PTGER3

General Information

Gene Name       : PTGER3
Gene ID             : ENSG00000050628.20
Essential Gene : No

Functions

Localization

Domains (AlphaFold: PTGER3)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878PTGER3ENSG00000050628.200.000.000.00ENCSR000AEF
HepG2PTGER3ENSG00000050628.200.000.000.00ENCSR985KAT
K562PTGER3ENSG00000050628.208.369.829.09ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for PTGER3 is not avaliable on ENCORE database.



Proteins bound to RNA
  • PTGER3 RNA is bound by 4 proteins.  







eCLIP assay for PTGER3 is not avaliable on ENCORE database.





4 proteins are bound to PTGER3 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr17151251371512578-CDS,intron-Distal5.1583117.32805K562RBM15
chr17151236071512426-CDS,intron-Distal4.056766.98960K562RBM15
chr17151276671512836-CDS,intron-Distal4.9524114.54210K562RBM15
chr17151262771512740-CDS,intron-Distal4.9110118.68443K562RBM15
chr17147795171478035-CDS,intron-Distal,intron-Proximal4.195703.73331K562RBM15
chr17151245771512513-CDS,intron-Distal4.454838.03807K562RBM15
chr17150700471507082-intron-Distal5.2996110.50400K562LIN28B
chr17150571071505776-intron-Distal4.8560816.59938K562PTBP1
chr17146960071469624-intron-Distal4.360933.59917K562EXOSC5
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for PTGER3 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for PTGER3 is not available on ENCORE database.

  • 78 RBPs can affect the levels of PTGER3.  








The Knockdown/knockout RNA-Seq assay for PTGER3 is not available on ENCORE database.





78 RBPs can affect the gene expression of PTGER3 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
PTGER3ENSG00000050628.16959.475101330.63570-0.471803.562602.15630K562ABCF1
PTGER3ENSG00000050628.161627.195501320.206800.301503.939003.28400K562AGGF1
PTGER3ENSG00000050628.162223.598201373.755100.6947011.146809.71720K562AKAP8L
PTGER3ENSG00000050628.161439.452901771.86040-0.299703.027701.72710K562APOBEC3C
PTGER3ENSG00000050628.161041.697501657.19390-0.669808.184307.26300K562AQR
PTGER3ENSG00000050628.161893.405901441.437800.393405.600104.24740K562ATP5C1
PTGER3ENSG00000050628.16709.60710905.98160-0.352503.627502.52170K562BCLAF1
PTGER3ENSG00000050628.16295.08980397.47570-0.429702.452901.47030K562CCAR1
PTGER3ENSG00000050628.16577.10260814.33700-0.496804.601303.59190K562CPSF6
PTGER3ENSG00000050628.16615.93120794.33870-0.367003.595302.06410K562DDX27
PTGER3ENSG00000050628.161325.068701589.89770-0.262902.845002.18420K562DDX47
PTGER3ENSG00000050628.162488.683401478.132900.7515020.2131017.45900K562DKC1
PTGER3ENSG00000050628.16306.76100427.43600-0.478602.868301.49760K562DNAJC21
PTGER3ENSG00000050628.161147.525301383.14190-0.269402.438101.31600K562EIF2S1
PTGER3ENSG00000050628.16701.23220970.55450-0.468902.853402.12500K562EIF2S2
PTGER3ENSG00000050628.16519.23610946.80690-0.8667014.9999013.09370K562EIF3G
PTGER3ENSG00000050628.16857.661101315.49980-0.617107.288505.96100K562EIF4A3
PTGER3ENSG00000050628.161595.437102008.08220-0.331904.162103.01620K562EIF4G2
PTGER3ENSG00000050628.16634.60530956.43840-0.591805.872304.60560K562FIP1L1
PTGER3ENSG00000050628.16466.51980702.27570-0.590104.498703.30700K562FTO
PTGER3ENSG00000050628.16888.159001368.07240-0.623308.503507.51370K562FXR1
PTGER3ENSG00000050628.16829.493501011.38980-0.286002.381901.33190K562GLRX3
PTGER3ENSG00000050628.16541.35530777.49500-0.522304.493403.48610K562GPKOW
PTGER3ENSG00000050628.16862.130801293.53490-0.585303.042402.25150K562GRSF1
PTGER3ENSG00000050628.161613.883101087.333700.569606.153104.58740K562HNRNPA1
PTGER3ENSG00000050628.163054.645401390.753001.135007.879205.42600K562HNRNPA2B1
PTGER3ENSG00000050628.16285.75860823.42990-1.5268028.7402026.90110K562HNRNPC
PTGER3ENSG00000050628.16472.77880735.30890-0.637206.272304.46580K562HNRNPF
PTGER3ENSG00000050628.161068.239201436.89900-0.427704.358902.99740K562HNRNPL
PTGER3ENSG00000050628.16313.18880786.64710-1.3287017.5351014.77700K562HNRNPM
PTGER3ENSG00000050628.16724.060501296.77960-0.8408012.0455010.41480K562HSPD1
PTGER3ENSG00000050628.16521.81100835.11330-0.678406.268103.93020K562LIN28B
PTGER3ENSG00000050628.162469.479801633.144400.596509.679307.78040K562MBNL1
PTGER3ENSG00000050628.16399.57260758.92040-0.9255011.9630010.06450K562METAP2
PTGER3ENSG00000050628.16564.383501063.34440-0.9139020.2954018.39780K562MTPAP
PTGER3ENSG00000050628.161822.136701144.722100.670502.298301.51190K562NAA15
PTGER3ENSG00000050628.16973.091501181.47190-0.279903.343902.53000K562NSUN2
PTGER3ENSG00000050628.16549.21410810.72230-0.561803.113401.57640K562NUSAP1
PTGER3ENSG00000050628.16893.890401431.45160-0.679304.532802.92090K562PABPC1
PTGER3ENSG00000050628.162470.767201216.397501.022206.509204.79710K562PABPN1
PTGER3ENSG00000050628.161974.196401474.554500.420903.265601.79210K562PCBP1
PTGER3ENSG00000050628.16538.23480769.69860-0.516103.641702.68550K562PCBP3
PTGER3ENSG00000050628.16476.65840803.91170-0.754108.671506.10790K562PHF6
PTGER3ENSG00000050628.16406.20860590.38980-0.539404.500903.47630K562POLR2G
PTGER3ENSG00000050628.16764.194001085.69330-0.506604.740303.62540K562PPIG
PTGER3ENSG00000050628.161478.06220799.381100.886703.514201.39500K562PRPF6
PTGER3ENSG00000050628.16488.23430752.95950-0.625005.106804.08910K562PRPF8
PTGER3ENSG00000050628.16869.331101465.88100-0.753807.413706.36310K562PTBP1
PTGER3ENSG00000050628.161445.915502190.93930-0.599607.973006.58050K562PUF60
PTGER3ENSG00000050628.161733.275902330.62000-0.427206.390804.71270K562PUM1
PTGER3ENSG00000050628.161814.594902283.32950-0.331504.485603.25600K562PUM2
PTGER3ENSG00000050628.161870.760901362.244500.457504.455303.78910K562PUS1
PTGER3ENSG00000050628.162198.463601327.421100.7278016.5721015.10790K562RBM15
PTGER3ENSG00000050628.16945.033401405.99100-0.573204.381603.29170K562RBM22
PTGER3ENSG00000050628.161040.486101370.27740-0.397203.050701.56870K562RBM34
PTGER3ENSG00000050628.16485.32940673.57100-0.472903.691502.54740K562RCC2
PTGER3ENSG00000050628.161040.673001479.49030-0.507603.935702.60390K562NELFE
PTGER3ENSG00000050628.161048.829301392.41340-0.408803.654201.68000K562RECQL
PTGER3ENSG00000050628.16544.308601266.62060-1.2185010.138408.09590K562RPS3
PTGER3ENSG00000050628.162553.762701112.358801.198906.929204.73930K562SF1
PTGER3ENSG00000050628.16863.521601165.81000-0.433005.417804.30550K562SF3A3
PTGER3ENSG00000050628.162081.323901277.581500.704003.074401.75370K562SNRNP200
PTGER3ENSG00000050628.16412.66650638.52940-0.629805.245203.70200K562SRFBP1
PTGER3ENSG00000050628.161561.128901194.397400.386202.310801.44670K562SRPK2
PTGER3ENSG00000050628.161162.636201436.97280-0.305602.253201.60720K562SRSF1
PTGER3ENSG00000050628.16771.287401223.01280-0.665103.096701.96770K562SRSF4
PTGER3ENSG00000050628.16892.35170728.404700.292802.433801.33900K562SRSF7
PTGER3ENSG00000050628.161659.262501254.962600.402803.373701.85030K562SSRP1
PTGER3ENSG00000050628.161561.903901911.60130-0.291503.024201.44800K562SUCLG1
PTGER3ENSG00000050628.16971.890901454.48120-0.581605.125804.14810K562TARDBP
PTGER3ENSG00000050628.161074.234001402.96640-0.385202.678301.87470K562TIA1
PTGER3ENSG00000050628.16911.642001194.08120-0.389404.660403.00880K562TROVE2
PTGER3ENSG00000050628.16513.90940771.62810-0.586404.702203.33570K562UCHL5
PTGER3ENSG00000050628.16910.431301252.73970-0.460506.883205.80740K562UPF1
PTGER3ENSG00000050628.161532.285501154.156900.408704.260902.16590K562UPF2
PTGER3ENSG00000050628.16872.371801071.92990-0.297202.252001.46370K562WDR3
PTGER3ENSG00000050628.16829.208701114.68190-0.426806.153804.94470K562WDR43
PTGER3ENSG00000050628.16568.67040785.67330-0.466303.238701.89560K562XRN2
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for PTGER3 is not available on ENCORE database.





1 RBPs can affect the splicing of PTGER3 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SEPTGER3ENSG00000050628.16chr1-714194457141947271318035713185427147798771478167-0.527000.000240.05463excludedK562SBDS
MXEPTGER3ENSG00000050628.16chr1-71419445714194727143997971440071713180357131854271477987714781670.233000.004940.086571includedK562SBDS

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for PTGER3 is not avaliable on ENCORE database.