PLA2G12A

General Information

Gene Name       : PLA2G12A
Gene ID             : ENSG00000123739.10
Essential Gene : No

Functions

Localization

Domains (AlphaFold: PLA2G12A)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878PLA2G12AENSG00000123739.105.388.386.88ENCSR000AEF
HepG2PLA2G12AENSG00000123739.1037.0948.4242.76ENCSR985KAT
K562PLA2G12AENSG00000123739.1056.2554.1555.20ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for PLA2G12A is not avaliable on ENCORE database.



Proteins bound to RNA
  • PLA2G12A RNA is bound by 14 proteins.  







eCLIP assay for PLA2G12A is not avaliable on ENCORE database.





14 proteins are bound to PLA2G12A RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr4110638702110638765-3'-UTR,CDS,intron-Distal,intron-Proximal4.7808312.61869K562PUM2
chr4110635480110635543-3'-UTR,CDS,intron-Distal3.428104.89070K562UCHL5
chr4110638666110638712-3'-UTR,CDS,intron-Distal,intron-Proximal5.080596.15361K562PRPF8
chr4110638624110638709-3'-UTR,CDS,intron-Distal,intron-Proximal3.896915.90528HepG2AQR
chr4110638656110638719-3'-UTR,CDS,intron-Distal,intron-Proximal4.9850420.81882HepG2PRPF8
chr4110632414110632475-3'-UTR,intron-Distal3.802663.66308K562UPF1
chr4110632411110632468-3'-UTR,intron-Distal3.919097.87287K562FAM120A
chr4110631888110631932-3'-UTR,intron-Distal3.109804.42116K562FAM120A
chr4110638801110638863-3'-UTR,CDS,intron-Distal4.034624.21087HepG2GRWD1
chr4110638707110638801-3'-UTR,CDS,intron-Distal4.229929.83058HepG2GRWD1
chr4110632628110632708-3'-UTR,intron-Distal3.560668.32448K562FAM120A
chr4110632627110632711-3'-UTR,intron-Distal4.771925.66624K562LIN28B
chr4110635341110635398-3'-UTR,intron-Distal,intron-Proximal3.121203.86052K562YBX3
chr4110650964110651028-5'-UTR,CDS,intron-Distal3.156817.91814HepG2DDX3X
chr4110651143110651184-5'-UTR,intron-Distal,intron-Proximal4.801434.03170HepG2DDX3X
chr4110651143110651212-5'-UTR,intron-Distal,intron-Proximal3.864373.05875K562RBM15
chr4110651147110651223-5'-UTR,intron-Distal,intron-Proximal4.368344.68979HepG2UPF1
chr4110651110110651205-5'-UTR,intron-Distal,intron-Proximal5.0426715.56064K562DDX3X
chr4110650952110651118-5'-UTR,CDS,intron-Distal,intron-Proximal3.292684.52619HepG2SRSF1
chr4110651015110651159-5'-UTR,intron-Distal,intron-Proximal3.148915.65410K562FTO
chr4110650856110650912-CDS,intron-Distal5.216465.29846HepG2DDX3X
chr4110644855110644957-intron-Distal3.926123.06194K562ILF3
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for PLA2G12A is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for PLA2G12A is not available on ENCORE database.

  • 88 RBPs can affect the levels of PLA2G12A.  








The Knockdown/knockout RNA-Seq assay for PLA2G12A is not available on ENCORE database.





88 RBPs can affect the gene expression of PLA2G12A :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
PLA2G12AENSG00000123739.6399.35130235.056500.764603.533302.52130HepG2BCLAF1
PLA2G12AENSG00000123739.6481.48840315.759100.608604.303103.57520HepG2BOP1
PLA2G12AENSG00000123739.6271.22510167.082100.698803.692902.46570HepG2CSTF2
PLA2G12AENSG00000123739.6429.84230248.865800.788304.201902.65540HepG2DDX27
PLA2G12AENSG00000123739.6310.86110201.474400.625602.938001.50430HepG2DDX28
PLA2G12AENSG00000123739.6631.19870480.450500.393602.056801.50860HepG2DDX3X
PLA2G12AENSG00000123739.6472.15230310.946300.602504.159702.92670HepG2DDX5
PLA2G12AENSG00000123739.6381.05140262.064200.540003.323402.25350HepG2DHX30
PLA2G12AENSG00000123739.6422.24020323.400500.384602.385601.74930HepG2DKC1
PLA2G12AENSG00000123739.6655.89130465.576300.494303.541402.62920HepG2EIF4G2
PLA2G12AENSG00000123739.6359.55610252.361400.510602.745601.96300HepG2FUBP3
PLA2G12AENSG00000123739.6305.13510442.54830-0.536402.247301.62130HepG2FXR1
PLA2G12AENSG00000123739.6410.17990305.124200.426802.142201.52280HepG2HNRNPC
PLA2G12AENSG00000123739.6226.21660303.10640-0.422102.447201.87500HepG2HNRNPU
PLA2G12AENSG00000123739.6286.69760417.11360-0.540903.076602.36930HepG2IGF2BP2
PLA2G12AENSG00000123739.6296.97440442.70390-0.576003.243402.53390HepG2MAGOH
PLA2G12AENSG00000123739.6226.13320445.14120-0.977106.899305.93460HepG2MATR3
PLA2G12AENSG00000123739.6277.65640405.58490-0.546702.864802.13110HepG2PABPC4
PLA2G12AENSG00000123739.6217.62750300.01470-0.463202.595401.77140HepG2PARN
PLA2G12AENSG00000123739.6275.12600401.29240-0.544603.852403.16100HepG2PCBP1
PLA2G12AENSG00000123739.6509.34090408.339800.318801.882901.41450HepG2PTBP1
PLA2G12AENSG00000123739.6588.14990466.319600.334801.925901.41580HepG2PUF60
PLA2G12AENSG00000123739.6408.98600495.01670-0.275401.864701.35720HepG2PUM1
PLA2G12AENSG00000123739.6340.66130494.65640-0.538104.076503.26820HepG2PUM2
PLA2G12AENSG00000123739.6443.14970344.298700.364002.486301.89430HepG2PUS1
PLA2G12AENSG00000123739.6652.51530442.221300.561104.802004.01260HepG2QKI
PLA2G12AENSG00000123739.6224.72850518.12420-1.2051016.3245015.27760HepG2RBM22
PLA2G12AENSG00000123739.6562.55720425.116900.404003.067202.44850HepG2SF3B4
PLA2G12AENSG00000123739.6799.87950585.200600.450804.945204.32970HepG2SRFBP1
PLA2G12AENSG00000123739.6300.17460460.42020-0.617105.590504.74640HepG2SRSF5
PLA2G12AENSG00000123739.6679.88100361.010000.9131015.5678014.44890HepG2SRSF9
PLA2G12AENSG00000123739.6772.37190508.089900.604108.251507.45770HepG2SSB
PLA2G12AENSG00000123739.6518.57210398.868100.378502.487801.95260HepG2TAF15
PLA2G12AENSG00000123739.6490.34820366.484400.420002.041801.32060HepG2TIA1
PLA2G12AENSG00000123739.61853.796002654.89210-0.518205.871805.09360K562AGGF1
PLA2G12AENSG00000123739.62310.095102917.00740-0.336502.902201.88910K562AKAP8
PLA2G12AENSG00000123739.61811.731402762.45740-0.608606.903905.83320K562AKAP8L
PLA2G12AENSG00000123739.61126.625302863.65040-1.3458034.6901032.81810K562AQR
PLA2G12AENSG00000123739.61224.460901553.28530-0.343202.085601.33390K562BOP1
PLA2G12AENSG00000123739.61690.720702326.27470-0.460403.760402.03540K562CKAP4
PLA2G12AENSG00000123739.62212.597002609.61070-0.238102.592701.52230K562CPEB4
PLA2G12AENSG00000123739.6909.899901651.63140-0.8601011.131709.54290K562CPSF6
PLA2G12AENSG00000123739.62198.304602700.45970-0.296804.414403.61710K562DDX47
PLA2G12AENSG00000123739.61060.310501476.28770-0.477503.809201.81730K562DDX51
PLA2G12AENSG00000123739.6685.241801367.06640-0.9964015.2280012.91700K562EFTUD2
PLA2G12AENSG00000123739.61197.266001983.35410-0.7282011.8115010.47830K562EIF2S2
PLA2G12AENSG00000123739.6963.995701398.11040-0.536406.060504.85500K562EIF4A3
PLA2G12AENSG00000123739.61036.418401259.01420-0.280702.630301.51650K562EIF4B
PLA2G12AENSG00000123739.6978.145501220.36810-0.319203.140401.74940K562EWSR1
PLA2G12AENSG00000123739.61123.996901680.41160-0.580206.579205.23810K562FMR1
PLA2G12AENSG00000123739.61002.853101424.26390-0.506104.386503.21100K562FTO
PLA2G12AENSG00000123739.61835.020001453.965200.335704.085003.37100K562FXR1
PLA2G12AENSG00000123739.61782.822901358.511300.392002.385301.73560K562G3BP2
PLA2G12AENSG00000123739.61502.347601838.77340-0.291503.128501.91230K562GLRX3
PLA2G12AENSG00000123739.61157.347501576.93630-0.446304.478003.47320K562GPKOW
PLA2G12AENSG00000123739.61730.143502643.23390-0.611407.658606.38730K562GRSF1
PLA2G12AENSG00000123739.61436.736202270.31440-0.660103.034301.73900K562HNRNPA2B1
PLA2G12AENSG00000123739.6982.052301624.51440-0.7261011.3104010.17160K562HNRNPC
PLA2G12AENSG00000123739.6961.348801450.67470-0.593607.405005.46790K562HNRNPF
PLA2G12AENSG00000123739.61385.440702122.83890-0.6156011.812909.99220K562HNRNPU
PLA2G12AENSG00000123739.61432.043001877.82510-0.391002.602501.61830K562IGF2BP2
PLA2G12AENSG00000123739.61468.245801910.20320-0.379603.571402.17660K562IGF2BP3
PLA2G12AENSG00000123739.62162.444802931.93170-0.439203.666702.69920K562KIF1C
PLA2G12AENSG00000123739.6913.409201346.41580-0.559803.966102.83210K562KRR1
PLA2G12AENSG00000123739.62278.231602806.35790-0.300802.505201.49890K562MAK16
PLA2G12AENSG00000123739.61494.322901970.08800-0.398804.430803.23730K562MATR3
PLA2G12AENSG00000123739.62430.800603284.46580-0.434203.788402.69520K562MBNL1
PLA2G12AENSG00000123739.61124.443101539.25110-0.453004.430903.30350K562METAP2
PLA2G12AENSG00000123739.61467.114101933.23070-0.398006.642405.43860K562MTPAP
PLA2G12AENSG00000123739.61642.502702302.14860-0.487103.650902.60520K562NAA15
PLA2G12AENSG00000123739.61091.421001396.18300-0.355303.573902.15810K562NCBP2
PLA2G12AENSG00000123739.61915.551302147.99140-0.165202.072001.41540K562NSUN2
PLA2G12AENSG00000123739.6878.980201437.35610-0.709505.069202.62200K562PABPC4
PLA2G12AENSG00000123739.6899.551701986.55250-1.143007.953005.96810K562PABPN1
PLA2G12AENSG00000123739.61415.572101929.36160-0.446705.567703.58710K562PCBP1
PLA2G12AENSG00000123739.61096.026401756.47710-0.680409.712307.83310K562PCBP2
PLA2G12AENSG00000123739.61754.225002245.81210-0.356402.159101.43880K562PPIG
PLA2G12AENSG00000123739.6815.519401330.30940-0.706007.989106.70800K562PRPF8
PLA2G12AENSG00000123739.61019.465501456.54210-0.514705.304703.99830K562PSIP1
PLA2G12AENSG00000123739.62832.856903501.99250-0.305902.403301.64460K562PUF60
PLA2G12AENSG00000123739.62802.634203649.71160-0.381003.985302.82960K562PUM2
PLA2G12AENSG00000123739.61403.338702740.15900-0.9654013.2250012.08330K562PUS1
PLA2G12AENSG00000123739.61701.490002669.40870-0.649708.243307.24890K562RBM15
PLA2G12AENSG00000123739.61143.861901839.25490-0.685209.647407.92540K562RBM22
PLA2G12AENSG00000123739.6895.794901289.80890-0.525903.179401.74790K562RBM25
PLA2G12AENSG00000123739.6998.794401355.17450-0.440202.809701.98670K562RPS19
PLA2G12AENSG00000123739.61273.099102119.52160-0.7354017.9213015.99420K562SF3A3
PLA2G12AENSG00000123739.6977.190501499.59580-0.617905.688704.26080K562SF3B1
PLA2G12AENSG00000123739.61207.685002086.27270-0.788703.681602.19140K562SNRNP200
PLA2G12AENSG00000123739.6833.807701259.74620-0.595306.646004.85370K562SRFBP1
PLA2G12AENSG00000123739.61536.073901880.07090-0.291502.524701.84440K562SRSF1
PLA2G12AENSG00000123739.61412.674701775.44730-0.329802.652501.62810K562SRSF5
PLA2G12AENSG00000123739.6919.178901288.21410-0.487003.642202.46030K562SUPV3L1
PLA2G12AENSG00000123739.61157.125501902.87450-0.717609.657008.21000K562TARDBP
PLA2G12AENSG00000123739.61418.674301835.50580-0.371603.868902.87930K562TIA1
PLA2G12AENSG00000123739.61038.017901400.95300-0.432603.362702.32620K562TIAL1
PLA2G12AENSG00000123739.61300.622401800.89260-0.469504.825103.30630K562TRA2A
PLA2G12AENSG00000123739.61098.764701488.30340-0.437804.163802.95350K562TRIM56
PLA2G12AENSG00000123739.61032.550101363.32240-0.400902.950201.89190K562UCHL5
PLA2G12AENSG00000123739.61895.968302277.56090-0.264603.556002.74910K562UPF1
PLA2G12AENSG00000123739.61774.078002777.67000-0.646803.530302.01150K562UTP18
PLA2G12AENSG00000123739.61286.693702094.48600-0.702907.906605.95390K562UTP3
PLA2G12AENSG00000123739.62061.146503226.21140-0.6464010.443908.64250K562ZC3H8
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for PLA2G12A is not available on ENCORE database.





8 RBPs can affect the splicing of PLA2G12A :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SEPLA2G12AENSG00000123739.6chr4-1106476471106477611106398441106399151106507571106509030.070000.003000.05047includedK562SRSF1
SEPLA2G12AENSG00000123739.6chr4-1106476471106477611106398441106399151106507571106511300.070000.002770.02868includedK562AQR
SEPLA2G12AENSG00000123739.6chr4-110639838110639915110638703110638869110650757110651233-0.057000.007680.06591excludedK562AQR
SEPLA2G12AENSG00000123739.6chr4-110639838110639915110638703110638869110650757110651233-0.054000.002220.07209excludedK562FXR1
SEPLA2G12AENSG00000123739.6chr4-1106476471106477611106398441106399151106507571106511300.058000.000140.01050includedHepG2SFPQ
SEPLA2G12AENSG00000123739.6chr4-110647647110647761110639844110639915110650757110651130-0.107000.000130.00923excludedHepG2SF3B4
SEPLA2G12AENSG00000123739.6chr4-110639838110639915110638703110638869110650757110651233-0.053000.002140.06679excludedK562TARDBP
SEPLA2G12AENSG00000123739.6chr4-1106476471106477611106398441106399151106507571106511300.052000.003170.09235includedHepG2HNRNPC
SEPLA2G12AENSG00000123739.6chr4-110639838110639915110638703110638869110650757110651233-0.064000.000260.01407excludedK562PTBP1

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for PLA2G12A is not avaliable on ENCORE database.