RP11-274B21.1

General Information

Gene Name       : RP11-274B21.1
Gene ID             :
Essential Gene : No

Functions

Localization

Domains (AlphaFold: RP11-274B21.1)


Antibody Validation


Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for RP11-274B21.1 is not avaliable on ENCORE database.



Proteins bound to RNA

  • RP11-274B21.1 RNA is bound by 21 proteins.  







eCLIP assay for RP11-274B21.1 is not avaliable on ENCORE database.





21 proteins are bound to RP11-274B21.1 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr7128182645128182712+intron-Distal4.177363.09122HepG2PTBP1
chr7128229023128229092+intron-Distal3.078734.44627K562KHSRP
chr7128229781128229884+intron-Distal5.4229712.87275K562KHSRP
chr7128228911128228937+intron-Distal3.445314.08064K562KHSRP
chr7128217804128217917+intron-Distal4.470944.05999HepG2HNRNPUL1
chr7128232184128232227+intron-Distal3.378393.88924K562PRPF8
chr7128233196128233256+intron-Distal3.612423.92720K562TARDBP
chr7128217780128217861+intron-Distal4.006663.57264HepG2GTF2F1
chr7128172384128172457+intron-Distal3.631543.01619K562FUS
chr7128228794128228834+intron-Distal3.685675.40624K562KHSRP
chr7128238018128238074+intron-Distal4.097186.25630K562HNRNPM
chr7128226914128226989+intron-Distal4.080033.45817K562MATR3
chr7128228517128228615+intron-Distal3.5286310.61601K562KHSRP
chr7128187290128187429+intron-Distal5.7116028.73560K562QKI
chr7128228553128228657+intron-Distal3.506954.28919HepG2KHSRP
chr7128227332128227367+intron-Distal4.707306.93191K562KHSRP
chr7128228767128228794+intron-Distal4.091998.17387K562KHSRP
chr7128223278128223336+intron-Distal3.764107.57903HepG2QKI
chr7128187330128187358+intron-Distal4.745036.58335HepG2QKI
chr7128258482128258583+intron-Distal3.251804.35650K562KHSRP
chr7128218022128218040+intron-Distal3.9626211.16978K562DDX24
chr7128171927128171976+intron-Distal,intron-Proximal3.899083.94390HepG2EFTUD2
chr7128218021128218049+intron-Distal3.744184.80912HepG2PPIG
chr7128229194128229274+intron-Distal3.854413.08314K562TARDBP
chr7128228937128228966+intron-Distal4.601555.62025K562KHSRP
chr7128217814128217854+intron-Distal3.880616.10522K562GPKOW
chr7128187358128187450+intron-Distal3.499919.23623HepG2QKI
chr7128235822128235892+intron-Distal4.583497.96448K562PTBP1
chr7128182681128182719+intron-Distal3.974753.16986HepG2QKI
chr7128217785128217882+intron-Distal4.094454.50569K562GTF2F1
chr7128252574128252681+intron-Distal3.036656.17398K562KHSRP
chr7128235758128235794+intron-Distal4.609563.91475K562PTBP1
chr7128238020128238061+intron-Distal5.170897.15660HepG2HNRNPM
chr7128180311128180375+intron-Distal3.794243.21162HepG2HNRNPC
chr7128183465128183563+intron-Distal5.2719010.04496HepG2QKI
chr7128256133128256232+intron-Distal3.944945.28701K562PRPF8
chr7128183459128183567+intron-Distal4.1501412.96831K562QKI
chr7128233272128233359+intron-Distal5.9260314.82580K562TARDBP
chr7128172064128172122+intron-Distal3.393064.79829K562EFTUD2
chr7128233281128233348+intron-Distal4.422473.72755K562EIF4G2
chr7128235059128235182+intron-Distal3.439263.71597K562MATR3
chr7128233359128233408+intron-Distal3.746674.90204K562TARDBP
chr7128228746128228767+intron-Distal4.272075.41654K562KHSRP
chr7128230314128230364+intron-Distal4.153424.72162K562KHSRP
chr7128230150128230207+intron-Distal3.284943.28806K562KHSRP
chr7128266348128266358+intron-Proximal3.902278.25092HepG2BCLAF1
chr7128171873128171903+intron-Proximal3.715488.69914K562AQR
chr7128171853128171873+intron-Proximal3.665666.65588K562AQR
chr7128214796128214882+intron-Proximal3.837427.85990HepG2PRPF8
chr7128173664128173727+intron-Proximal3.617858.09841HepG2BUD13
chr7128257921128257925+intron-Proximal3.413635.15500HepG2BCLAF1
chr7128220022128220088+intron-Proximal3.8443813.51777K562AQR
chr7128232042128232110+intron-Proximal4.2880011.50355HepG2PRPF8
chr7128220045128220099+intron-Proximal3.221994.66077K562U2AF2
chr7128173667128173708+intron-Proximal4.069206.86590K562SF3B4
chr7128266341128266384+intron-Proximal3.390205.05651K562U2AF2
chr7128248286128248320+intron-Proximal4.234824.98250K562AQR
chr7128231840128231879+intron-Proximal4.435877.82456K562SF3B4
chr7128171837128171927+intron-Proximal3.6390810.64371HepG2EFTUD2
chr7128220008128220071+intron-Proximal3.251766.71503K562SF3B4
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for RP11-274B21.1 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for RP11-274B21.1 is not available on ENCORE database.

  • 66 RBPs can affect the levels of RP11-274B21.1.  








The Knockdown/knockout RNA-Seq assay for RP11-274B21.1 is not available on ENCORE database.





66 RBPs can affect the gene expression of RP11-274B21.1 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
RP11-274B21.1ENSG00000242588.289.40600185.17540-1.050404.436803.24860HepG2BCCIP
RP11-274B21.1ENSG00000242588.2331.44840122.619301.4345012.1991011.01050HepG2EIF2S1
RP11-274B21.1ENSG00000242588.2298.29380135.501001.138307.920306.84070HepG2EIF4A3
RP11-274B21.1ENSG00000242588.2267.16480131.944101.017705.059104.14760HepG2EIF4B
RP11-274B21.1ENSG00000242588.2210.8273093.313101.175807.164205.93630HepG2FUBP3
RP11-274B21.1ENSG00000242588.2213.79360126.832500.753203.413402.67810HepG2G3BP1
RP11-274B21.1ENSG00000242588.2253.26930134.665100.911205.073303.85550HepG2G3BP2
RP11-274B21.1ENSG00000242588.2459.70070323.916300.505002.616701.99160HepG2GPKOW
RP11-274B21.1ENSG00000242588.2291.94530128.458301.184308.485507.31490HepG2HNRNPK
RP11-274B21.1ENSG00000242588.2272.58830121.001801.171603.696402.55870HepG2IGF2BP3
RP11-274B21.1ENSG00000242588.2259.08990129.677800.998405.202003.78940HepG2KHSRP
RP11-274B21.1ENSG00000242588.2369.72990136.786201.4344013.3765011.97800HepG2MAGOH
RP11-274B21.1ENSG00000242588.2333.11600140.784901.242409.540408.40450HepG2NCBP2
RP11-274B21.1ENSG00000242588.2255.53970125.363801.027306.358005.27440HepG2PABPC4
RP11-274B21.1ENSG00000242588.2301.46380228.056100.402502.498501.92890HepG2PUM1
RP11-274B21.1ENSG00000242588.2332.59830227.882700.545403.381802.64230HepG2PUM2
RP11-274B21.1ENSG00000242588.2290.97310147.269100.982307.457706.50680HepG2QKI
RP11-274B21.1ENSG00000242588.2289.46010367.90950-0.346001.797501.35640HepG2RBM22
RP11-274B21.1ENSG00000242588.2230.07390133.667100.783404.389703.55670HepG2RBM25
RP11-274B21.1ENSG00000242588.2229.29090151.350400.599202.923902.36980HepG2NELFE
RP11-274B21.1ENSG00000242588.2244.71050140.982700.795505.003004.20450HepG2RECQL
RP11-274B21.1ENSG00000242588.2287.41900141.575601.021508.238907.30240HepG2SF3B4
RP11-274B21.1ENSG00000242588.2278.46040206.005200.434702.472301.80350HepG2SLBP
RP11-274B21.1ENSG00000242588.2514.13910415.534200.307101.896601.45810HepG2SRFBP1
RP11-274B21.1ENSG00000242588.2311.62320212.120500.554803.741603.03460HepG2SRSF5
RP11-274B21.1ENSG00000242588.2213.22170120.238800.826405.428604.69990HepG2SRSF9
RP11-274B21.1ENSG00000242588.2337.90000241.228200.486103.293202.62670HepG2SUCLG1
RP11-274B21.1ENSG00000242588.2231.59490132.861600.801605.024604.30590HepG2TAF15
RP11-274B21.1ENSG00000242588.2203.02910122.052600.734104.023503.02120HepG2TIA1
RP11-274B21.1ENSG00000242588.257.13430107.07010-0.906102.929302.15080HepG2UCHL5
RP11-274B21.1ENSG00000242588.274.61710165.97650-1.153404.051902.82760HepG2UPF2
RP11-274B21.1ENSG00000242588.2151.11630238.25420-0.656802.832101.71980HepG2XPO5
RP11-274B21.1ENSG00000242588.283.08820178.41610-1.102504.879903.92470HepG2XRN2
RP11-274B21.1ENSG00000242588.2998.098601258.54750-0.334503.625802.99190K562AGGF1
RP11-274B21.1ENSG00000242588.2891.059301382.97000-0.634207.814705.92710K562AKAP8
RP11-274B21.1ENSG00000242588.2855.082701309.57980-0.615007.196106.10010K562AKAP8L
RP11-274B21.1ENSG00000242588.2790.887901150.09970-0.540203.786802.30150K562APOBEC3C
RP11-274B21.1ENSG00000242588.2938.850801374.07220-0.549508.085406.40250K562ATP5C1
RP11-274B21.1ENSG00000242588.2904.728701504.02000-0.7333012.426709.95690K562CCDC124
RP11-274B21.1ENSG00000242588.2825.539601077.45950-0.384202.576801.94510K562DDX47
RP11-274B21.1ENSG00000242588.2852.700001409.17600-0.7247013.7164011.44600K562DKC1
RP11-274B21.1ENSG00000242588.2836.94230613.054200.449003.576502.64620K562EIF4A3
RP11-274B21.1ENSG00000242588.2877.57700713.353300.298802.419601.36050K562GLRX3
RP11-274B21.1ENSG00000242588.2513.00950813.29560-0.664806.904305.70300K562GRSF1
RP11-274B21.1ENSG00000242588.2660.38000487.120900.438903.093402.46650K562HNRNPC
RP11-274B21.1ENSG00000242588.2781.09230973.72170-0.318002.329001.36940K562HNRNPL
RP11-274B21.1ENSG00000242588.2359.99980492.44150-0.452002.344701.49180K562HNRNPM
RP11-274B21.1ENSG00000242588.21004.355801389.77710-0.468604.776403.64020K562KIF1C
RP11-274B21.1ENSG00000242588.2916.111501330.37030-0.538206.032304.21840K562MAK16
RP11-274B21.1ENSG00000242588.2951.153101556.90340-0.7109011.016709.00500K562MBNL1
RP11-274B21.1ENSG00000242588.2279.26120461.01630-0.723204.657702.85380K562NONO
RP11-274B21.1ENSG00000242588.2281.19750490.76300-0.803406.206403.52220K562PA2G4
RP11-274B21.1ENSG00000242588.2298.82700443.23060-0.568703.331201.32880K562PES1
RP11-274B21.1ENSG00000242588.2472.38420679.64600-0.524804.045303.02950K562PPIG
RP11-274B21.1ENSG00000242588.2238.72780455.20230-0.931107.768706.50610K562PRPF8
RP11-274B21.1ENSG00000242588.2381.35120628.84260-0.721607.996306.90790K562PTBP1
RP11-274B21.1ENSG00000242588.2925.278701422.12110-0.620106.882405.59260K562PUF60
RP11-274B21.1ENSG00000242588.21146.148001482.09030-0.370802.867801.89050K562PUM2
RP11-274B21.1ENSG00000242588.2874.477201298.71470-0.570604.731004.04560K562PUS1
RP11-274B21.1ENSG00000242588.2900.234501265.42590-0.491306.058105.20700K562RBM15
RP11-274B21.1ENSG00000242588.2262.45150465.39210-0.826405.295103.45460K562RRP9
RP11-274B21.1ENSG00000242588.2356.18260507.06910-0.509603.466902.24900K562SAFB
RP11-274B21.1ENSG00000242588.21132.86760718.788700.656202.446501.32190K562SNRNP200
RP11-274B21.1ENSG00000242588.2378.63190616.48120-0.703306.825305.72430K562SRSF1
RP11-274B21.1ENSG00000242588.2357.27370570.85730-0.676106.651805.36980K562SYNCRIP
RP11-274B21.1ENSG00000242588.2382.23910492.28350-0.365002.258001.53330K562U2AF2
RP11-274B21.1ENSG00000242588.2991.73930756.030800.391403.393002.42710K562WDR3
RP11-274B21.1ENSG00000242588.2995.36120786.209200.340203.907702.91330K562WDR43
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for RP11-274B21.1 is not available on ENCORE database.





28 RBPs can affect the splicing of RP11-274B21.1 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SERP11-274B21.1ENSG00000242588.2chr7+128218006128218087128214773128214845128218943128218987-0.343000.000070.00222excludedK562SF3B4
SERP11-274B21.1ENSG00000242588.2chr7+128265850128265909128263628128263835128266348128266584-0.210000.001370.04036excludedK562AKAP8L
SERP11-274B21.1ENSG00000242588.2chr7+128249540128249633128231903128232071128255913128256024-0.209000.000000.00008excludedK562AKAP8L
SERP11-274B21.1ENSG00000242588.2chr7+1282658501282659091282636281282638351282663481282665090.313000.000040.00786includedK562XRCC6
SERP11-274B21.1ENSG00000242588.2chr7+128214773128214845128173705128173784128231903128232071-0.069000.004210.04035excludedK562AQR
SERP11-274B21.1ENSG00000242588.2chr7+1282658501282659091282636281282638351282663481282665840.287000.000020.00155includedK562FXR1
SERP11-274B21.1ENSG00000242588.2chr7+1282180061282180871282147731282148451282189431282189870.208000.002540.07959includedK562FXR1
SERP11-274B21.1ENSG00000242588.2chr7+128249540128249633128231903128232071128255913128256024-0.285000.000000.00000excludedK562PUS1
SERP11-274B21.1ENSG00000242588.2chr7+128218006128218087128214773128214845128218943128218987-0.248000.000000.00006excludedK562PUS1
SERP11-274B21.1ENSG00000242588.2chr7+1281722651281723921281717511281718541281736981281737840.222000.000010.00073includedHepG2SF3A3
SERP11-274B21.1ENSG00000242588.2chr7+1282481711282482671282319031282320711282495401282496330.083000.000540.07927includedK562EIF4G2
SERP11-274B21.1ENSG00000242588.2chr7+128218006128218087128214773128214845128218943128218987-0.244000.000180.03512excludedK562SRSF7
SERP11-274B21.1ENSG00000242588.2chr7+128265850128265909128263628128263835128266348128266509-0.221000.000110.00609excludedK562UTP18
SERP11-274B21.1ENSG00000242588.2chr7+128249540128249633128231903128232071128255913128256024-0.207000.000000.00019excludedK562UTP18
SERP11-274B21.1ENSG00000242588.2chr7+128218006128218087128214773128214845128218943128218987-0.200000.000010.00089excludedK562UTP18
SERP11-274B21.1ENSG00000242588.2chr7+128249540128249633128231903128232071128255913128256024-0.159000.005380.07700excludedK562U2AF2
SERP11-274B21.1ENSG00000242588.2chr7+128218006128218087128214773128214845128218943128218987-0.268000.001610.05408excludedK562HNRNPU
SERP11-274B21.1ENSG00000242588.2chr7+128249540128249633128231903128232071128255913128256024-0.188000.000000.00021excludedK562RBM15
SERP11-274B21.1ENSG00000242588.2chr7+128218006128218087128214773128214845128218943128218987-0.157000.003690.07254excludedK562RBM15
SERP11-274B21.1ENSG00000242588.2chr7+1282481711282482671282319031282320711282495401282496330.093000.001840.04452includedK562AGGF1
SERP11-274B21.1ENSG00000242588.2chr7+128249540128249633128231903128232071128255913128256024-0.303000.000000.00000excludedK562AGGF1
SERP11-274B21.1ENSG00000242588.2chr7+128218006128218087128214773128214845128218943128218987-0.204000.000020.00098excludedK562AGGF1
SERP11-274B21.1ENSG00000242588.2chr7+1282495401282496331282319031282320711282559131282560240.172000.000040.00314includedK562SF3B1
SERP11-274B21.1ENSG00000242588.2chr7+1282658501282659091282636281282638351282663481282665090.276000.000330.01690includedK562PTBP1
SERP11-274B21.1ENSG00000242588.2chr7+1282658501282659091282636281282638351282663481282665840.298000.000400.00883includedK562HNRNPC
SERP11-274B21.1ENSG00000242588.2chr7+1282481711282482671282319031282320711282495401282496330.072000.001050.02009includedK562HNRNPC
A3SSRP11-274B21.1ENSG00000242588.2chr7+1282180061282180871282180171282180871282147731282148450.816000.000070.03740longerHepG2IGF2BP3
A3SSRP11-274B21.1ENSG00000242588.2chr7+1282180061282180871282180171282180871282147731282148450.863000.000100.05973longerHepG2KHSRP
MXERP11-274B21.1ENSG00000242588.2chr7+1282147731282148451282200521282201481281737051281737841282319031282320710.138000.000360.034411includedK562LARP4
MXERP11-274B21.1ENSG00000242588.2chr7+128218006128218087128218943128218987128214773128214845128231903128232071-0.197000.001560.095352includedK562HNRNPL
MXERP11-274B21.1ENSG00000242588.2chr7+128218006128218087128220052128220148128214773128214845128231903128232071-0.172000.000880.068982includedK562HNRNPL
MXERP11-274B21.1ENSG00000242588.2chr7+128214773128214845128218006128218087128173705128173784128218943128218987-0.162000.007460.093562includedHepG2FTO
MXERP11-274B21.1ENSG00000242588.2chr7+1282319031282320711282495401282496331282200521282201481282559131282560240.117000.009100.082291includedK562DROSHA
MXERP11-274B21.1ENSG00000242588.2chr7+1282189431282189871282200521282201481282147731282148451282319031282320710.120000.002200.037651includedK562PUS1
MXERP11-274B21.1ENSG00000242588.2chr7+1282147731282148451282319031282320711281736981281737841282481711282482670.110000.007050.088931includedK562PUS1
MXERP11-274B21.1ENSG00000242588.2chr7+1282147731282148451282180061282180871281736981281737841282189431282189870.139000.000010.000591includedK562PUS1
MXERP11-274B21.1ENSG00000242588.2chr7+128263628128263835128265850128265909128262532128262748128266348128266584-0.162000.000810.036272includedK562FXR1
MXERP11-274B21.1ENSG00000242588.2chr7+128262532128262748128263628128263835128259099128259231128265850128265909-0.339000.000050.022342includedK562SDAD1
MXERP11-274B21.1ENSG00000242588.2chr7+128231903128232071128248171128248267128214773128214845128249540128249633-0.111000.000780.063232includedK562PUM1
MXERP11-274B21.1ENSG00000242588.2chr7+128263628128263835128265850128265909128262532128262748128266348128266584-0.337000.000040.001652includedK562HNRNPC
MXERP11-274B21.1ENSG00000242588.2chr7+1282147731282148451282495401282496331281737051281737841282559131282560240.139000.002620.083851includedK562HNRNPU
MXERP11-274B21.1ENSG00000242588.2chr7+128231903128232071128249540128249633128220052128220148128255913128256024-0.171000.003550.081142includedK562DHX30
MXERP11-274B21.1ENSG00000242588.2chr7+1282189431282189871282200521282201481282147731282148451282319031282320710.214000.003860.052991includedK562SF3B4
MXERP11-274B21.1ENSG00000242588.2chr7+1282319031282320711282481711282482671282147731282148451282495401282496330.212000.001040.086011includedK562NPM1
MXERP11-274B21.1ENSG00000242588.2chr7+1282319031282320711282495401282496331282200521282201481282559131282560240.140000.004790.061581includedK562HNRNPUL1
MXERP11-274B21.1ENSG00000242588.2chr7+1282319031282320711282481711282482671282147731282148451282495401282496330.156000.002610.042161includedK562HNRNPUL1

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for RP11-274B21.1 is not avaliable on ENCORE database.