00000163444.76099.824503354.315500.8626028.6129026.62670K562RBM15
TMEM183AENSG00000163444.72275.024001770.728400.361403.619402.07220K562RBM25
TMEM183AENSG00000163444.73442.935002333.265600.561208.732006.87070K562SAFB
TMEM183AENSG00000163444.72821.490303253.93920-0.205703.087402.10390K562SRPK2
TMEM183AENSG00000163444.73596.426502626.543000.453307.037005.70970K562SYNCRIP
TMEM183AENSG00000163444.71494.331002251.36320-0.591307.135005.94210K562TARDBP
TMEM183AENSG00000163444.74867.672805889.18830-0.274802.795401.38710K562UBE2L3
TMEM183AENSG00000163444.72728.592903412.84320-0.322805.950804.94240K562UPF1
TMEM183AENSG00000163444.72697.502103767.78490-0.482103.061001.79130K562UTP3
TMEM183AENSG00000163444.73447.853703036.750100.183102.455901.65590K562WDR43
TMEM183AENSG00000163444.73317.417504598.69840-0.471205.709104.39620K562ZC3H8
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for TMEM183A is not available on ENCORE database.





14 RBPs can affect the splicing of TMEM183A :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SETMEM183AENSG00000163444.7chr1+202984016202984164202977794202977938202985087202985268-0.111000.000010.00052excludedK562SRSF1
SETMEM183AENSG00000163444.7chr1+202976901202976991202976513202976702202977770202977938-0.099000.001860.03458excludedK562SF3B4
SETMEM183AENSG00000163444.7chr1+2029868832029870472029849672029852682029876082029876890.075000.000010.00089includedHepG2RBM22
SETMEM183AENSG00000163444.7chr1+202984016202984176202977794202977938202985087202985222-0.071000.001390.02708excludedHepG2U2AF1
SETMEM183AENSG00000163444.7chr1+2029868832029870472029849672029852682029876082029876890.095000.000000.00000includedK562WDR43
SETMEM183AENSG00000163444.7chr1+2029868832029870472029850872029852682029876082029876890.075000.000790.02206includedHepG2HNRNPK
SETMEM183AENSG00000163444.7chr1+2029868832029870472029850872029852682029876082029876890.073000.000000.00000includedK562AQR
SETMEM183AENSG00000163444.7chr1+202976901202977041202976513202976702202977770202977938-0.059000.004890.04563excludedK562AQR
SETMEM183AENSG00000163444.7chr1+2029868832029870472029849672029852682029876082029876890.073000.000280.02720includedK562HNRNPUL1
SETMEM183AENSG00000163444.7chr1+2029868832029870472029851312029852682029876082029876890.051000.000090.00571includedK562TARDBP
SETMEM183AENSG00000163444.7chr1+2029868832029870472029850872029852682029876082029876890.084000.000170.04036includedHepG2DDX55
SETMEM183AENSG00000163444.7chr1+2029868832029870472029849672029852682029876082029876890.078000.000810.03422includedK562SF3B1
SETMEM183AENSG00000163444.7chr1+2029868832029870472029850872029852682029876082029876890.053000.000030.00257includedK562HNRNPK
SETMEM183AENSG00000163444.7chr1+202976901202976991202976513202976702202977770202977938-0.057000.003360.09820excludedK562PTBP1
A3SSTMEM183AENSG00000163444.7chr1+202984016202984176202984019202984176202977770202977938-0.063000.000000.00005shorterK562HNRNPUL1
A3SSTMEM183AENSG00000163444.7chr1+2029850662029852682029850872029852682029840162029841760.067000.000000.00000longerK562AQR
A3SSTMEM183AENSG00000163444.7chr1+202984016202984176202984019202984176202977770202977938-0.057000.000060.00412shorterK562PUS1
MXETMEM183AENSG00000163444.7chr1+2029850662029852682029876282029876892029840162029841762029899202029900760.077000.000000.000001includedK562AQR
MXETMEM183AENSG00000163444.7chr1+2029850662029852682029876082029876892029840162029841762029899202029900760.065000.000000.000001includedK562AQR
MXETMEM183AENSG00000163444.7chr1+202984016202984176202985087202985268202977770202977938202986883202987047-0.087000.000000.000002includedK562AQR
MXETMEM183AENSG00000163444.7chr1+202985087202985268202987628202987689202984016202984176202989920202990076-0.111000.000400.004072includedK562AQR
MXETMEM183AENSG00000163444.7chr1+202985087202985268202987608202987689202984016202984176202989920202990076-0.103000.000880.008212includedK562AQR
MXETMEM183AENSG00000163444.7chr1+202984016202984176202985087202985268202977770202977938202986883202987047-0.077000.002910.060742includedK562PPIL4

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for TMEM183A is not avaliable on ENCORE database.