MTA3

General Information

Gene Name       : MTA3
Gene ID             : ENSG00000057935.13
Essential Gene : No

Functions

Localization

Domains (AlphaFold: MTA3)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878MTA3ENSG00000057935.1331.7125.0728.39ENCSR000AEF
HepG2MTA3ENSG00000057935.1351.7171.1561.43ENCSR985KAT
K562MTA3ENSG00000057935.1317.4819.2418.36ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for MTA3 is not avaliable on ENCORE database.



Proteins bound to RNA
  • MTA3 RNA is bound by 18 proteins.  







eCLIP assay for MTA3 is not avaliable on ENCORE database.





18 proteins are bound to MTA3 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr24287126442871385+3'-UTR,CDS,intron-Proximal3.2203919.90689HepG2BCLAF1
chr24288690042886914+3'-UTR,CDS,intron-Proximal3.3548911.49744HepG2BCLAF1
chr24286735142867376+3'-UTR,CDS,intron-Distal4.1176013.37200HepG2BCLAF1
chr24288691442886959+3'-UTR,CDS3.1909513.41553HepG2BCLAF1
chr24293637942936458+3'-UTR,intron-Distal3.568285.55382HepG2CSTF2
chr24286731042867351+3'-UTR,CDS,intron-Distal,intron-Proximal3.3990514.99208HepG2BCLAF1
chr24288341642883443+3'-UTR,CDS,intron-Proximal3.5541011.20660HepG2BCLAF1
chr24283666742836725+5'-UTR,CDS,intron-Distal,intron-Proximal3.0312819.71496HepG2BCLAF1
chr24279763342797644+5'-UTR,CDS4.698837.25648HepG2GRWD1
chr24279757642797633+5'-UTR,CDS,intron-Proximal3.414388.81470HepG2GRWD1
chr24279577542795917+5'-UTR,CDS,intron-Distal,intron-Proximal3.508126.24463HepG2GRWD1
chr24279573742795794+5'-UTR,intron-Distal4.372005.00478HepG2PCBP2
chr24279757642797592+5'-UTR,CDS,intron-Proximal4.194756.84316HepG2BCLAF1
chr24283659742836667+5'-UTR,CDS,intron-Distal,intron-Proximal3.6025415.59767HepG2BCLAF1
chr24283668642836769+5'-UTR,CDS,intron-Distal,intron-Proximal3.384325.73990HepG2PRPF8
chr24293135942931458+CDS,intron-Distal4.4545720.53678HepG2BCLAF1
chr24293135342931459+CDS,intron-Distal,intron-Proximal4.0666417.98460HepG2PPIG
chr24292291242922981+CDS,intron-Proximal3.878374.22917HepG2PPIG
chr24292491442924931+CDS,intron-Proximal4.4009815.99938HepG2BCLAF1
chr24292296242922981+CDS,intron-Proximal4.1620915.02931HepG2BCLAF1
chr24292293242922962+CDS4.1358514.75464HepG2BCLAF1
chr24281369542813714+intron-Distal3.319943.58583HepG2HNRNPL
chr24281373442813852+intron-Distal3.175065.59020HepG2AGGF1
chr24281346942813521+intron-Distal3.871643.07260HepG2AGGF1
chr24292005742920124+intron-Distal4.352004.53347HepG2SUGP2
chr24275279042752850+intron-Distal4.444534.52538HepG2PTBP1
chr24281169042811733+intron-Distal3.445673.15341HepG2AGGF1
chr24289605942896141+intron-Distal3.622484.83406HepG2QKI
chr24291930542919370+intron-Distal4.415525.01910HepG2MATR3
chr24291117242911243+intron-Distal3.949255.12612HepG2HNRNPL
chr24289440742894497+intron-Distal4.309204.77636HepG2HNRNPL
chr24293071742930783+intron-Distal3.227573.70059HepG2U2AF2
chr24281364142813695+intron-Distal3.069524.60251HepG2HNRNPL
chr24291907542919127+intron-Distal4.173694.28663HepG2SUGP2
chr24291693242916972+intron-Distal4.022013.62238HepG2MATR3
chr24281192942812032+intron-Distal3.955603.98468HepG2ILF3
chr24295147142951532+intron-Distal4.198003.98095HepG2HNRNPL
chr24293972742939779+intron-Distal3.942833.30440HepG2QKI
chr24288931642889417+intron-Distal4.078263.73609HepG2KHSRP
chr24291930442919395+intron-Distal3.455697.27760HepG2SUGP2
chr24279594742796030+intron-Distal,intron-Proximal3.195233.80737HepG2NKRF
chr24286708242867129+intron-Distal3.031413.42396HepG2U2AF2
chr24292157942921667+intron-Distal4.035273.54208HepG2SUGP2
chr24279609842796133+intron-Distal4.762054.22343HepG2XPO5
chr24295148442951537+intron-Distal3.899293.56692HepG2AGGF1
chr24288178242881833+intron-Distal3.664736.02668HepG2SUGP2
chr24281375142813833+intron-Distal4.847696.28496K562AGGF1
chr24291653342916662+intron-Distal4.426895.02084HepG2HNRNPM
chr24293684242936918+intron-Distal3.296203.76460HepG2HNRNPL
chr24292020542920321+intron-Distal4.6981510.39610HepG2PCBP2
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for MTA3 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for MTA3 is not available on ENCORE database.

  • 85 RBPs can affect the levels of MTA3.  








The Knockdown/knockout RNA-Seq assay for MTA3 is not available on ENCORE database.





85 RBPs can affect the gene expression of MTA3 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
MTA3ENSG00000057935.91319.879901813.47920-0.458408.993708.02540HepG2ACO1
MTA3ENSG00000057935.92093.917603428.51020-0.711407.923807.07460HepG2AKAP1
MTA3ENSG00000057935.91386.991601851.30290-0.416604.024803.31820HepG2BOP1
MTA3ENSG00000057935.91578.084602695.17840-0.7722011.109609.65930HepG2CIRBP
MTA3ENSG00000057935.91816.304402635.08280-0.5368011.4068010.27660HepG2CELF1
MTA3ENSG00000057935.92291.550703284.31830-0.519305.227004.39070HepG2DDX3X
MTA3ENSG00000057935.91050.519901493.89690-0.508003.649402.77570HepG2DDX55
MTA3ENSG00000057935.91670.302302090.76790-0.323902.504901.53880HepG2DDX5
MTA3ENSG00000057935.92112.311402821.14460-0.417503.087002.43780HepG2DDX6
MTA3ENSG00000057935.91206.942701700.31680-0.4944010.927709.72920HepG2DNAJC2
MTA3ENSG00000057935.91515.405101952.79080-0.365802.783001.86070HepG2EEF2
MTA3ENSG00000057935.91219.201201628.02470-0.417203.446802.20530HepG2EFTUD2
MTA3ENSG00000057935.91868.801402712.18630-0.537305.471804.65450HepG2EIF2S1
MTA3ENSG00000057935.91670.899502997.35800-0.8431010.635609.40690HepG2EIF4A3
MTA3ENSG00000057935.91711.090802918.20880-0.770207.299306.21130HepG2EIF4B
MTA3ENSG00000057935.92174.778702677.72990-0.300102.449701.68100HepG2EIF4G2
MTA3ENSG00000057935.92588.157402020.005800.357503.026101.88760HepG2ESF1
MTA3ENSG00000057935.92357.352003052.53050-0.372806.394605.54250HepG2ETF1
MTA3ENSG00000057935.91847.414802805.30790-0.602706.300105.31680HepG2G3BP1
MTA3ENSG00000057935.91346.784001806.84930-0.424003.549002.38750HepG2GNB2L1
MTA3ENSG00000057935.91280.577901731.83920-0.435504.535503.73570HepG2HNRNPA1
MTA3ENSG00000057935.91073.509801926.37080-0.8436014.2833012.82780HepG2HNRNPC
MTA3ENSG00000057935.92049.837201771.639600.210302.095801.46520HepG2HNRNPF
MTA3ENSG00000057935.91783.793002840.35600-0.671109.638008.40100HepG2HNRNPK
MTA3ENSG00000057935.92214.727802581.09110-0.220903.434902.69180HepG2HNRNPL
MTA3ENSG00000057935.91789.505202851.57560-0.672208.585307.46730HepG2IGF2BP2
MTA3ENSG00000057935.91642.457201954.70970-0.251103.673002.83920HepG2ILF2
MTA3ENSG00000057935.91386.466001770.23830-0.352503.136901.92850HepG2LARP7
MTA3ENSG00000057935.91804.459503025.04150-0.745409.967408.74510HepG2MAGOH
MTA3ENSG00000057935.91931.965503042.00840-0.655007.047206.07600HepG2MATR3
MTA3ENSG00000057935.92052.787403113.69410-0.601006.511305.55730HepG2NCBP2
MTA3ENSG00000057935.91339.403502809.64460-1.0688034.2165031.80990HepG2NOL12
MTA3ENSG00000057935.92800.123101630.274000.7803012.8634011.37100HepG2NSUN2
MTA3ENSG00000057935.91827.153802773.08240-0.601906.566605.46310HepG2PABPC4
MTA3ENSG00000057935.91537.419701894.14450-0.301003.896902.91020HepG2PARN
MTA3ENSG00000057935.91830.573502789.80730-0.6079016.4527015.17500HepG2PCBP1
MTA3ENSG00000057935.92863.511301822.138900.6521017.8054016.12560HepG2PRPF4
MTA3ENSG00000057935.91927.216202838.70260-0.5587013.5299012.50150HepG2PTBP1
MTA3ENSG00000057935.91593.624602847.05680-0.8372038.5007036.80710HepG2PUM1
MTA3ENSG00000057935.91309.305102092.47950-0.676404.154403.29840HepG2RAVER1
MTA3ENSG00000057935.91317.443202551.36280-0.9535029.7802028.44270HepG2RBM22
MTA3ENSG00000057935.92307.660302790.23660-0.274002.563401.91110HepG2RBM25
MTA3ENSG00000057935.91600.456002134.63050-0.415503.728302.56810HepG2RBM27
MTA3ENSG00000057935.92497.086003159.22890-0.339305.879105.13790HepG2NELFE
MTA3ENSG00000057935.92512.173401908.593500.396303.663602.89570HepG2RPLP0
MTA3ENSG00000057935.91289.187802055.13230-0.672804.916503.67490HepG2RPS10
MTA3ENSG00000057935.91226.813301542.50550-0.330402.899002.27220HepG2RPS19
MTA3ENSG00000057935.91598.341301968.67720-0.300702.240501.51620HepG2RPS2
MTA3ENSG00000057935.91590.237802009.61140-0.337702.694601.63380HepG2RPS5
MTA3ENSG00000057935.9789.575201140.12370-0.530003.789402.88810HepG2RRP9
MTA3ENSG00000057935.91193.002101548.21090-0.376002.781201.83960HepG2SERBP1
MTA3ENSG00000057935.91442.840301819.82220-0.334902.781702.07330HepG2SF3B1
MTA3ENSG00000057935.91921.763202955.51080-0.6210017.1485015.86730HepG2SF3B4
MTA3ENSG00000057935.91317.706501987.32270-0.5928016.9749015.58700HepG2SMN1
MTA3ENSG00000057935.91409.890302132.59520-0.597004.631303.36230HepG2SMNDC1
MTA3ENSG00000057935.92159.934802881.69190-0.415908.735807.98270HepG2SRFBP1
MTA3ENSG00000057935.92160.114203084.89090-0.5141013.3843012.51150HepG2SRSF1
MTA3ENSG00000057935.91717.937902648.07170-0.6243016.5789015.22730HepG2SRSF5
MTA3ENSG00000057935.91893.478802509.70380-0.406508.247307.38530HepG2SRSF9
MTA3ENSG00000057935.92486.675703011.61900-0.276304.941504.15200HepG2SUCLG1
MTA3ENSG00000057935.92444.655602772.75800-0.181701.818701.34580HepG2TAF15
MTA3ENSG00000057935.92110.464602547.85290-0.271702.599201.78710HepG2TIA1
MTA3ENSG00000057935.91571.876601859.37780-0.242302.075601.62990HepG2TIAL1
MTA3ENSG00000057935.91313.136601876.07930-0.5147010.519409.52500HepG2TRIM56
MTA3ENSG00000057935.92206.080902620.17390-0.248202.174301.40550HepG2TUFM
MTA3ENSG00000057935.91477.596202014.22410-0.447004.607103.80630HepG2U2AF1
MTA3ENSG00000057935.92029.524502773.37930-0.450503.771202.78650HepG2UBE2L3
MTA3ENSG00000057935.91765.275302171.25060-0.298604.545303.68630HepG2UPF1
MTA3ENSG00000057935.91820.541302096.25440-0.203402.396301.82960HepG2UTP3
MTA3ENSG00000057935.91960.877701463.973300.421503.687402.85880HepG2XRN2
MTA3ENSG00000057935.91818.294302387.95750-0.393209.035808.19300HepG2ZNF622
MTA3ENSG00000057935.91415.472901000.865100.499908.005707.11090K562AGGF1
MTA3ENSG00000057935.9619.44500964.16080-0.638306.070105.25850K562AQR
MTA3ENSG00000057935.91406.401601036.991700.439506.489405.55020K562DDX47
MTA3ENSG00000057935.9588.65070456.300700.367302.582101.81200K562EIF3G
MTA3ENSG00000057935.9459.67340607.18680-0.401503.142502.50370K562FXR1
MTA3ENSG00000057935.9273.48680619.54650-1.1797014.5073013.22750K562HNRNPC
MTA3ENSG00000057935.91477.91260977.291600.596606.638205.41870K562HSPD1
MTA3ENSG00000057935.9556.28960781.48500-0.490404.400803.33530K562MAGOH
MTA3ENSG00000057935.9591.35030779.89360-0.399303.201202.20340K562MATR3
MTA3ENSG00000057935.91101.891801507.32330-0.452004.321302.43480K562NOL12
MTA3ENSG00000057935.9538.72730759.26460-0.495004.654003.81540K562PTBP1
MTA3ENSG00000057935.91122.165501503.51420-0.422104.112603.12380K562PUF60
MTA3ENSG00000057935.91323.638101032.863600.357802.751402.20960K562PUS1
MTA3ENSG00000057935.91292.953001006.335900.361503.735303.06150K562RBM15
MTA3ENSG00000057935.9534.84650709.69950-0.408102.625801.30320K562RBM34
MTA3ENSG00000057935.9668.90300487.868700.455202.809101.98630K562RPS19
MTA3ENSG00000057935.9672.81110864.56450-0.361802.409301.52770K562SRPK2
MTA3ENSG00000057935.9264.62380744.33690-1.4920027.5538025.33370K562SRSF1
MTA3ENSG00000057935.9621.99630470.681400.402103.153001.76650K562SSB
MTA3ENSG00000057935.9568.16590753.30790-0.406902.757702.05110K562TARDBP
MTA3ENSG00000057935.9386.78030534.27750-0.466102.624101.71460K562TIAL1
MTA3ENSG00000057935.9864.20760709.978900.283502.014801.32960K562U2AF2
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for MTA3 is not available on ENCORE database.





14 RBPs can affect the splicing of MTA3 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SEMTA3ENSG00000057935.9chr2+4291307342913233429095404290972942922904429229790.088000.000020.00088includedK562SRSF1
SEMTA3ENSG00000057935.9chr2+4292555442925634429249154292497442931336429314580.159000.002070.03745includedHepG2U2AF1
SEMTA3ENSG00000057935.9chr2+428673124286737642836597428367244287126642871384-0.059000.000190.00292excludedK562AQR
SEMTA3ENSG00000057935.9chr2+429255544292563442924915429249744293133642931458-0.181000.000710.07731excludedHepG2HNRNPUL1
SEMTA3ENSG00000057935.9chr2+429095404290972942886902428870024292290442922979-0.074000.000000.00000excludedHepG2SRSF1
SEMTA3ENSG00000057935.9chr2+4280892442809048428062464280634042836597428367240.054000.000000.00002includedHepG2HNRNPC
SEMTA3ENSG00000057935.9chr2+429130734291323342909540429097294292290442922979-0.065000.000260.04921excludedK562EIF3G
A3SSMTA3ENSG00000057935.9chr2+4293133342931458429313364293145842924915429249740.308000.019520.09343longerK562AQR
A3SSMTA3ENSG00000057935.9chr2+4293500642935194429350424293519442929446429314580.068000.002690.01676longerK562AQR
A5SSMTA3ENSG00000057935.9chr2+429360134293623642936013429361544294612742946214-0.064000.001790.09371shorterHepG2SRSF1
MXEMTA3ENSG00000057935.9chr2+4279757642797644428062464280634042795656427959134283659742836724-0.120000.002680.064812includedK562RBM15
MXEMTA3ENSG00000057935.9chr2+4283659742836724428673124286737642806246428063404287126642871384-0.145000.007640.072692includedK562DROSHA
MXEMTA3ENSG00000057935.9chr2+42797576427976444280624642806340427223024272239442836597428367240.066000.000790.043291includedHepG2SRSF9
MXEMTA3ENSG00000057935.9chr2+42913073429132334292290442922979429095404290972942931336429314580.060000.002540.020341includedK562AQR
MXEMTA3ENSG00000057935.9chr2+4279757642797644428062464280634042795656427959134283659742836724-0.136000.000750.045072includedK562UTP18
MXEMTA3ENSG00000057935.9chr2+4283659742836724428673124286737642806246428063404287126642871384-0.098000.001410.019742includedHepG2SFPQ
MXEMTA3ENSG00000057935.9chr2+4280624642806340428365974283672442797576427976444286731242867376-0.151000.000060.004182includedHepG2XRN2
MXEMTA3ENSG00000057935.9chr2+4283659742836724428673124286737642806246428063404287126642871384-0.130000.005690.033732includedHepG2U2AF2
MXEMTA3ENSG00000057935.9chr2+4283659742836724428673124286737642806246428063404287126642871384-0.133000.000010.000402includedHepG2HNRNPUL1
MXEMTA3ENSG00000057935.9chr2+42806246428063404283659742836724427975764279764442867312428673760.139000.000680.083071includedHepG2DDX52

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for MTA3 is not avaliable on ENCORE database.