NAA38

General Information

Gene Name       : NAA38
Gene ID             : ENSG00000183011.13
Essential Gene : No

Functions

Localization

Domains (AlphaFold: NAA38)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878NAA38ENSG00000183011.131.7321.4411.59ENCSR000AEF
HepG2NAA38ENSG00000183011.1352.3712.2532.31ENCSR985KAT
K562NAA38ENSG00000183011.1323.7312.8718.30ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for NAA38 is not avaliable on ENCORE database.



Proteins bound to RNA
  • NAA38 RNA is bound by 20 proteins.  







eCLIP assay for NAA38 is not avaliable on ENCORE database.





20 proteins are bound to NAA38 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr7117832089117832178+3'-UTR3.727765.16259K562LIN28B
chr7117831896117831956+3'-UTR,intron-Proximal3.381267.81851K562KHSRP
chr7117831966117832117+3'-UTR,CDS3.5762912.37882K562CPSF6
chr7117831959117832122+3'-UTR,CDS,intron-Proximal3.025595.15272K562PUM1
chr7117832117117832187+3'-UTR5.4927811.21463K562CPSF6
chr7117832230117832308+3'-UTR4.372774.71107K562CSTF2T
chr7117832085117832141+3'-UTR6.07912400.00000K562PUM2
chr7117832090117832165+3'-UTR3.5308211.02630K562PABPC4
chr7117832096117832182+3'-UTR5.244676.09426HepG2SUB1
chr7117832044117832085+3'-UTR,CDS5.0095776.47283K562PUM2
chr7117832423117832500+3'-UTR3.337573.74491K562CSTF2T
chr7117832141117832191+3'-UTR5.1788644.37574K562PUM2
chr7117831702117831786+3'-UTR,intron-Distal3.113009.07270K562KHSRP
chr7117828475117828656+3'-UTR,intron-Distal,intron-Proximal3.115616.94055K562KHSRP
chr7117824376117824427+5'-UTR,intron-Distal,intron-Proximal4.7203711.32600K562AQR
chr7117824444117824514+5'-UTR,intron-Distal3.245784.18053K562HNRNPM
chr7117824318117824427+5'-UTR,CDS,intron-Distal,intron-Proximal4.260607.76240HepG2PRPF4
chr7117824289117824312+5'-UTR,CDS,intron-Proximal3.7992116.10484K562DDX3X
chr7117824363117824436+5'-UTR,intron-Distal,intron-Proximal4.093027.84941K562EFTUD2
chr7117824212117824303+5'-UTR,CDS3.907795.11373HepG2NCBP2
chr7117824245117824289+5'-UTR,CDS4.0972623.30028K562DDX3X
chr7117825658117825785+5'-UTR,CDS,intron-Proximal4.5903117.69855K562AQR
chr7117824299117824376+5'-UTR,CDS,intron-Proximal4.7724728.46471K562AQR
chr7117824331117824441+5'-UTR,CDS,intron-Distal,intron-Proximal3.376456.78402K562HNRNPM
chr7117824319117824423+5'-UTR,CDS,intron-Distal,intron-Proximal4.899089.50259HepG2EFTUD2
chr7117824530117824579+5'-UTR,intron-Distal3.401394.25110K562CSTF2T
chr7117824326117824430+5'-UTR,CDS,intron-Distal,intron-Proximal3.085956.46110K562GEMIN5
chr7117824196117824245+5'-UTR4.4641612.21906K562DDX3X
chr7117825663117825746+5'-UTR,CDS,intron-Proximal3.323893.42396HepG2U2AF2
chr7117824306117824423+5'-UTR,CDS,intron-Distal,intron-Proximal5.609579.24065HepG2AQR
chr7117824360117824450+5'-UTR,intron-Distal,intron-Proximal3.903433.03048HepG2GTF2F1
chr7117825323117825393+5'-UTR,intron-Distal3.638403.49530K562HNRNPC
chr7117828320117828382+CDS,intron-Proximal3.536014.85520K562U2AF2
chr7117828330117828375+CDS,intron-Proximal3.192645.86433K562UCHL5
chr7117828387117828454+CDS3.496143.80498K562PUM1
chr7117826284117826349+intron-Distal3.205115.42536K562KHSRP
chr7117825757117825825+intron-Proximal4.361538.23899K562PRPF8
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for NAA38 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for NAA38 is not available on ENCORE database.

  • 73 RBPs can affect the levels of NAA38.  








The Knockdown/knockout RNA-Seq assay for NAA38 is not available on ENCORE database.





73 RBPs can affect the gene expression of NAA38 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
NAA38ENSG00000128534.3352.84880546.03690-0.629903.666402.76480HepG2ASCC1
NAA38ENSG00000128534.3591.85000830.08140-0.488006.033505.08190HepG2AUH
NAA38ENSG00000128534.3336.37220522.29210-0.634803.875102.82810HepG2BCLAF1
NAA38ENSG00000128534.3351.40190951.43820-1.4370026.3421024.80810HepG2BOP1
NAA38ENSG00000128534.3656.53760914.24600-0.477702.783401.80520HepG2CCAR1
NAA38ENSG00000128534.3385.55250513.77290-0.414203.527302.79200HepG2CKAP4
NAA38ENSG00000128534.3444.65100873.48300-0.9741012.1884010.86250HepG2CPSF6
NAA38ENSG00000128534.3494.30980655.42560-0.407002.619801.54460HepG2CPSF7
NAA38ENSG00000128534.3614.14000890.94640-0.536806.757705.83770HepG2CELF1
NAA38ENSG00000128534.3466.52790632.18970-0.438401.952501.41830HepG2DDX3X
NAA38ENSG00000128534.3624.09770991.90050-0.668403.545902.44250HepG2DDX59
NAA38ENSG00000128534.3600.29520491.586700.288101.899701.32190HepG2DKC1
NAA38ENSG00000128534.3330.94460522.06490-0.657603.946703.24660HepG2EIF2S1
NAA38ENSG00000128534.3672.58600905.37090-0.428803.280002.39740HepG2EIF4G2
NAA38ENSG00000128534.3709.43310953.07970-0.425904.366303.64120HepG2ETF1
NAA38ENSG00000128534.3277.23950523.25230-0.916409.243707.85180HepG2FUBP3
NAA38ENSG00000128534.3555.93370990.19070-0.832808.413607.34140HepG2GPKOW
NAA38ENSG00000128534.3735.87550880.43890-0.258802.146001.31150HepG2HNRNPA2B1
NAA38ENSG00000128534.3488.23560704.36100-0.528705.912904.91650HepG2HNRNPF
NAA38ENSG00000128534.3733.53200872.71400-0.250602.299601.67670HepG2HNRNPL
NAA38ENSG00000128534.3553.92860944.95450-0.770508.020607.01050HepG2HNRNPLL
NAA38ENSG00000128534.3505.82920693.59440-0.455403.797702.96000HepG2IGF2BP1
NAA38ENSG00000128534.3402.01180548.91010-0.449302.418701.78240HepG2IGF2BP2
NAA38ENSG00000128534.3596.25480949.98490-0.672009.437708.05570HepG2NOL12
NAA38ENSG00000128534.3414.05930621.83880-0.586703.215902.09790HepG2PCBP2
NAA38ENSG00000128534.3558.80970906.82960-0.698508.225707.27100HepG2PUF60
NAA38ENSG00000128534.3782.20600961.93020-0.298402.308801.69440HepG2PUM2
NAA38ENSG00000128534.3466.96570758.77060-0.700307.190406.16540HepG2RPLP0
NAA38ENSG00000128534.3342.63360589.47300-0.782804.900603.66000HepG2RPS10
NAA38ENSG00000128534.3472.20860609.05450-0.367102.105501.40210HepG2RPS2
NAA38ENSG00000128534.3370.73270520.67900-0.490002.414901.66510HepG2RPS3A
NAA38ENSG00000128534.3318.91380451.03850-0.500102.275301.55530HepG2RRP9
NAA38ENSG00000128534.3716.28750935.33540-0.384902.737002.03460HepG2SF3B1
NAA38ENSG00000128534.3616.52510869.47410-0.496006.812405.79100HepG2SLBP
NAA38ENSG00000128534.3633.109401040.71850-0.717104.734103.69950HepG2SNRNP70
NAA38ENSG00000128534.3812.57340594.669500.450304.884904.30210HepG2SRSF1
NAA38ENSG00000128534.3661.29110895.34220-0.437205.110004.30030HepG2SRSF5
NAA38ENSG00000128534.3433.70540692.01170-0.674108.865507.73850HepG2SRSF7
NAA38ENSG00000128534.3346.93160483.80950-0.479804.018503.37700HepG2SRSF9
NAA38ENSG00000128534.3830.018301018.26780-0.294903.119002.46610HepG2SUCLG1
NAA38ENSG00000128534.3404.31350588.29160-0.541102.849302.16340HepG2SUPV3L1
NAA38ENSG00000128534.3728.66500534.558000.446802.837902.27050HepG2TAF15
NAA38ENSG00000128534.3547.09000920.95940-0.751408.248007.08440HepG2TARDBP
NAA38ENSG00000128534.3354.01490630.07490-0.8317010.190809.33620HepG2TIAL1
NAA38ENSG00000128534.3526.16470635.75840-0.273002.048601.54940HepG2TRIM56
NAA38ENSG00000128534.3665.53460885.90690-0.412603.470102.47960HepG2TUFM
NAA38ENSG00000128534.3692.27510937.70070-0.437802.616601.80290HepG2UBE2L3
NAA38ENSG00000128534.3463.78170646.19930-0.478504.907804.02030HepG2UPF1
NAA38ENSG00000128534.3603.07660710.69720-0.236901.858101.38550HepG2ZNF622
NAA38ENSG00000128534.33576.790704266.06560-0.254202.066901.49990K562AKAP8L
NAA38ENSG00000128534.32267.663802818.09200-0.313502.592402.01990K562AQR
NAA38ENSG00000128534.31379.545401678.98320-0.283403.499802.41510K562BCLAF1
NAA38ENSG00000128534.31208.673602116.76020-0.8084011.9396010.08900K562BOP1
NAA38ENSG00000128534.33967.535604899.52040-0.304403.554202.19370K562CCDC124
NAA38ENSG00000128534.32526.808003078.78640-0.285003.808102.50240K562CPEB4
NAA38ENSG00000128534.31684.862902250.79030-0.417804.810703.78110K562CPSF6
NAA38ENSG00000128534.32613.233103185.77830-0.285804.200003.41900K562DDX47
NAA38ENSG00000128534.31005.412301310.85980-0.382702.809701.88940K562EFTUD2
NAA38ENSG00000128534.32589.136302091.416100.307904.191703.33380K562EIF2S2
NAA38ENSG00000128534.31337.072501729.99000-0.371704.634003.61640K562EIF3G
NAA38ENSG00000128534.31206.858501495.46910-0.309303.155701.90370K562EIF4B
NAA38ENSG00000128534.31778.594302289.99620-0.364602.068601.32460K562FMR1
NAA38ENSG00000128534.31756.484602149.00430-0.291002.396701.65530K562GPKOW
NAA38ENSG00000128534.34528.890902969.795400.608708.707507.31170K562HSPD1
NAA38ENSG00000128534.31777.712802220.66060-0.321003.058202.17370K562MAGOH
NAA38ENSG00000128534.31772.371502216.22440-0.322403.159102.17010K562MATR3
NAA38ENSG00000128534.31483.877702097.64540-0.499406.220004.88110K562METAP2
NAA38ENSG00000128534.31895.591902333.22450-0.299705.903704.87100K562NSUN2
NAA38ENSG00000128534.31491.781301975.92070-0.405504.171902.96590K562PCBP2
NAA38ENSG00000128534.31154.397001425.20840-0.304002.603301.83000K562POLR2G
NAA38ENSG00000128534.31481.904902157.47700-0.541907.971806.88590K562PTBP1
NAA38ENSG00000128534.35980.928004112.139600.5404010.298608.16370K562PUM1
NAA38ENSG00000128534.35442.154504230.752200.363203.436802.84100K562PUS1
NAA38ENSG00000128534.33540.488804122.24250-0.219502.291001.74220K562RBM15
NAA38ENSG00000128534.31510.447302069.01020-0.454004.802803.65990K562RBM22
NAA38ENSG00000128534.31528.437902177.24440-0.510405.353203.76880K562NELFE
NAA38ENSG00000128534.31264.424101962.83250-0.634507.119205.41840K562RPS3
NAA38ENSG00000128534.32075.685202358.83560-0.184502.207001.36290K562SRPK2
NAA38ENSG00000128534.3950.449901235.29520-0.378202.325201.39810K562SUPV3L1
NAA38ENSG00000128534.32050.525202473.97140-0.270803.727802.90490K562UPF1
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for NAA38 is not available on ENCORE database.





4 RBPs can affect the splicing of NAA38 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
A5SSNAA38ENSG00000128534.3chr7+1178242201178243791178242201178243341178257001178257480.304000.000000.00000longerK562AQR
A5SSNAA38ENSG00000128534.3chr7+117824197117824379117824197117824308117825700117825748-0.082000.006490.08928shorterK562AQR
A5SSNAA38ENSG00000128534.3chr7+1178242201178243791178242201178243341178257001178257480.102000.000370.08989longerHepG2DDX59
A5SSNAA38ENSG00000128534.3chr7+1178242201178243791178242201178243341178257001178257480.166000.000020.00346longerK562PRPF8
MXENAA38ENSG00000128534.3chr7+117825707117825748117828331117828459117824085117824308117831965117832878-0.061000.000010.004732includedK562UTP3

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for NAA38 is not avaliable on ENCORE database.