MPDU1

General Information

Gene Name       : MPDU1
Gene ID             : ENSG00000129255.15
Essential Gene : No

Functions

Localization

Domains (AlphaFold: MPDU1)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878MPDU1ENSG00000129255.1581.9294.1188.02ENCSR000AEF
HepG2MPDU1ENSG00000129255.15107.00129.45118.22ENCSR985KAT
K562MPDU1ENSG00000129255.15124.01120.43122.22ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for MPDU1 is not avaliable on ENCORE database.



Proteins bound to RNA
  • MPDU1 RNA is bound by 10 proteins.  







eCLIP assay for MPDU1 is not avaliable on ENCORE database.





10 proteins are bound to MPDU1 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr1774911037491175+3'-UTR,intron-Distal4.0054916.66266K562UPF1
chr1774902427490331+3'-UTR,CDS,intron-Distal,intron-Proximal3.800913.79230K562SND1
chr1774913527491457+3'-UTR,CDS,intron-Distal,intron-Proximal6.2721314.82900HepG2AKAP1
chr1774900467490089+3'-UTR,CDS,intron-Distal,intron-Proximal3.932433.02572K562SND1
chr1774907437490837+3'-UTR,CDS,intron-Distal,intron-Proximal4.703438.33615HepG2SND1
chr1774905397490588+3'-UTR,CDS,intron-Distal4.331017.49297HepG2SND1
chr1774902497490336+3'-UTR,CDS,intron-Distal,intron-Proximal5.610037.39121HepG2RPS3
chr1774904757490513+3'-UTR,CDS,intron-Distal,intron-Proximal5.291326.24443HepG2RPS3
chr1774902267490269+3'-UTR,CDS,intron-Distal,intron-Proximal4.855864.65414HepG2SND1
chr1774909237490951+3'-UTR,intron-Distal5.060015.94150HepG2UPF1
chr1774913447491407+3'-UTR,intron-Distal,intron-Proximal5.1785821.82287K562UPF1
chr1774911697491271+3'-UTR,intron-Distal4.457646.71790K562AKAP1
chr1774872577487349+3'-UTR,CDS,intron-Proximal4.575847.87148HepG2PRPF8
chr1774913077491427+3'-UTR,CDS,intron-Distal,intron-Proximal3.7903011.22293HepG2FAM120A
chr1774911757491237+3'-UTR,intron-Distal3.559735.21096K562DDX55
chr1774909137490983+3'-UTR,intron-Distal3.9814312.24922K562UPF1
chr1774913977491472+3'-UTR,CDS,intron-Distal,intron-Proximal3.860614.63830HepG2LARP4
chr1774872867487344+3'-UTR,CDS,intron-Proximal5.366179.11053K562PRPF8
chr1774911987491245+3'-UTR,intron-Distal3.071626.61160HepG2FAM120A
chr1774909207490982+3'-UTR,intron-Distal3.380796.94069K562PABPC4
chr1774912727491463+3'-UTR,CDS,intron-Distal,intron-Proximal6.5567469.89633HepG2UPF1
chr1774914077491483+3'-UTR,CDS,intron-Distal,intron-Proximal7.2104729.18078K562UPF1
chr1774909137490993+3'-UTR,intron-Distal4.425006.68355HepG2AKAP1
chr1774912527491346+3'-UTR,intron-Distal,intron-Proximal5.1694115.65985HepG2AKAP1
chr1774912817491327+3'-UTR,intron-Distal,intron-Proximal3.7431610.02205K562UPF1
chr1774911747491246+3'-UTR,intron-Distal4.9043211.76398HepG2AKAP1
chr1774911957491276+3'-UTR,intron-Distal3.934254.91517HepG2LARP4
chr1774911897491246+3'-UTR,intron-Distal5.8763029.53352HepG2UPF1
chr1774911827491281+3'-UTR,intron-Distal3.9486324.11587K562UPF1
chr1774872787487339+3'-UTR,CDS,intron-Proximal5.360595.65342K562AQR
chr1774911127491174+3'-UTR,intron-Distal5.361637.53166HepG2AKAP1
chr1774911207491169+3'-UTR,intron-Distal4.767539.06961HepG2UPF1
chr1774890497489111+CDS,intron-Distal,intron-Proximal4.826516.60283HepG2RPS3
chr1774890997489165+CDS,intron-Distal,intron-Proximal4.734824.86944K562AQR
chr1774890147489087+CDS,intron-Distal,intron-Proximal5.035845.26064K562AQR
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for MPDU1 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for MPDU1 is not available on ENCORE database.

  • 70 RBPs can affect the levels of MPDU1.  








The Knockdown/knockout RNA-Seq assay for MPDU1 is not available on ENCORE database.





70 RBPs can affect the gene expression of MPDU1 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
MPDU1ENSG00000129255.101282.078401599.57710-0.319201.784001.34700HepG2AKAP1
MPDU1ENSG00000129255.101148.10860945.070400.280702.757301.99150HepG2AKAP8L
MPDU1ENSG00000129255.10648.566201449.95740-1.1607035.2070033.25390HepG2AUH
MPDU1ENSG00000129255.10529.20450761.62560-0.525304.333103.60330HepG2BOP1
MPDU1ENSG00000129255.101781.991101257.422400.502904.744703.74710HepG2CIRBP
MPDU1ENSG00000129255.10913.76230485.076600.913506.715905.52650HepG2CNOT7
MPDU1ENSG00000129255.101051.75990789.628800.413504.467103.01310HepG2DDX1
MPDU1ENSG00000129255.101898.948501532.244300.309502.013901.47130HepG2DDX3X
MPDU1ENSG00000129255.10758.693701037.69000-0.451803.132502.31740HepG2DDX55
MPDU1ENSG00000129255.101004.73020774.265900.375803.882303.06120HepG2DNAJC21
MPDU1ENSG00000129255.101270.24900813.628600.642606.507705.15200HepG2EEF2
MPDU1ENSG00000129255.10531.87010764.85520-0.524103.194001.99560HepG2AGO1
MPDU1ENSG00000129255.101794.301001398.295300.359702.294801.71010HepG2EIF4A3
MPDU1ENSG00000129255.10956.301801361.50040-0.509703.141402.41120HepG2EIF4B
MPDU1ENSG00000129255.101084.086401405.08660-0.374204.652003.60880HepG2EIF4G1
MPDU1ENSG00000129255.101444.534301664.67090-0.204601.813701.30570HepG2ETF1
MPDU1ENSG00000129255.10882.016201169.88740-0.407502.359901.64460HepG2FIP1L1
MPDU1ENSG00000129255.10667.28620896.74230-0.426403.468602.59160HepG2FUBP3
MPDU1ENSG00000129255.10647.08120851.82920-0.396602.466301.50950HepG2GNB2L1
MPDU1ENSG00000129255.101078.36040781.684100.464104.107203.34290HepG2HNRNPA1
MPDU1ENSG00000129255.101069.838001308.87980-0.290902.884101.93290HepG2HNRNPA2B1
MPDU1ENSG00000129255.101503.577501297.275600.212802.446201.80810HepG2HNRNPL
MPDU1ENSG00000129255.10978.64120756.342600.371602.360101.77340HepG2HNRNPLL
MPDU1ENSG00000129255.101043.50290882.284400.242002.639401.92170HepG2ILF2
MPDU1ENSG00000129255.10909.979101338.12170-0.556303.843202.64170HepG2KHSRP
MPDU1ENSG00000129255.101180.194201412.19660-0.258902.152801.47830HepG2NOL12
MPDU1ENSG00000129255.10271.88190443.36310-0.705503.333602.35410HepG2PABPC1
MPDU1ENSG00000129255.10906.375201293.67830-0.513304.230803.35000HepG2PABPC4
MPDU1ENSG00000129255.101091.450301353.20480-0.310103.677302.99880HepG2PCBP1
MPDU1ENSG00000129255.10708.15440966.16430-0.448202.276801.33250HepG2PCBP2
MPDU1ENSG00000129255.10596.23870800.31730-0.424702.847902.02690HepG2PRPF8
MPDU1ENSG00000129255.101099.084701376.90830-0.325103.599202.99290HepG2PTBP1
MPDU1ENSG00000129255.101108.710501430.01780-0.367203.622702.86020HepG2PUM2
MPDU1ENSG00000129255.101257.48370958.099500.392205.570204.75180HepG2PUS1
MPDU1ENSG00000129255.10898.970501491.28580-0.7302013.3014012.07990HepG2QKI
MPDU1ENSG00000129255.10859.687001353.41500-0.654709.116907.94850HepG2RBM25
MPDU1ENSG00000129255.10278.53660468.50460-0.750204.531902.58770HepG2RBM47
MPDU1ENSG00000129255.10947.641501532.39020-0.6934014.5591013.50160HepG2NELFE
MPDU1ENSG00000129255.101045.910901427.17070-0.448406.792305.88850HepG2RECQL
MPDU1ENSG00000129255.101986.492601467.024200.437204.448003.61150HepG2RPLP0
MPDU1ENSG00000129255.10612.81880791.66210-0.369402.120301.42420HepG2RRP9
MPDU1ENSG00000129255.10899.99710645.021700.480503.754802.65740HepG2SERBP1
MPDU1ENSG00000129255.10965.891701433.58980-0.5697010.321509.28790HepG2SF3B4
MPDU1ENSG00000129255.10995.104001292.65680-0.377405.300304.38140HepG2SLBP
MPDU1ENSG00000129255.10725.484201571.53110-1.1152032.6547031.42830HepG2SRFBP1
MPDU1ENSG00000129255.10707.009701217.33190-0.7839017.8495016.67040HepG2SRSF9
MPDU1ENSG00000129255.101941.299301364.508900.508505.976405.27770HepG2SSB
MPDU1ENSG00000129255.10252.34250423.72610-0.747704.876403.37570HepG2STIP1
MPDU1ENSG00000129255.101236.992601513.76690-0.291303.670702.97170HepG2SUCLG1
MPDU1ENSG00000129255.10684.919301344.90860-0.9735022.4304021.05230HepG2TAF15
MPDU1ENSG00000129255.10929.99150737.332300.334802.112701.46740HepG2TARDBP
MPDU1ENSG00000129255.101437.70360723.366300.990905.721604.24210HepG2TBRG4
MPDU1ENSG00000129255.10853.102401235.84850-0.534706.647105.35430HepG2TIA1
MPDU1ENSG00000129255.10840.224001394.11950-0.730507.094005.72710HepG2UBE2L3
MPDU1ENSG00000129255.10324.87700610.16220-0.909309.445308.04440HepG2UCHL5
MPDU1ENSG00000129255.101232.582401032.002000.256102.644301.95870HepG2UPF1
MPDU1ENSG00000129255.101406.401901135.010200.309204.391303.74390HepG2ZNF622
MPDU1ENSG00000129255.10429.23710556.27780-0.374002.925901.37520K562AKAP1
MPDU1ENSG00000129255.10593.11720834.03640-0.491803.679602.67270K562BOP1
MPDU1ENSG00000129255.101320.08640939.530200.490502.399001.42100K562CNOT7
MPDU1ENSG00000129255.10578.22890769.17040-0.411703.037201.92700K562CSTF2
MPDU1ENSG00000129255.101406.66560914.147900.621704.986503.22830K562EEF2
MPDU1ENSG00000129255.10819.66300507.616500.691209.121407.68010K562EIF3G
MPDU1ENSG00000129255.10796.22460588.850800.435203.353002.45240K562EIF4A3
MPDU1ENSG00000129255.101524.107701190.507500.356302.968002.08780K562FIP1L1
MPDU1ENSG00000129255.10701.24930902.33050-0.363702.450301.64400K562FMR1
MPDU1ENSG00000129255.10814.94140612.378500.412203.946203.24240K562FXR1
MPDU1ENSG00000129255.10360.37430500.59440-0.474102.357901.71270K562G3BP2
MPDU1ENSG00000129255.101095.523801413.39730-0.367503.438401.33790K562HNRNPH1
MPDU1ENSG00000129255.10992.335901245.57270-0.327903.189002.23280K562HNRNPU
MPDU1ENSG00000129255.10487.59550722.97980-0.568303.455102.39800K562KRR1
MPDU1ENSG00000129255.10489.61120628.81070-0.361002.237201.36220K562PCBP2
MPDU1ENSG00000129255.101268.209601708.59970-0.430003.425402.49910K562PCBP3
MPDU1ENSG00000129255.101012.962201310.55150-0.371603.533102.62050K562POLR2G
MPDU1ENSG00000129255.101740.742401351.549200.365003.095502.21940K562PPIG
MPDU1ENSG00000129255.101023.02900686.666300.575106.891605.87860K562PTBP1
MPDU1ENSG00000129255.101673.244301987.52430-0.248302.411701.51370K562PUM2
MPDU1ENSG00000129255.101268.33830934.558900.440501.868201.40480K562PUS1
MPDU1ENSG00000129255.101204.49140910.443900.403704.080003.37690K562RBM15
MPDU1ENSG00000129255.10527.23610805.25340-0.611004.548103.28520K562SF3B1
MPDU1ENSG00000129255.10961.49220681.265900.497004.171803.29730K562TARDBP
MPDU1ENSG00000129255.10606.95090880.66960-0.537004.390603.07840K562UCHL5
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for MPDU1 is not available on ENCORE database.





29 RBPs can affect the splicing of MPDU1 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SEMPDU1ENSG00000129255.10chr17+749021674903357489973749009574904787490589-0.141000.000000.00000excludedHepG2U2AF1
SEMPDU1ENSG00000129255.10chr17+749021674903357489973749009574904787490589-0.358000.000000.00000excludedHepG2U2AF2
SEMPDU1ENSG00000129255.10chr17+749021674903357490009749009574904787490589-0.143000.000070.00499excludedK562SF3B1
SEMPDU1ENSG00000129255.10chr17+748997374900957489263748939674902167490361-0.052000.000640.01323excludedK562HNRNPC
A3SSMPDU1ENSG00000129255.10chr17+749000974905897490478749058974892637489396-0.065000.005330.09996shorterHepG2U2AF2
A3SSMPDU1ENSG00000129255.10chr17+7489973749009574900097490095748926874893960.096000.000140.00120longerK562AQR
RIMPDU1ENSG00000129255.10chr17+749021674905897490216749033574904787490589-0.102000.000110.01162excludedK562DROSHA
RIMPDU1ENSG00000129255.10chr17+7490009749058974900097490095749021674905890.134000.000000.00000includedHepG2U2AF2
RIMPDU1ENSG00000129255.10chr17+7490216749058974902167490335749047874905890.443000.004860.03333includedHepG2U2AF2
RIMPDU1ENSG00000129255.10chr17+7490009749058974900097490095749021674905890.061000.004860.08655includedHepG2UCHL5
RIMPDU1ENSG00000129255.10chr17+7490216749058974902167490335749047874905890.073000.000930.03467includedHepG2TIA1
RIMPDU1ENSG00000129255.10chr17+7490009749058974900097490095749021674905890.080000.000040.00116includedHepG2PRPF8
RIMPDU1ENSG00000129255.10chr17+7490216749058974902167490335749047874905890.143000.000140.00291includedHepG2PRPF8
RIMPDU1ENSG00000129255.10chr17+7490216749058974902167490335749047874905890.166000.000000.00097includedHepG2SUPV3L1
RIMPDU1ENSG00000129255.10chr17+749021674905897490216749033574904787490589-0.096000.001560.05012excludedK562HNRNPUL1
RIMPDU1ENSG00000129255.10chr17+7490009749058974900097490095749021674905890.104000.000000.00015includedK562PRPF8
RIMPDU1ENSG00000129255.10chr17+7490009749058974900097490095749021674905890.058000.000000.00026includedHepG2FTO
RIMPDU1ENSG00000129255.10chr17+7490216749058974902167490335749047874905890.067000.000730.01248includedHepG2PCBP1
RIMPDU1ENSG00000129255.10chr17+7490216749058974902167490335749047874905890.053000.005740.05632includedHepG2QKI
RIMPDU1ENSG00000129255.10chr17+7490216749058974902167490335749047874905890.063000.003970.03621includedHepG2TAF15
RIMPDU1ENSG00000129255.10chr17+7490009749058974900097490095749021674905890.083000.000000.00000includedHepG2U2AF1
RIMPDU1ENSG00000129255.10chr17+7490216749058974902167490335749047874905890.151000.000000.00004includedHepG2U2AF1
RIMPDU1ENSG00000129255.10chr17+7490216749058974902167490335749047874905890.059000.005080.08180includedHepG2KHSRP
RIMPDU1ENSG00000129255.10chr17+7490009749058974900097490095749021674905890.161000.000020.00045includedK562U2AF2
RIMPDU1ENSG00000129255.10chr17+7490216749058974902167490335749047874905890.197000.000000.00006includedHepG2TIAL1
RIMPDU1ENSG00000129255.10chr17+749021674905897490216749033574904787490589-0.099000.002200.08684excludedK562SBDS
RIMPDU1ENSG00000129255.10chr17+7490009749058974900097490095749021674905890.053000.000000.00001includedHepG2SF3B4
RIMPDU1ENSG00000129255.10chr17+7490216749058974902167490335749047874905890.070000.000570.00584includedHepG2SF3B4
RIMPDU1ENSG00000129255.10chr17+7490216749058974902167490335749047874905890.091000.000100.00183includedHepG2RBM22
RIMPDU1ENSG00000129255.10chr17+7490009749058974900097490095749021674905890.057000.000000.00009includedHepG2SRSF9
RIMPDU1ENSG00000129255.10chr17+7490216749058974902167490335749047874905890.065000.005830.07309includedHepG2SRSF9
RIMPDU1ENSG00000129255.10chr17+7490009749058974900097490095749021674905890.100000.000000.00010includedK562EFTUD2
RIMPDU1ENSG00000129255.10chr17+7490216749058974902167490335749047874905890.147000.000170.00286includedK562EFTUD2
RIMPDU1ENSG00000129255.10chr17+749021674905897490216749033574904787490589-0.252000.001360.08565excludedK562FMR1
RIMPDU1ENSG00000129255.10chr17+749021674905897490216749033574904787490589-0.262000.000990.07888excludedK562METAP2
RIMPDU1ENSG00000129255.10chr17+7490009749058974900097490095749021674905890.213000.000000.00000includedK562AQR
RIMPDU1ENSG00000129255.10chr17+7490216749058974902167490335749047874905890.106000.000160.00123includedK562AQR
RIMPDU1ENSG00000129255.10chr17+7490216749058974902167490335749047874905890.056000.002030.07921includedHepG2LARP4
MXEMPDU1ENSG00000129255.10chr17+748926374893967490216749033574871777487283749047874905890.071000.001510.029251includedHepG2U2AF1
MXEMPDU1ENSG00000129255.10chr17+74900097490156749021674903357489263748939674904787490589-0.155000.000150.004562includedK562DROSHA
MXEMPDU1ENSG00000129255.10chr17+749000974901567490216749033574892637489396749047874905890.124000.003830.097131includedHepG2TAF15
MXEMPDU1ENSG00000129255.10chr17+74890497489115748926374893967487169748728374900097490095-0.112000.002340.074902includedHepG2BCCIP
MXEMPDU1ENSG00000129255.10chr17+74892637489396748997374900957489049748911574902167490335-0.099000.001700.061792includedHepG2BCCIP
MXEMPDU1ENSG00000129255.10chr17+74892637489396749000974900957489049748911574902167490335-0.095000.001690.061762includedHepG2BCCIP
MXEMPDU1ENSG00000129255.10chr17+748926374893967490009749009574890497489115749021674903350.056000.001790.023681includedHepG2SFPQ
MXEMPDU1ENSG00000129255.10chr17+74900097490156749021674903357489263748939674904787490589-0.123000.000040.001042includedHepG2SFPQ
MXEMPDU1ENSG00000129255.10chr17+74892637489396749000974900957489049748911574902167490335-0.090000.004050.079232includedHepG2XRN2
MXEMPDU1ENSG00000129255.10chr17+74900097490095749021674903117489263748939674904787490576-0.055000.000050.001792includedK562HNRNPC
MXEMPDU1ENSG00000129255.10chr17+74900097490156749021674903357489263748939674904787490589-0.137000.001070.021832includedK562HNRNPC
MXEMPDU1ENSG00000129255.10chr17+749000974901567490216749033574892637489396749047874905890.141000.001890.057161includedK562TAF15
MXEMPDU1ENSG00000129255.10chr17+749000974901567490216749033574892637489396749047874905890.215000.000000.000121includedK562DDX55
MXEMPDU1ENSG00000129255.10chr17+748904974891157489268748939674871387487283749000974900950.113000.007130.096961includedK562PRPF8
MXEMPDU1ENSG00000129255.10chr17+74900097490156749021674903357489263748939674904787490589-0.137000.001000.023322includedK562HNRNPUL1

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for MPDU1 is not avaliable on ENCORE database.