RP11-1407O15.2

General Information

Gene Name       : RP11-1407O15.2
Gene ID             :
Essential Gene : No

Functions

Localization

Domains (AlphaFold: RP11-1407O15.2)


Antibody Validation


Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for RP11-1407O15.2 is not avaliable on ENCORE database.



Proteins bound to RNA

  • RP11-1407O15.2 RNA is bound by 17 proteins.  







eCLIP assay for RP11-1407O15.2 is not avaliable on ENCORE database.





17 proteins are bound to RP11-1407O15.2 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr173635723436357284-3'-UTR,5'-UTR,CDS,intron-Distal,intron-Proximal5.0936028.76148HepG2U2AF2
chr173635894536359033-3'-UTR,CDS,intron-Distal3.133679.90229HepG2BCLAF1
chr173635808136358163-3'-UTR,5'-UTR,CDS,intron-Distal,intron-Proximal3.771096.93060K562EFTUD2
chr173635811636358152-3'-UTR,5'-UTR,CDS,intron-Distal,intron-Proximal4.1916523.66170HepG2PRPF8
chr173635877836358877-3'-UTR,CDS,intron-Distal,intron-Proximal3.6841410.17713HepG2PRPF8
chr173635723136357282-3'-UTR,5'-UTR,CDS,intron-Distal,intron-Proximal3.915728.27013K562U2AF2
chr173635812136358166-3'-UTR,5'-UTR,CDS,intron-Distal,intron-Proximal3.114135.41373HepG2PPIG
chr173635811236358166-3'-UTR,5'-UTR,CDS,intron-Distal,intron-Proximal3.8192019.57559HepG2U2AF2
chr173635808336358171-3'-UTR,5'-UTR,CDS,intron-Distal,intron-Proximal4.040157.03098HepG2EFTUD2
chr173635884436358942-3'-UTR,CDS,intron-Distal3.6276613.50876HepG2BCLAF1
chr173635807936358167-3'-UTR,5'-UTR,CDS,intron-Distal,intron-Proximal3.569237.52282K562PRPF8
chr173635190136351997-3'-UTR,5'-UTR,CDS,intron-Distal,intron-Proximal3.0678712.35960HepG2BCLAF1
chr173635191636352008-3'-UTR,5'-UTR,CDS,intron-Distal,intron-Proximal3.167154.44630K562ZNF622
chr173635191536351997-3'-UTR,5'-UTR,CDS,intron-Distal,intron-Proximal3.409843.12941K562UCHL5
chr173641323736413335-5'-UTR,intron-Distal,intron-Proximal5.5733213.65571HepG2HNRNPK
chr173636507836365160-5'-UTR,CDS,intron-Distal,intron-Proximal3.545509.41803HepG2BCLAF1
chr173641321836413330-5'-UTR,intron-Distal,intron-Proximal4.400644.80949K562HNRNPK
chr173641322436413339-5'-UTR,intron-Distal,intron-Proximal5.7242615.88042K562PCBP1
chr173641325236413344-5'-UTR,intron-Distal,intron-Proximal4.2523513.84781HepG2PCBP2
chr173636507036365151-5'-UTR,CDS,intron-Distal,intron-Proximal3.305323.61259K562ZNF622
chr173636506836365159-5'-UTR,CDS,intron-Distal,intron-Proximal3.167934.69671HepG2PPIG
chr173635551736355546-intron-Distal3.282463.00589HepG2HNRNPC
chr173635003836350208-intron-Distal4.9569715.14933HepG2HNRNPK
chr173635807936358116-intron-Distal,intron-Proximal6.4631916.30191HepG2PRPF8
chr173636299836363057-intron-Distal3.330003.35103HepG2QKI
chr173636410436364158-intron-Distal4.224996.44495HepG2U2AF2
chr173635516436355233-intron-Distal3.147833.09653HepG2ILF3
chr173636190336361960-intron-Distal,intron-Proximal3.543494.79415HepG2KHSRP
chr173636496736365020-intron-Distal,intron-Proximal3.067877.02852K562KHSRP
chr173635153236351594-intron-Distal3.760603.19526HepG2CSTF2T
chr173641236436412418-intron-Distal3.269453.01293HepG2NKRF
chr173635073236350819-intron-Distal3.444525.17145HepG2HNRNPL
chr173636497236365029-intron-Distal,intron-Proximal3.635684.93376K562PRPF8
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for RP11-1407O15.2 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for RP11-1407O15.2 is not available on ENCORE database.

  • 97 RBPs can affect the levels of RP11-1407O15.2.  








The Knockdown/knockout RNA-Seq assay for RP11-1407O15.2 is not available on ENCORE database.





97 RBPs can affect the gene expression of RP11-1407O15.2 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
RP11-1407O15.2ENSG00000174093.6654.52410919.28530-0.490105.438104.64180HepG2ACO1
RP11-1407O15.2ENSG00000174093.6380.80610548.22730-0.525703.267702.41460HepG2ASCC1
RP11-1407O15.2ENSG00000174093.6375.84360595.87050-0.664904.548803.34620HepG2BCCIP
RP11-1407O15.2ENSG00000174093.6406.16860568.09430-0.484103.604802.74030HepG2CALR
RP11-1407O15.2ENSG00000174093.6595.66260919.23950-0.625907.472606.47950HepG2CKAP4
RP11-1407O15.2ENSG00000174093.6608.946301077.05460-0.822705.864304.75040HepG2CNOT7
RP11-1407O15.2ENSG00000174093.6737.86230417.188200.822608.526107.37610HepG2CPSF6
RP11-1407O15.2ENSG00000174093.6787.58030931.08640-0.241501.895201.34450HepG2CELF1
RP11-1407O15.2ENSG00000174093.6791.351001001.21790-0.339404.123903.24750HepG2DAZAP1
RP11-1407O15.2ENSG00000174093.6860.688601117.47360-0.376702.956001.61820HepG2DDX47
RP11-1407O15.2ENSG00000174093.6361.84190625.23320-0.7890010.106808.82970HepG2DNAJC21
RP11-1407O15.2ENSG00000174093.6422.71560619.67810-0.551806.666205.71570HepG2DNAJC2
RP11-1407O15.2ENSG00000174093.6825.83730524.115000.655905.531204.71000HepG2EIF2S1
RP11-1407O15.2ENSG00000174093.6364.16360505.27380-0.472502.619501.73740HepG2EIF3D
RP11-1407O15.2ENSG00000174093.6594.42640898.44270-0.595906.470705.19470HepG2EWSR1
RP11-1407O15.2ENSG00000174093.6574.53080815.57550-0.505403.063702.25760HepG2FIP1L1
RP11-1407O15.2ENSG00000174093.6482.35100320.607900.589204.212703.25260HepG2FUBP3
RP11-1407O15.2ENSG00000174093.6829.68040584.487700.505303.689202.89900HepG2FXR1
RP11-1407O15.2ENSG00000174093.6716.38820542.126700.402002.271601.66540HepG2G3BP1
RP11-1407O15.2ENSG00000174093.6822.80050575.630300.515303.818302.76180HepG2G3BP2
RP11-1407O15.2ENSG00000174093.6647.30610932.92350-0.527303.229901.58840HepG2HNRNPD
RP11-1407O15.2ENSG00000174093.6919.71360549.119100.744007.864006.73340HepG2HNRNPK
RP11-1407O15.2ENSG00000174093.6427.59440697.46620-0.7059010.244309.14050HepG2HNRNPU
RP11-1407O15.2ENSG00000174093.6417.27460551.03450-0.401102.234001.61970HepG2IGF2BP2
RP11-1407O15.2ENSG00000174093.6533.31770712.44060-0.417804.737503.79970HepG2ILF2
RP11-1407O15.2ENSG00000174093.6665.001801049.96450-0.658904.395202.70580HepG2ILF3
RP11-1407O15.2ENSG00000174093.6883.26400554.294100.672104.788003.43250HepG2KHSRP
RP11-1407O15.2ENSG00000174093.6571.59550840.43780-0.556106.432904.90950HepG2KIF1C
RP11-1407O15.2ENSG00000174093.6376.55100587.94280-0.642804.214803.45250HepG2MATR3
RP11-1407O15.2ENSG00000174093.6298.57830528.82320-0.824704.483203.16310HepG2METAP2
RP11-1407O15.2ENSG00000174093.6645.01840928.03660-0.524803.100901.58600HepG2NKRF
RP11-1407O15.2ENSG00000174093.6313.67360538.05840-0.778503.955002.62950HepG2NONO
RP11-1407O15.2ENSG00000174093.6236.63740377.74600-0.674703.144001.44290HepG2PA2G4
RP11-1407O15.2ENSG00000174093.6510.14010690.38630-0.436504.249303.22640HepG2PARN
RP11-1407O15.2ENSG00000174093.6283.16050417.84670-0.561404.009302.52040HepG2PKM
RP11-1407O15.2ENSG00000174093.6448.38820622.08610-0.472404.321003.42110HepG2PPIL4
RP11-1407O15.2ENSG00000174093.6321.03820451.88420-0.493202.708301.90810HepG2PRPF8
RP11-1407O15.2ENSG00000174093.6672.47900947.69630-0.494902.580602.00250HepG2PUF60
RP11-1407O15.2ENSG00000174093.6709.125101005.99830-0.504505.842905.04590HepG2PUM1
RP11-1407O15.2ENSG00000174093.6736.28190936.37420-0.346803.414802.74830HepG2PUS1
RP11-1407O15.2ENSG00000174093.61033.25070699.392500.562902.734702.03400HepG2RAVER1
RP11-1407O15.2ENSG00000174093.6823.456101089.67150-0.404103.721902.74350HepG2RBM15
RP11-1407O15.2ENSG00000174093.6811.342201071.69540-0.401504.524403.90470HepG2RBM22
RP11-1407O15.2ENSG00000174093.6908.73270525.618300.7897010.380909.13370HepG2RBM25
RP11-1407O15.2ENSG00000174093.6733.99250595.133100.302502.200501.70700HepG2NELFE
RP11-1407O15.2ENSG00000174093.6892.48750554.293400.6871010.321009.24600HepG2RECQL
RP11-1407O15.2ENSG00000174093.6279.92180491.64370-0.812607.509806.55730HepG2RPS19
RP11-1407O15.2ENSG00000174093.6549.67100815.03070-0.568302.066501.36880HepG2RPS2
RP11-1407O15.2ENSG00000174093.6769.776601081.28620-0.490202.963902.13720HepG2RPS3A
RP11-1407O15.2ENSG00000174093.6464.14520621.13120-0.420303.994303.24430HepG2SAFB2
RP11-1407O15.2ENSG00000174093.6341.88310493.45680-0.529403.231902.21280HepG2SERBP1
RP11-1407O15.2ENSG00000174093.6495.635301039.94410-1.069203.435801.88490HepG2SF1
RP11-1407O15.2ENSG00000174093.6544.37180863.82730-0.666203.086202.37380HepG2SF3A3
RP11-1407O15.2ENSG00000174093.6795.94400556.745700.515505.823705.01900HepG2SF3B4
RP11-1407O15.2ENSG00000174093.6507.660001008.30950-0.990002.779201.33010HepG2SFPQ
RP11-1407O15.2ENSG00000174093.6453.19240724.35510-0.6766010.480709.35930HepG2SMN1
RP11-1407O15.2ENSG00000174093.6438.33800928.44650-1.082803.722302.14770HepG2SNRNP200
RP11-1407O15.2ENSG00000174093.6696.41910935.68420-0.426104.995904.19440HepG2SRSF5
RP11-1407O15.2ENSG00000174093.6671.35540472.780000.505805.652304.91230HepG2SRSF9
RP11-1407O15.2ENSG00000174093.6636.74290940.51790-0.562703.837802.52290HepG2STIP1
RP11-1407O15.2ENSG00000174093.6767.239201064.15460-0.472007.041406.12810HepG2SUCLG1
RP11-1407O15.2ENSG00000174093.6718.29370987.87140-0.459702.645101.34990HepG2SUGP2
RP11-1407O15.2ENSG00000174093.6434.31100550.77140-0.342702.150001.31460HepG2SUPT6H
RP11-1407O15.2ENSG00000174093.6399.76370583.21150-0.544903.274102.54570HepG2SUPV3L1
RP11-1407O15.2ENSG00000174093.61018.33770522.349000.9630012.4053011.34760HepG2TAF15
RP11-1407O15.2ENSG00000174093.6277.57130390.89330-0.493902.399301.46320HepG2TFIP11
RP11-1407O15.2ENSG00000174093.6421.13350683.77430-0.699209.770008.80890HepG2TRIM56
RP11-1407O15.2ENSG00000174093.6644.37330979.94220-0.604804.584603.48850HepG2UBE2L3
RP11-1407O15.2ENSG00000174093.6447.39710739.62410-0.7252010.307409.26860HepG2UTP3
RP11-1407O15.2ENSG00000174093.6580.02900968.49730-0.739605.737404.16030HepG2XPO5
RP11-1407O15.2ENSG00000174093.6439.88960574.10840-0.384202.081901.44480HepG2XRN2
RP11-1407O15.2ENSG00000174093.6727.970801000.71420-0.459105.677904.91090K562AGGF1
RP11-1407O15.2ENSG00000174093.6655.690101046.78160-0.674906.940406.08010K562AQR
RP11-1407O15.2ENSG00000174093.6972.068901195.95240-0.299002.513901.40100K562CCDC124
RP11-1407O15.2ENSG00000174093.6584.13360449.506700.377902.453601.71110K562CPSF6
RP11-1407O15.2ENSG00000174093.6598.18530907.77610-0.601708.869907.78590K562DDX47
RP11-1407O15.2ENSG00000174093.6911.658001120.57130-0.297702.812701.93060K562DKC1
RP11-1407O15.2ENSG00000174093.6320.90490474.76420-0.565103.483202.45350K562EFTUD2
RP11-1407O15.2ENSG00000174093.6140.77310265.07460-0.913003.593102.43200K562EIF3A
RP11-1407O15.2ENSG00000174093.6303.63680512.62290-0.755607.832106.49860K562EIF3G
RP11-1407O15.2ENSG00000174093.6427.82800554.12350-0.373202.716601.57860K562EIF4B
RP11-1407O15.2ENSG00000174093.6423.74480553.67380-0.385802.262101.49530K562FIP1L1
RP11-1407O15.2ENSG00000174093.6605.35780453.193900.417603.102901.67400K562FUS
RP11-1407O15.2ENSG00000174093.6408.88140639.91110-0.646207.297906.37890K562FXR1
RP11-1407O15.2ENSG00000174093.6619.30180868.67440-0.488204.049403.13740K562GRSF1
RP11-1407O15.2ENSG00000174093.6531.90660750.64420-0.497003.643902.73480K562HSPD1
RP11-1407O15.2ENSG00000174093.6599.64100760.41260-0.342702.524601.72010K562MAGOH
RP11-1407O15.2ENSG00000174093.6593.09030758.89010-0.355602.609201.71460K562MATR3
RP11-1407O15.2ENSG00000174093.6894.626501237.98500-0.468604.782903.52490K562MBNL1
RP11-1407O15.2ENSG00000174093.6264.05880467.72890-0.824806.320404.20950K562NONO
RP11-1407O15.2ENSG00000174093.6891.87300584.845400.608702.426901.51300K562PABPN1
RP11-1407O15.2ENSG00000174093.6253.67730361.98480-0.512902.935302.10980K562POLR2G
RP11-1407O15.2ENSG00000174093.6465.00720628.54980-0.434802.854702.02000K562PPIG
RP11-1407O15.2ENSG00000174093.6227.56160461.99950-1.021608.908207.56000K562PRPF8
RP11-1407O15.2ENSG00000174093.6333.95680447.34560-0.421702.104601.32680K562PSIP1
RP11-1407O15.2ENSG00000174093.6565.48470738.77860-0.385703.017602.32760K562PTBP1
RP11-1407O15.2ENSG00000174093.6835.824501358.83780-0.701108.064306.66660K562PUF60
RP11-1407O15.2ENSG00000174093.61154.736701445.52730-0.324003.289002.12110K562PUM1
RP11-1407O15.2ENSG00000174093.61186.539201416.13650-0.255202.494601.58120K562PUM2
RP11-1407O15.2ENSG00000174093.6521.78360708.47260-0.441303.271002.35070K562RBM22
RP11-1407O15.2ENSG00000174093.6526.31180745.53730-0.502403.834602.52230K562NELFE
RP11-1407O15.2ENSG00000174093.6234.47510470.61880-1.005108.023206.61920K562RPS19
RP11-1407O15.2ENSG00000174093.6286.29290500.63820-0.806303.490002.35440K562RPS3
RP11-1407O15.2ENSG00000174093.6267.69740472.39730-0.819405.117603.30360K562RRP9
RP11-1407O15.2ENSG00000174093.6203.86620322.55740-0.661903.950202.64670K562SAFB
RP11-1407O15.2ENSG00000174093.6558.76580691.51230-0.307502.076801.33770K562SF3B4
RP11-1407O15.2ENSG00000174093.6404.60790724.23460-0.8399010.247708.90150K562SRSF1
RP11-1407O15.2ENSG00000174093.6271.79100363.08900-0.417802.290301.54220K562SYNCRIP
RP11-1407O15.2ENSG00000174093.6565.72330733.00460-0.373702.375701.71790K562TARDBP
RP11-1407O15.2ENSG00000174093.6498.49090707.05730-0.504304.455703.37920K562TIA1
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for RP11-1407O15.2 is not available on ENCORE database.





8 RBPs can affect the splicing of RP11-1407O15.2 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SERP11-1407O15.2ENSG00000174093.6chr17-3636740636367522363650543636517636375099363751230.170000.002630.02753includedK562AQR
SERP11-1407O15.2ENSG00000174093.6chr17-363581243635815836357157363572723635829836358395-0.088000.006670.05888excludedK562AQR
SERP11-1407O15.2ENSG00000174093.6chr17-363674063636752236365054363651763637509936375123-0.121000.002570.05546excludedK562RBM15
A3SSRP11-1407O15.2ENSG00000174093.6chr17-3636505436365202363650543636517636375099363751770.113000.008610.04652longerK562AQR
A5SSRP11-1407O15.2ENSG00000174093.6chr17-3635879636359042363588413635904236358298363583950.176000.000420.00894longerK562AQR
A5SSRP11-1407O15.2ENSG00000174093.6chr17-3635879636359042363588413635904236358298363583950.162000.000050.00969longerHepG2RBM22
RIRP11-1407O15.2ENSG00000174093.6chr17-3636169636365176363616963636180436365054363651760.475000.000630.01760includedHepG2SRSF1
RIRP11-1407O15.2ENSG00000174093.6chr17-3636169636365176363616963636180436365054363651760.331000.003010.02898includedHepG2TAF15
RIRP11-1407O15.2ENSG00000174093.6chr17-3636169636365176363616963636180436365054363651760.321000.001440.02673includedHepG2G3BP1
RIRP11-1407O15.2ENSG00000174093.6chr17-3636169636365176363616963636180436365054363651760.291000.006490.08291includedHepG2FUBP3
RIRP11-1407O15.2ENSG00000174093.6chr17-3636169636365176363616963636180436365054363651760.285000.006450.05999includedHepG2HNRNPK
MXERP11-1407O15.2ENSG00000174093.6chr17-36361696363618043636505436365176363588413635904236375099363751770.173000.003050.071291includedK562RBM15
MXERP11-1407O15.2ENSG00000174093.6chr17-36361696363618043636511036365202363587963635904236375099363751770.077000.003260.025151includedK562AQR
MXERP11-1407O15.2ENSG00000174093.6chr17-36358124363581583635829836358395363571573635727236358796363590420.133000.002070.017151includedK562AQR

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for RP11-1407O15.2 is not avaliable on ENCORE database.