NAA35

General Information

Gene Name       : NAA35
Gene ID             : ENSG00000135040.15
Essential Gene : Yes

Functions

Localization

Domains (AlphaFold: NAA35)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878NAA35ENSG00000135040.1523.6320.9222.27ENCSR000AEF
HepG2NAA35ENSG00000135040.1516.0923.6519.87ENCSR985KAT
K562NAA35ENSG00000135040.1522.1923.4022.80ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for NAA35 is not avaliable on ENCORE database.



Proteins bound to RNA
  • NAA35 RNA is bound by 18 proteins.  







eCLIP assay for NAA35 is not avaliable on ENCORE database.





18 proteins are bound to NAA35 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr98863704388637136+3'-UTR3.609526.57673K562KHSRP
chr98855706988557152+5'-UTR,CDS,intron-Proximal4.212153.33043HepG2NCBP2
chr98855609688556194+5'-UTR,intron-Proximal3.628767.11310HepG2NCBP2
chr98859002888590072+CDS,intron-Proximal3.022186.14940K562DDX24
chr98858990088589947+CDS3.576209.41803HepG2BCLAF1
chr98859160188591639+CDS4.349927.97334HepG2BCLAF1
chr98862235488622378+CDS4.023903.49905HepG2PPIG
chr98861134288611379+CDS3.372824.34695HepG2BCLAF1
chr98859003188590073+CDS,intron-Proximal3.635513.04123K562LIN28B
chr98863317788633205+CDS3.906385.65086HepG2BCLAF1
chr98859156588591652+CDS,intron-Proximal3.988179.95582K562SF3B4
chr98859004288590121+CDS,intron-Proximal5.6211711.43008HepG2PRPF8
chr98859322388593292+CDS3.416744.06757K562UCHL5
chr98857339788573454+CDS4.165284.23295HepG2GRWD1
chr98855717888557194+CDS4.938446.58593HepG2BCLAF1
chr98859002888590070+CDS,intron-Proximal4.012878.79898HepG2BCLAF1
chr98859160188591657+CDS,intron-Proximal4.645823.77802HepG2U2AF2
chr98863327288633338+CDS,intron-Proximal4.911554.68690HepG2PRPF8
chr98859229088592349+CDS3.599417.42278HepG2BCLAF1
chr98859002188590167+CDS,intron-Proximal3.556466.49827K562PRPF8
chr98857341088573486+CDS3.446865.35144K562ZNF622
chr98863241788632466+CDS3.474704.22917HepG2PPIG
chr98863117788631279+intron-Distal3.179073.04623HepG2KHSRP
chr98861582288615950+intron-Distal4.474814.75674K562MATR3
chr98859147288591534+intron-Distal,intron-Proximal3.938305.18845HepG2U2AF2
chr98861574388615783+intron-Distal4.8730913.19705K562EXOSC5
chr98861561888615730+intron-Distal4.278003.45817K562MATR3
chr98861530088615332+intron-Distal4.655044.80399K562EXOSC5
chr98861802188618091+intron-Distal5.284656.73640K562EXOSC5
chr98861569088615737+intron-Distal4.307477.31419K562EXOSC5
chr98861579688615947+intron-Distal4.386094.31871HepG2HNRNPM
chr98861715888617207+intron-Distal4.846057.06134K562EXOSC5
chr98858359388583740+intron-Distal4.713499.10637HepG2QKI
chr98857546088575488+intron-Distal3.168384.35941K562KHSRP
chr98861673488616788+intron-Distal3.451505.57520K562EXOSC5
chr98861707488617122+intron-Distal4.779186.08953K562EXOSC5
chr98861690188616974+intron-Distal4.890286.26399K562MATR3
chr98861809188618162+intron-Distal5.167987.38693K562EXOSC5
chr98857479288574903+intron-Distal,intron-Proximal5.084746.51328K562KHSRP
chr98863132788631416+intron-Distal,intron-Proximal4.550424.96658K562KHSRP
chr98863601588636070+intron-Distal3.690725.35459K562KHSRP
chr98863119288631313+intron-Distal4.015996.41553K562KHSRP
chr98863617188636226+intron-Distal3.918093.45805K562KHSRP
chr98857545488575530+intron-Distal4.395765.10338HepG2KHSRP
chr98857744588577567+intron-Distal4.872845.85485K562KHSRP
chr98861564288615664+intron-Distal4.068453.59909K562EXOSC5
chr98858577088585815+intron-Distal3.885023.63454HepG2SUGP2
chr98861691588616972+intron-Distal3.934355.20902K562EXOSC5
chr98863607088636129+intron-Distal4.842687.17304K562KHSRP
chr98861580888615908+intron-Distal4.2338115.09992K562EXOSC5
chr98859131788591406+intron-Distal4.881264.72162K562KHSRP
chr98861612288616179+intron-Distal4.6468410.61559K562EXOSC5
chr98858483188584888+intron-Distal3.406534.60009HepG2SUGP2
chr98861722588617247+intron-Distal3.457253.14999K562EXOSC5
chr98863234388632399+intron-Proximal4.5237110.68651K562SF3B4
chr98859009688590150+intron-Proximal5.356064.83371K562EFTUD2
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for NAA35 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for NAA35 is not available on ENCORE database.

  • 59 RBPs can affect the levels of NAA35.  








The Knockdown/knockout RNA-Seq assay for NAA35 is not available on ENCORE database.





59 RBPs can affect the gene expression of NAA35 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
NAA35ENSG00000135040.111233.56320650.209100.923809.974209.03060HepG2AKAP1
NAA35ENSG00000135040.11906.00720703.567200.364702.909002.11990HepG2CALR
NAA35ENSG00000135040.11625.61050493.234700.342901.965701.38150HepG2DDX21
NAA35ENSG00000135040.11443.13030562.43570-0.344002.453001.80880HepG2DKC1
NAA35ENSG00000135040.11424.91860550.49160-0.373502.676701.98150HepG2DNAJC21
NAA35ENSG00000135040.11440.81780545.68040-0.307902.363101.75110HepG2DNAJC2
NAA35ENSG00000135040.11772.76320573.463100.430202.741702.05370HepG2FXR1
NAA35ENSG00000135040.11365.47040820.66160-1.1670014.0029012.67180HepG2GPKOW
NAA35ENSG00000135040.11413.84970555.76600-0.425402.674602.03760HepG2HNRNPA1
NAA35ENSG00000135040.11460.77420618.20350-0.424002.663401.98220HepG2HNRNPC
NAA35ENSG00000135040.11554.18580784.15050-0.500806.018005.01430HepG2HNRNPF
NAA35ENSG00000135040.11586.42800745.86460-0.347003.277502.54860HepG2HNRNPL
NAA35ENSG00000135040.11482.11870614.11510-0.349102.819202.20670HepG2HNRNPU
NAA35ENSG00000135040.11490.94380772.16130-0.653307.604506.46000HepG2IGF2BP1
NAA35ENSG00000135040.11509.96340627.29540-0.298802.592601.88100HepG2ILF2
NAA35ENSG00000135040.11759.45050576.893000.396602.151201.59070HepG2MATR3
NAA35ENSG00000135040.11837.88200632.023500.406703.344002.45770HepG2MSI2
NAA35ENSG00000135040.11509.13860694.43160-0.447802.931402.16100HepG2NSUN2
NAA35ENSG00000135040.11424.39680547.73870-0.368102.647001.92460HepG2PPIL4
NAA35ENSG00000135040.11262.20700423.87870-0.692904.168403.20080HepG2PRPF8
NAA35ENSG00000135040.11582.50430775.08510-0.412102.992702.37700HepG2PUF60
NAA35ENSG00000135040.11776.74500506.928300.615602.987902.25740HepG2RAVER1
NAA35ENSG00000135040.11614.80860743.22240-0.273702.138201.50790HepG2SLBP
NAA35ENSG00000135040.111197.91240979.869500.289803.139402.61760HepG2SRFBP1
NAA35ENSG00000135040.111028.29050625.999800.7159011.8235010.99180HepG2SRSF1
NAA35ENSG00000135040.11562.45150770.41290-0.453905.109804.20990HepG2SRSF7
NAA35ENSG00000135040.11405.92970509.26690-0.327202.406201.88430HepG2SRSF9
NAA35ENSG00000135040.11664.74490850.77280-0.356003.564402.99870HepG2SSB
NAA35ENSG00000135040.11391.88100596.66540-0.606505.687905.02130HepG2TIAL1
NAA35ENSG00000135040.11460.64160602.06590-0.386303.310602.70610HepG2TRIM56
NAA35ENSG00000135040.111015.80640625.868700.6986012.0031010.89140HepG2UTP3
NAA35ENSG00000135040.11405.05110538.41030-0.410601.941901.32690HepG2XRN2
NAA35ENSG00000135040.11919.809801512.77430-0.717809.016408.05500K562AQR
NAA35ENSG00000135040.11989.907801364.63020-0.463103.087101.55020K562CKAP4
NAA35ENSG00000135040.111222.974001499.73180-0.294303.142901.95780K562CPEB4
NAA35ENSG00000135040.11804.96370998.49860-0.310802.277601.55940K562CPSF6
NAA35ENSG00000135040.111921.833102373.48760-0.304503.140702.10330K562CELF1
NAA35ENSG00000135040.111586.853201342.618600.241002.495501.66910K562DKC1
NAA35ENSG00000135040.11508.81210742.42970-0.545103.370802.35990K562EFTUD2
NAA35ENSG00000135040.11790.11280985.01400-0.318102.904002.17040K562EIF2S2
NAA35ENSG00000135040.11541.37880806.37340-0.574805.543704.38650K562EIF4A3
NAA35ENSG00000135040.111595.312801930.31440-0.275002.745301.81060K562EIF4G2
NAA35ENSG00000135040.11642.46470861.06140-0.422502.751101.83900K562FTO
NAA35ENSG00000135040.111378.36530991.094800.475803.088702.33460K562G3BP2
NAA35ENSG00000135040.11605.99910953.33550-0.653707.186605.90600K562GPKOW
NAA35ENSG00000135040.11646.128301312.62090-1.0226018.2423016.23390K562GRSF1
NAA35ENSG00000135040.11618.95830862.53100-0.478704.073403.36560K562HNRNPC
NAA35ENSG00000135040.111050.274301402.36340-0.417104.146402.82460K562HNRNPL
NAA35ENSG00000135040.11869.930401112.13450-0.354403.578002.56160K562HNRNPU
NAA35ENSG00000135040.11823.541701192.04910-0.533504.791203.67750K562MAGOH
NAA35ENSG00000135040.11618.59250930.55550-0.589106.256604.90990K562METAP2
NAA35ENSG00000135040.11861.556001127.53750-0.388204.750303.71360K562MTPAP
NAA35ENSG00000135040.11943.384101252.70610-0.409106.593105.50840K562NSUN2
NAA35ENSG00000135040.11767.746201060.73270-0.466403.670702.54600K562PCBP2
NAA35ENSG00000135040.111564.718801983.45850-0.342103.281201.72170K562PNPT1
NAA35ENSG00000135040.11532.05330722.46510-0.441402.281701.59790K562PRPF8
NAA35ENSG00000135040.111576.753802106.11590-0.417604.356403.33830K562PUF60
NAA35ENSG00000135040.111690.122002194.93660-0.377105.202303.86890K562PUM2
NAA35ENSG00000135040.11785.005401110.79880-0.500803.949502.92980K562RBM22
NAA35ENSG00000135040.11529.21290705.40430-0.414603.076202.02420K562RCC2
NAA35ENSG00000135040.11500.76160736.03820-0.555702.514401.73770K562RPS19
NAA35ENSG00000135040.11907.080801236.23400-0.446605.605904.47520K562SF3A3
NAA35ENSG00000135040.11897.433001135.26760-0.339202.532501.85110K562SRSF1
NAA35ENSG00000135040.11557.65590735.53840-0.399402.825501.75910K562SRSF4
NAA35ENSG00000135040.11815.72690665.316800.293902.039101.33410K562SYNCRIP
NAA35ENSG00000135040.11853.032201149.10290-0.429802.877502.15740K562TARDBP
NAA35ENSG00000135040.11571.71960743.82120-0.379602.166101.34740K562TIAL1
NAA35ENSG00000135040.11971.302901328.27790-0.451606.792005.72220K562UPF1
NAA35ENSG00000135040.111396.062901704.09920-0.287602.207301.44710K562ZC3H8
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for NAA35 is not available on ENCORE database.





12 RBPs can affect the splicing of NAA35 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SENAA35ENSG00000135040.11chr9+886279608862805988624779886248468862863388628812-0.143000.002360.04166excludedK562SRSF1
SENAA35ENSG00000135040.11chr9+885747078857478288573386885735018857692788577095-0.064000.005760.08464excludedK562SRSF1
SENAA35ENSG00000135040.11chr9+886279608862805988624779886248468862863388628812-0.279000.000010.00054excludedK562SF3B4
SENAA35ENSG00000135040.11chr9+885712748857130888557069885571988857338688573501-0.091000.000390.00965excludedK562SF3B4
SENAA35ENSG00000135040.11chr9+8858151088581589885769278857709588589881885899480.058000.000480.01100includedHepG2U2AF1
SENAA35ENSG00000135040.11chr9+886279608862805988624779886248468862863388628812-0.223000.000000.00001excludedK562AQR
SENAA35ENSG00000135040.11chr9+886279608862805988624779886248468862863388628812-0.298000.000000.00006excludedK562PUS1
SENAA35ENSG00000135040.11chr9+886279608862805988624779886248468862863388628812-0.508000.000000.00000excludedK562U2AF1
SENAA35ENSG00000135040.11chr9+886279608862805988624779886248468862863388628812-0.535000.000000.00000excludedK562U2AF2
SENAA35ENSG00000135040.11chr9+886279608862805988624779886248468862863388628812-0.246000.001350.03431excludedK562RBM15
A3SSNAA35ENSG00000135040.11chr9+885931398859329688593181885932968859227788592361-0.083000.000320.07601shorterHepG2AKAP1
A3SSNAA35ENSG00000135040.11chr9+8855705588557198885570698855719888556443885567890.175000.000350.00270longerK562AQR
A5SSNAA35ENSG00000135040.11chr9+8859159988591750885915998859165088592277885924870.147000.000350.00767longerK562AQR
A5SSNAA35ENSG00000135040.11chr9+8863145388631665886314538863159088632412886324800.139000.000050.00135longerK562AQR
A5SSNAA35ENSG00000135040.11chr9+885915998859175088591599885916508859227788592361-0.112000.000240.03916shorterHepG2AKAP1
A5SSNAA35ENSG00000135040.11chr9+8859227788592487885922778859236188593181885932960.238000.000290.04968longerHepG2PRPF8
A5SSNAA35ENSG00000135040.11chr9+8855609688556320885560968855618888557069885571980.395000.000000.04051longerK562DDX6
A5SSNAA35ENSG00000135040.11chr9+885560968855632088556096885561888855706988557198-0.212000.000120.08522shorterK562HNRNPL
RINAA35ENSG00000135040.11chr9+8858988588590072885898858858994888590028885900720.061000.000430.02675includedK562BUD13
MXENAA35ENSG00000135040.11chr9+88624779886248468862796088628059886222728862237988628633886288120.113000.009510.060831includedK562AQR
MXENAA35ENSG00000135040.11chr9+88622272886223798862477988624846886113138861149288627960886280590.072000.006630.045431includedK562AQR
MXENAA35ENSG00000135040.11chr9+8859227788592361885923988859248788591599885916508859318188593296-0.166000.001160.086572includedHepG2PRPF8

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for NAA35 is not avaliable on ENCORE database.