RNF14

General Information

Gene Name       : RNF14
Gene ID             : ENSG00000013561.17
Essential Gene : No

Functions

Localization

Domains (AlphaFold: RNF14)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878RNF14ENSG00000013561.1722.3919.4520.92ENCSR000AEF
HepG2RNF14ENSG00000013561.1710.8617.3814.12ENCSR985KAT
K562RNF14ENSG00000013561.1768.4261.6465.03ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  
  GeneName    Cell_Line    Method    Exp_ID    Control_ID    Sample_reps    Control_reps    KD%    Status    Project    Note  
RNF14Ribo-STAMP-293TshRNABGRSLV10-27,BGRSLV10-28BGRSLV10-1,BGRSLV10-2NotSatisfiedENCORE2
RNF14Ribo-STAMP-293TshRNABGRSLV10-29,BGRSLV10-30BGRSLV10-1,BGRSLV10-2NotSatisfiedENCORE2
RNF14Ribo-STAMP-293TshRNABGRSDLV03-33,BGRSDLV03-34BGRSDLV03-1,BGRSDLV03-2SubmittedENCORE2
RNF14Ribo-STAMP-293TshRNARNF14-BGRSDLV03-35dox,RNF14-BGRSDLV03-36doxRNF14-BGRSDLV03-33,RNF14-BGRSDLV03-34,SubmittedENCORE2


  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for RNF14 is not avaliable on ENCORE database.



Proteins bound to RNA
  • RNF14 RNA is bound by 7 proteins.  







eCLIP assay for RNF14 is not avaliable on ENCORE database.





7 proteins are bound to RNF14 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr5141362971141363130+3'-UTR,CDS,intron-Proximal3.374765.02533K562GRWD1
chr5141367864141367929+3'-UTR4.258464.86695K562IGF2BP1
chr5141350295141350371+3'-UTR,5'-UTR,intron-Distal3.185053.68137K562DDX3X
chr5141367304141367488+3'-UTR,CDS3.364594.58459K562GRWD1
chr5141353148141353281+3'-UTR,5'-UTR,CDS3.056363.69997K562GRWD1
chr5141350266141350286+3'-UTR,5'-UTR,intron-Distal,intron-Proximal4.281664.66602K562DDX3X
chr5141357867141357951+5'-UTR,CDS,intron-Distal,intron-Proximal3.733336.76362K562YBX3
chr5141348702141348735+5'-UTR,intron-Distal,intron-Proximal4.424635.07098K562DDX3X
chr5141348732141348836+5'-UTR,intron-Distal,intron-Proximal5.012856.22530K562AQR
chr5141351233141351260+intron-Distal3.365863.26015K562PTBP1
chr5141358562141358655+intron-Distal4.110984.54401K562KHSRP
chr5141351219141351233+intron-Distal3.874823.30744K562PTBP1
chr5141359485141359648+intron-Distal,intron-Proximal3.751803.42844K562KHSRP
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for RNF14 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for RNF14 is not available on ENCORE database.

  • 70 RBPs can affect the levels of RNF14.  








The Knockdown/knockout RNA-Seq assay for RNF14 is not available on ENCORE database.





70 RBPs can affect the gene expression of RNF14 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
RNF14ENSG00000013561.13450.08290294.011900.614205.907005.08390HepG2ACO1
RNF14ENSG00000013561.13898.47230436.365101.0418010.841309.85580HepG2AKAP1
RNF14ENSG00000013561.13404.10570295.339000.452303.166602.35250HepG2AKAP8L
RNF14ENSG00000013561.13681.31250428.689900.668308.229107.14960HepG2AUH
RNF14ENSG00000013561.13220.86160404.10650-0.871605.482504.08700HepG2CCAR1
RNF14ENSG00000013561.13543.19510343.031000.663004.891503.87830HepG2CIRBP
RNF14ENSG00000013561.13561.80730348.300000.689607.203606.25840HepG2CELF1
RNF14ENSG00000013561.13393.40880225.654700.801806.000005.04480HepG2DDX21
RNF14ENSG00000013561.13749.46450418.016500.842207.973906.96160HepG2DDX3X
RNF14ENSG00000013561.13501.11900291.722100.780505.211604.19050HepG2DDX55
RNF14ENSG00000013561.13370.21890281.272800.396302.266901.64370HepG2DKC1
RNF14ENSG00000013561.13350.50700263.394600.412102.346301.69220HepG2DNAJC21
RNF14ENSG00000013561.13685.08840381.497400.844507.431906.38400HepG2EIF4A3
RNF14ENSG00000013561.13629.56770369.486300.768709.271107.91080HepG2EIF4G1
RNF14ENSG00000013561.13720.17210492.200300.549006.056505.22540HepG2ETF1
RNF14ENSG00000013561.13469.65060293.927200.676003.953403.04640HepG2FIP1L1
RNF14ENSG00000013561.13458.12050264.693900.791303.937002.26240HepG2HLTF
RNF14ENSG00000013561.13185.64330259.02960-0.480601.836601.31370HepG2HNRNPLL
RNF14ENSG00000013561.13225.23100293.82100-0.383502.010201.48350HepG2HNRNPU
RNF14ENSG00000013561.13587.47850362.939900.694705.403204.48770HepG2IGF2BP2
RNF14ENSG00000013561.13233.16690300.12990-0.364202.063501.41950HepG2ILF2
RNF14ENSG00000013561.13615.76800385.009000.677405.119104.23490HepG2MAGOH
RNF14ENSG00000013561.13499.92700237.911501.0712011.5607010.02510HepG2MSI2
RNF14ENSG00000013561.13336.97640225.063600.582202.962702.12900HepG2PRPF8
RNF14ENSG00000013561.13462.09340346.692300.414402.855902.30170HepG2PTBP1
RNF14ENSG00000013561.13510.10360354.552300.524703.400402.74860HepG2PUF60
RNF14ENSG00000013561.13482.66500376.343800.358902.407001.84640HepG2PUM1
RNF14ENSG00000013561.13732.97950376.087000.9626013.1356011.73990HepG2PUM2
RNF14ENSG00000013561.13489.58520299.460600.709107.950306.99630HepG2PUS1
RNF14ENSG00000013561.13569.55020252.119601.175607.975506.81650HepG2RAVER1
RNF14ENSG00000013561.13710.68660411.386900.7886010.480509.61510HepG2RBM22
RNF14ENSG00000013561.13499.03300340.778200.550203.974203.17710HepG2RBM25
RNF14ENSG00000013561.13765.99880383.485500.9981012.3146011.05490HepG2RPLP0
RNF14ENSG00000013561.13356.06570247.717200.523302.152001.31780HepG2RPS10
RNF14ENSG00000013561.13250.83470154.562200.698403.745703.04110HepG2RPS19
RNF14ENSG00000013561.13493.69690273.665200.851107.005905.77030HepG2RPS2
RNF14ENSG00000013561.13373.79440222.636800.747504.347603.38600HepG2RRP9
RNF14ENSG00000013561.13131.64950281.97110-1.098802.871301.48740HepG2SF1
RNF14ENSG00000013561.13553.65200300.068900.883606.927805.82750HepG2SF3A3
RNF14ENSG00000013561.13445.57160256.399500.797206.403605.36730HepG2SF3B1
RNF14ENSG00000013561.13854.25670464.643800.8784016.2993015.34900HepG2SRFBP1
RNF14ENSG00000013561.13788.28090376.764501.0649019.3135018.30220HepG2SRSF1
RNF14ENSG00000013561.13586.46260403.416400.539705.520604.84490HepG2SSB
RNF14ENSG00000013561.13550.44100398.114800.467303.762103.05660HepG2SUCLG1
RNF14ENSG00000013561.13499.06640290.411700.781005.273004.38740HepG2SUPV3L1
RNF14ENSG00000013561.13162.08230252.42100-0.639102.992302.24190HepG2TARDBP
RNF14ENSG00000013561.13389.70490285.533600.448602.736402.23810HepG2TIAL1
RNF14ENSG00000013561.13165.98190288.05220-0.795306.328805.53850HepG2TRIM56
RNF14ENSG00000013561.13496.40840251.450500.981208.538807.43260HepG2U2AF1
RNF14ENSG00000013561.13295.00560171.559800.781904.934403.91500HepG2UCHL5
RNF14ENSG00000013561.13583.67510292.675900.9958016.9983015.92940HepG2ZNF622
RNF14ENSG00000013561.132403.080901974.493300.283302.248301.65650K562AKAP8L
RNF14ENSG00000013561.131979.353302902.25560-0.552107.159006.28520K562AQR
RNF14ENSG00000013561.13398.85250755.17550-0.921008.461106.33490K562CCAR1
RNF14ENSG00000013561.131671.749502267.78430-0.439905.888304.13440K562CCDC124
RNF14ENSG00000013561.131108.251701345.44110-0.279802.313101.36380K562CSTF2
RNF14ENSG00000013561.135161.179804164.987400.309304.152202.94890K562CELF1
RNF14ENSG00000013561.132670.146402292.317100.220002.659202.01840K562DDX47
RNF14ENSG00000013561.13634.35260845.35740-0.414302.941401.56740K562DHX30
RNF14ENSG00000013561.131450.985702058.69330-0.504708.985407.80210K562EIF2S2
RNF14ENSG00000013561.131730.043801333.597000.375403.366002.46350K562EIF4A3
RNF14ENSG00000013561.132104.499101514.266900.474803.242702.46810K562G3BP2
RNF14ENSG00000013561.13947.965201178.64350-0.314202.321101.59320K562GPKOW
RNF14ENSG00000013561.13677.986101305.69370-0.9455016.4364015.06200K562HNRNPC
RNF14ENSG00000013561.131587.917602147.14430-0.435306.485505.10900K562HNRNPU
RNF14ENSG00000013561.132844.289202198.956800.371103.592202.68950K562HSPD1
RNF14ENSG00000013561.131426.079201702.26840-0.255403.075902.22590K562MTPAP
RNF14ENSG00000013561.132240.148901645.413700.445002.430801.61570K562NAA15
RNF14ENSG00000013561.131186.635901643.49100-0.469903.934202.94250K562PCBP3
RNF14ENSG00000013561.13970.459001260.64460-0.377403.578602.66160K562POLR2G
RNF14ENSG00000013561.13854.194601170.70240-0.454704.109602.97720K562PSIP1
RNF14ENSG00000013561.132941.013901958.319200.586607.542606.69240K562PUS1
RNF14ENSG00000013561.132365.785901907.951500.310203.552602.89430K562RBM15
RNF14ENSG00000013561.131329.340501707.01450-0.360803.109902.21430K562RBM22
RNF14ENSG00000013561.13793.991901068.16820-0.427904.083902.87620K562RCC2
RNF14ENSG00000013561.13741.531701012.58930-0.449503.757002.50880K562SRFBP1
RNF14ENSG00000013561.132360.588501745.075000.435805.576604.57940K562SRSF1
RNF14ENSG00000013561.13859.853101181.05800-0.457904.401503.02390K562SRSF4
RNF14ENSG00000013561.13862.487901766.17670-1.0341018.3441016.21300K562TARDBP
RNF14ENSG00000013561.13887.176601196.30380-0.431303.751202.61930K562TRIM56
RNF14ENSG00000013561.131433.050202005.49060-0.484909.760808.51360K562UPF1
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for RNF14 is not available on ENCORE database.





10 RBPs can affect the splicing of RNF14 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SERNF14ENSG00000013561.13chr5+1413543681413545201413531471413533071413578671413581180.123000.000160.00459includedK562SRSF1
SERNF14ENSG00000013561.13chr5+1413502681413504421413487001413487321413531471413533070.101000.000500.09067includedK562WDR3
SERNF14ENSG00000013561.13chr5+141354368141354520141353147141353307141357867141358118-0.391000.000020.00044excludedHepG2U2AF2
SERNF14ENSG00000013561.13chr5+141350268141350349141348705141348732141353147141353300-0.322000.006190.07314excludedK562PUS1
SERNF14ENSG00000013561.13chr5+141354368141354520141353147141353307141357867141358118-0.366000.000000.00000excludedK562U2AF1
SERNF14ENSG00000013561.13chr5+141350268141350442141348700141348732141353147141353307-0.087000.001940.03862excludedK562U2AF1
SERNF14ENSG00000013561.13chr5+1413543681413545201413531471413533071413578671413581180.127000.000050.01325includedK562SRSF7
SERNF14ENSG00000013561.13chr5+141354368141354520141353147141353307141357867141358118-0.309000.000000.00000excludedK562U2AF2
SERNF14ENSG00000013561.13chr5+141354368141354520141353147141353307141357867141358118-0.203000.000040.00313excludedK562TARDBP
MXERNF14ENSG00000013561.13chr5+1413543681413545201413578671413583951413531471413533071413596871413599160.285000.000360.010321includedHepG2SRSF1
MXERNF14ENSG00000013561.13chr5+141354368141354520141357867141358395141353147141353307141359687141359916-0.147000.000540.012152includedK562U2AF1
MXERNF14ENSG00000013561.13chr5+141354368141354520141357867141358395141353147141353307141359687141359916-0.164000.000070.001852includedK562U2AF2
MXERNF14ENSG00000013561.13chr5+1413578671413583951413596871413599161413531471413533071413629441413631170.135000.005320.090531includedK562TARDBP
MXERNF14ENSG00000013561.13chr5+141354368141354520141357867141358395141353147141353307141362944141363117-0.212000.000960.026222includedK562TARDBP
MXERNF14ENSG00000013561.13chr5+141354368141354520141357867141358395141353147141353307141359687141359916-0.357000.000010.000192includedHepG2U2AF2
MXERNF14ENSG00000013561.13chr5+1413543681413545201413578671413583951413531471413533071413596871413599160.252000.000080.009931includedHepG2DROSHA
MXERNF14ENSG00000013561.13chr5+1413543681413545201413578671413583951413531471413533071413596871413599160.154000.000450.023161includedK562TAF15
MXERNF14ENSG00000013561.13chr5+141354368141354520141357867141358395141353147141353307141359687141359916-0.129000.001080.087232includedK562FMR1

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for RNF14 is not avaliable on ENCORE database.