SALL1

General Information

Gene Name       : SALL1
Gene ID             : ENSG00000103449.11
Essential Gene : No

Functions

Localization

Domains (AlphaFold: SALL1)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878SALL1ENSG00000103449.110.010.000.01ENCSR000AEF
HepG2SALL1ENSG00000103449.1110.5812.8811.73ENCSR985KAT
K562SALL1ENSG00000103449.110.000.000.00ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for SALL1 is not avaliable on ENCORE database.



Proteins bound to RNA
  • SALL1 RNA is bound by 1 proteins.  







eCLIP assay for SALL1 is not avaliable on ENCORE database.





1 proteins are bound to SALL1 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr165117448351174563-CDS,intron-Distal4.349984.33846HepG2IGF2BP1
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for SALL1 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for SALL1 is not available on ENCORE database.

  • 96 RBPs can affect the levels of SALL1.  








The Knockdown/knockout RNA-Seq assay for SALL1 is not available on ENCORE database.





96 RBPs can affect the gene expression of SALL1 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
SALL1ENSG00000103449.7264.68870411.42060-0.636304.257602.95480HepG2AATF
SALL1ENSG00000103449.71669.323901066.412200.646407.070805.65770HepG2ABCF1
SALL1ENSG00000103449.7379.30080525.33770-0.469904.282503.55790HepG2ACO1
SALL1ENSG00000103449.7688.82660527.776600.384103.435102.59120HepG2AKAP8L
SALL1ENSG00000103449.7525.87240342.843300.617104.178903.22200HepG2ASCC1
SALL1ENSG00000103449.7555.54960876.31680-0.657509.734808.57750HepG2AUH
SALL1ENSG00000103449.7326.98220458.19810-0.486802.370101.54050HepG2BCLAF1
SALL1ENSG00000103449.7640.559401186.89410-0.8898012.8110011.64850HepG2BOP1
SALL1ENSG00000103449.7445.45930799.26170-0.843408.421706.39040HepG2BUD13
SALL1ENSG00000103449.7504.94680830.60380-0.718008.722807.46250HepG2CALR
SALL1ENSG00000103449.7615.43860374.764300.715503.607201.40940HepG2CDC40
SALL1ENSG00000103449.7879.59940325.724401.4331022.7264020.78650HepG2CIRBP
SALL1ENSG00000103449.7795.24940525.188400.598508.941007.87570HepG2CKAP4
SALL1ENSG00000103449.7183.85180325.67890-0.824906.119504.61990HepG2CSTF2
SALL1ENSG00000103449.7309.91570674.20700-1.1213019.0894017.70820HepG2CELF1
SALL1ENSG00000103449.7733.72860485.845900.594608.753007.42250HepG2DDX19B
SALL1ENSG00000103449.7564.92020396.920900.509103.030002.37930HepG2DDX3X
SALL1ENSG00000103449.7275.57430518.55890-0.912107.613606.40790HepG2DDX55
SALL1ENSG00000103449.7877.321701237.37310-0.496102.181801.31780HepG2DDX59
SALL1ENSG00000103449.7332.51120520.05360-0.645305.302803.97430HepG2DHX30
SALL1ENSG00000103449.7743.69050502.596700.565206.571305.61240HepG2DKC1
SALL1ENSG00000103449.7867.00260539.792200.683506.086204.76560HepG2EEF2
SALL1ENSG00000103449.71050.96360809.230000.377003.577702.24570HepG2EIF2S2
SALL1ENSG00000103449.7752.22880438.173700.779607.580406.14870HepG2EIF3D
SALL1ENSG00000103449.7897.33560428.593501.0659018.0557015.82170HepG2EIF3G
SALL1ENSG00000103449.7625.64910362.233900.788306.322805.36030HepG2EIF4A3
SALL1ENSG00000103449.7670.13870352.681000.926006.968905.90660HepG2EIF4B
SALL1ENSG00000103449.7975.78510685.103400.510104.466503.44730HepG2EIF4G2
SALL1ENSG00000103449.71470.00860924.009700.669708.650406.88120HepG2ESF1
SALL1ENSG00000103449.7665.858201006.18330-0.595609.224308.23280HepG2ETF1
SALL1ENSG00000103449.7708.64260513.317600.465103.751402.77940HepG2EWSR1
SALL1ENSG00000103449.7803.278401076.89340-0.422902.280101.57820HepG2FIP1L1
SALL1ENSG00000103449.7265.33290431.58620-0.701804.970403.30470HepG2FKBP4
SALL1ENSG00000103449.7502.88840286.744800.810407.546206.28740HepG2FUBP3
SALL1ENSG00000103449.7594.84250365.471700.702605.461704.51140HepG2FXR1
SALL1ENSG00000103449.7549.73260339.032300.697205.116504.22350HepG2G3BP1
SALL1ENSG00000103449.71129.76100359.921401.6502032.0849029.34760HepG2G3BP2
SALL1ENSG00000103449.7670.99660390.132000.782207.437405.99340HepG2GEMIN5
SALL1ENSG00000103449.71605.572101235.253000.378202.609501.98540HepG2GPKOW
SALL1ENSG00000103449.7417.38070289.098600.529702.365001.33580HepG2GRSF1
SALL1ENSG00000103449.71044.28990544.379600.9397013.4968012.24120HepG2HNRNPA1
SALL1ENSG00000103449.7420.18400666.22530-0.665007.919206.48440HepG2HNRNPA2B1
SALL1ENSG00000103449.7837.01300605.495400.467003.596002.81350HepG2HNRNPC
SALL1ENSG00000103449.7541.75710343.292200.658104.892503.98460HepG2HNRNPK
SALL1ENSG00000103449.7848.138901178.82030-0.475003.833703.10300HepG2HNRNPLL
SALL1ENSG00000103449.7731.15400507.584700.526403.075801.76960HepG2HSPD1
SALL1ENSG00000103449.7629.75380344.620300.869708.021706.93470HepG2IGF2BP2
SALL1ENSG00000103449.7750.64410323.405901.214705.850404.44640HepG2IGF2BP3
SALL1ENSG00000103449.7754.34390614.410900.295902.824702.08560HepG2ILF2
SALL1ENSG00000103449.7186.78770304.45850-0.704803.209201.77080HepG2ILF3
SALL1ENSG00000103449.7724.04720507.204300.513402.694101.46570HepG2KRR1
SALL1ENSG00000103449.7657.42730365.599200.846507.709106.62940HepG2MAGOH
SALL1ENSG00000103449.7650.45490367.646600.823006.645205.69930HepG2MATR3
SALL1ENSG00000103449.7418.57790871.88880-1.0586011.6816010.13700HepG2MSI2
SALL1ENSG00000103449.7819.85270376.307701.123405.422304.54980HepG2NCBP2
SALL1ENSG00000103449.7527.35220369.888900.511603.246301.71400HepG2NIP7
SALL1ENSG00000103449.7319.89830718.81800-1.1680020.0490018.12100HepG2NOL12
SALL1ENSG00000103449.71374.460101045.214400.395003.269302.45680HepG2NSUN2
SALL1ENSG00000103449.7662.92370344.726700.9433014.9083013.68140HepG2PCBP1
SALL1ENSG00000103449.7560.84640362.361900.630105.876404.11360HepG2PKM
SALL1ENSG00000103449.7241.94650399.86440-0.724804.948703.90270HepG2PRPF8
SALL1ENSG00000103449.7670.47330350.760700.9346013.9669012.92300HepG2PTBP1
SALL1ENSG00000103449.71109.00510535.085401.0513028.1944026.60860HepG2PUS1
SALL1ENSG00000103449.7770.03270502.851400.614702.947502.22130HepG2RAVER1
SALL1ENSG00000103449.71360.30880886.657900.617405.509202.94120HepG2RBM14
SALL1ENSG00000103449.7608.05170840.97170-0.467904.622803.99770HepG2RBM22
SALL1ENSG00000103449.7696.24600344.780801.0138013.5499012.12490HepG2RBM25
SALL1ENSG00000103449.7559.26960400.595500.481302.324001.35450HepG2RCC2
SALL1ENSG00000103449.7925.58640390.372601.2454026.9921025.65770HepG2NELFE
SALL1ENSG00000103449.7829.32420363.561601.1896024.3473022.83360HepG2RECQL
SALL1ENSG00000103449.7678.19930426.380900.669506.503905.60550HepG2RPS19
SALL1ENSG00000103449.7606.28110454.946100.414202.208801.48990HepG2RPS2
SALL1ENSG00000103449.7284.76830395.53280-0.474002.427201.68650HepG2RRP9
SALL1ENSG00000103449.71426.20740709.866901.006502.927701.52570HepG2SF1
SALL1ENSG00000103449.7600.37310365.207900.717008.029007.10300HepG2SF3B4
SALL1ENSG00000103449.7808.64960624.710900.372204.140103.38070HepG2SMN1
SALL1ENSG00000103449.7754.712401298.28990-0.782605.715804.58390HepG2SNRNP70
SALL1ENSG00000103449.7265.84260949.82660-1.8371059.6683058.11740HepG2SRFBP1
SALL1ENSG00000103449.7845.68460381.189501.1495023.2223022.14260HepG2SRSF1
SALL1ENSG00000103449.7829.833501255.43050-0.597304.425303.13140HepG2SRSF3
SALL1ENSG00000103449.7740.47380995.13830-0.426405.176504.27200HepG2SRSF7
SALL1ENSG00000103449.7220.74420310.11070-0.490403.077602.50130HepG2SRSF9
SALL1ENSG00000103449.7409.42180719.58780-0.813604.755603.17820HepG2STAU1
SALL1ENSG00000103449.7234.43530469.97750-1.003404.547802.99340HepG2SUB1
SALL1ENSG00000103449.7672.14260342.604600.9721014.4391013.30570HepG2TAF15
SALL1ENSG00000103449.7807.29640496.778900.700402.968001.86290HepG2TBRG4
SALL1ENSG00000103449.7250.03500345.94240-0.468402.721101.73280HepG2TFIP11
SALL1ENSG00000103449.7344.20610589.68230-0.7767010.637409.63930HepG2TRIM56
SALL1ENSG00000103449.7938.51670670.388300.485304.706903.53390HepG2TUFM
SALL1ENSG00000103449.71872.25370921.395601.0228018.3520016.68170HepG2U2AF1
SALL1ENSG00000103449.72261.51190738.200801.615107.401005.70520HepG2U2AF2
SALL1ENSG00000103449.7302.73610472.53040-0.642303.547502.40000HepG2UPF2
SALL1ENSG00000103449.7739.88400962.83240-0.380003.942702.71390HepG2UTP18
SALL1ENSG00000103449.7158.59950280.85300-0.824404.362402.97690HepG2XPO5
SALL1ENSG00000103449.7681.99790957.25180-0.489103.274602.55470HepG2ZC3H8
SALL1ENSG00000103449.7755.292901030.22680-0.447906.793106.03520HepG2ZNF622
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for SALL1 is not available on ENCORE database.





1 RBPs can affect the splicing of SALL1 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SESALL1ENSG00000103449.7chr16-511725985117605651171242511714635118507651185186-0.333000.002860.09425excludedHepG2HNRNPU

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for SALL1 is not avaliable on ENCORE database.