INTS9

General Information

Gene Name       : INTS9
Gene ID             : ENSG00000104299.14
Essential Gene : Yes

Functions

Localization

Domains (AlphaFold: INTS9)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878INTS9ENSG00000104299.1422.4425.2123.83ENCSR000AEF
HepG2INTS9ENSG00000104299.1415.0513.8714.46ENCSR985KAT
K562INTS9ENSG00000104299.1440.7841.3541.06ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for INTS9 is not avaliable on ENCORE database.



Proteins bound to RNA
  • INTS9 RNA is bound by 5 proteins.  







eCLIP assay for INTS9 is not avaliable on ENCORE database.





5 proteins are bound to INTS9 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr82865142128651484-3'-UTR,CDS,intron-Distal3.226723.07411K562LIN28B
chr82869519028695256-5'-UTR,CDS,intron-Distal,intron-Proximal3.004653.38585K562YBX3
chr82865776728657889-intron-Distal4.4758910.61789HepG2RBFOX2
chr82865775628657872-intron-Distal3.017006.01296K562RBFOX2
chr82862735228627371-intron-Distal,intron-Proximal4.860594.65563K562AQR
chr82862737128627406-intron-Distal,intron-Proximal5.012856.22530K562AQR
chr82862845128628499-intron-Distal,intron-Proximal4.929354.65563K562AQR
chr82866438128664507-intron-Distal3.381264.10408K562KHSRP
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for INTS9 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for INTS9 is not available on ENCORE database.

  • 84 RBPs can affect the levels of INTS9.  








The Knockdown/knockout RNA-Seq assay for INTS9 is not available on ENCORE database.





84 RBPs can affect the gene expression of INTS9 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
INTS9ENSG00000104299.10246.10760343.71990-0.481902.259901.31250HepG2AKAP8
INTS9ENSG00000104299.10393.59900536.48770-0.446803.717702.94330HepG2AUH
INTS9ENSG00000104299.10459.46260307.719800.578203.558402.68930HepG2CIRBP
INTS9ENSG00000104299.10214.94310322.14670-0.583802.654102.04950HepG2DDX6
INTS9ENSG00000104299.10212.59130309.64660-0.542502.505901.94060HepG2EIF2S1
INTS9ENSG00000104299.10233.40600457.98530-0.972508.717107.30260HepG2EIF4G2
INTS9ENSG00000104299.10364.47960615.98070-0.757009.218408.22720HepG2ETF1
INTS9ENSG00000104299.10123.78000193.09320-0.641502.955301.74350HepG2FAM120A
INTS9ENSG00000104299.10316.28990192.363900.717304.263503.13940HepG2GEMIN5
INTS9ENSG00000104299.10313.52130441.37030-0.493403.821803.03760HepG2HNRNPL
INTS9ENSG00000104299.10266.62070348.13550-0.384902.289501.73250HepG2HNRNPU
INTS9ENSG00000104299.10274.89970355.61040-0.371402.470701.77390HepG2ILF2
INTS9ENSG00000104299.10175.11660290.29000-0.729203.729902.86350HepG2NSUN2
INTS9ENSG00000104299.10120.31570202.99270-0.754602.711201.83290HepG2PABPC1
INTS9ENSG00000104299.10405.08760315.560800.360202.244401.68750HepG2PCBP1
INTS9ENSG00000104299.10316.65030458.68870-0.534603.402602.75060HepG2PUF60
INTS9ENSG00000104299.10313.66720486.57180-0.633404.982504.09640HepG2PUM2
INTS9ENSG00000104299.10392.72100301.064500.383302.452101.86280HepG2PUS1
INTS9ENSG00000104299.10204.01640317.11090-0.636302.250801.61010HepG2RAVER1
INTS9ENSG00000104299.10305.85920438.09390-0.518403.590802.62720HepG2RBM15
INTS9ENSG00000104299.10312.36870486.47500-0.639104.892204.01770HepG2RPLP0
INTS9ENSG00000104299.10191.17980311.59220-0.704703.213902.19710HepG2RPS10
INTS9ENSG00000104299.10335.70840439.86070-0.389802.512501.83960HepG2SLBP
INTS9ENSG00000104299.10281.65350452.91730-0.685306.255905.36850HepG2SRSF5
INTS9ENSG00000104299.10344.85500443.64780-0.363402.599901.92350HepG2SRSF7
INTS9ENSG00000104299.10232.17360313.66780-0.434002.229501.71740HepG2TAF15
INTS9ENSG00000104299.10212.31880319.10050-0.587803.106002.34380HepG2TARDBP
INTS9ENSG00000104299.10333.80420448.15900-0.425002.319001.52520HepG2TUFM
INTS9ENSG00000104299.10261.78340474.39530-0.857704.875203.74460HepG2UBE2L3
INTS9ENSG00000104299.10291.74810440.54600-0.594605.554004.65420HepG2ZC3H8
INTS9ENSG00000104299.101478.697001871.42350-0.339802.772701.55030K562ABCF1
INTS9ENSG00000104299.101268.312401533.95410-0.274303.079902.48580K562AGGF1
INTS9ENSG00000104299.101330.154401685.50010-0.341602.989601.95600K562AKAP8
INTS9ENSG00000104299.101154.154001596.12820-0.467704.944704.06180K562AKAP8L
INTS9ENSG00000104299.10587.407201494.74450-1.3475027.2631025.61860K562AQR
INTS9ENSG00000104299.10716.84040968.86240-0.434605.420604.05940K562BCLAF1
INTS9ENSG00000104299.10523.79810992.45930-0.9220011.711209.88140K562BOP1
INTS9ENSG00000104299.10880.203301144.55580-0.378903.639801.88530K562CEBPZ
INTS9ENSG00000104299.101338.696101792.82730-0.421403.086501.55020K562CKAP4
INTS9ENSG00000104299.10580.233501055.24280-0.8629013.5393011.78380K562CPSF6
INTS9ENSG00000104299.101820.095102562.88280-0.493807.430305.85380K562CELF1
INTS9ENSG00000104299.101066.897901315.52500-0.302203.029601.76190K562DDX21
INTS9ENSG00000104299.10551.91170703.69650-0.350502.454401.47580K562DDX3X
INTS9ENSG00000104299.101196.972401727.37560-0.529209.973308.82640K562DDX47
INTS9ENSG00000104299.10599.54390881.43060-0.556005.041503.22160K562DNAJC21
INTS9ENSG00000104299.10689.44020947.82700-0.459203.468102.44100K562EFTUD2
INTS9ENSG00000104299.10950.920801340.14170-0.495007.195706.11540K562EIF2S2
INTS9ENSG00000104299.10490.73250833.75430-0.764704.832603.46280K562EIF3A
INTS9ENSG00000104299.101466.624302084.37850-0.507108.413206.80110K562EIF4G2
INTS9ENSG00000104299.10980.587301430.30260-0.544603.725201.79010K562ESF1
INTS9ENSG00000104299.10517.46170843.62850-0.705205.643003.25700K562FAM120A
INTS9ENSG00000104299.10677.86780892.11850-0.396202.505501.43990K562FKBP4
INTS9ENSG00000104299.10597.242301073.73520-0.8462011.082209.31250K562FMR1
INTS9ENSG00000104299.10434.70330910.10950-1.0660013.8659011.68850K562FTO
INTS9ENSG00000104299.10534.31470700.65480-0.391001.929501.35060K562G3BP2
INTS9ENSG00000104299.101025.692201344.91640-0.390904.486503.03840K562GLRX3
INTS9ENSG00000104299.10532.667001007.47620-0.9194013.1572011.40310K562GPKOW
INTS9ENSG00000104299.101143.158101785.86000-0.643609.322807.91240K562GRSF1
INTS9ENSG00000104299.10777.767001229.68900-0.660906.810105.17880K562HNRNPA1
INTS9ENSG00000104299.10532.505201027.79900-0.9487014.5517013.26860K562HNRNPC
INTS9ENSG00000104299.101043.507201361.90030-0.384202.985802.05850K562HNRNPU
INTS9ENSG00000104299.101397.361901823.84680-0.384303.505002.61220K562HSPD1
INTS9ENSG00000104299.10811.584401352.26380-0.736604.320602.52290K562ILF2
INTS9ENSG00000104299.10637.36080856.33670-0.426102.925001.38700K562ILF3
INTS9ENSG00000104299.10608.16780827.63790-0.444503.248901.63550K562KHDRBS1
INTS9ENSG00000104299.101239.828701693.96300-0.450304.812203.66790K562KIF1C
INTS9ENSG00000104299.10439.36270860.31400-0.969508.904607.11650K562KRR1
INTS9ENSG00000104299.10597.56700983.41800-0.718708.711507.09320K562METAP2
INTS9ENSG00000104299.101012.771401414.01190-0.481507.952406.64690K562MTPAP
INTS9ENSG00000104299.101106.831401571.05140-0.5053011.309609.94300K562NSUN2
INTS9ENSG00000104299.101176.702901527.06020-0.376003.084602.21230K562PPIG
INTS9ENSG00000104299.10694.08510922.34190-0.410202.706701.96490K562PRPF8
INTS9ENSG00000104299.101856.800902274.21650-0.292602.307501.56290K562PUF60
INTS9ENSG00000104299.101846.190902418.97100-0.389805.052603.57650K562PUM1
INTS9ENSG00000104299.101855.252602370.12800-0.353304.779303.50620K562PUM2
INTS9ENSG00000104299.101108.840801583.06840-0.513705.003004.29990K562PUS1
INTS9ENSG00000104299.101079.247401542.33970-0.515107.520606.57250K562RBM15
INTS9ENSG00000104299.101140.48620840.686500.439904.260503.02640K562RCC2
INTS9ENSG00000104299.10632.63550939.58960-0.570704.089003.09360K562RPS19
INTS9ENSG00000104299.10643.34780943.14380-0.551903.327901.86590K562RRP9
INTS9ENSG00000104299.101159.239001550.29040-0.419404.074103.09530K562SF3A3
INTS9ENSG00000104299.10485.83500958.22200-0.9799010.987408.96220K562SF3B1
INTS9ENSG00000104299.10522.98110728.45830-0.478104.505303.40490K562SF3B4
INTS9ENSG00000104299.10606.15520902.83370-0.574805.364203.57210K562SLBP
INTS9ENSG00000104299.10943.531501173.97820-0.315303.211301.94480K562SRSF7
INTS9ENSG00000104299.101231.720801614.36300-0.390302.683701.45830K562STAU1
INTS9ENSG00000104299.10584.51600893.17020-0.611704.794903.42680K562SUPV3L1
INTS9ENSG00000104299.10413.76010679.05040-0.714705.804604.10080K562U2AF1
INTS9ENSG00000104299.10354.03530701.34780-0.9862014.7206012.84280K562U2AF2
INTS9ENSG00000104299.102044.424702564.11500-0.326803.353301.79160K562UBE2L3
INTS9ENSG00000104299.10719.57960945.23870-0.393502.569901.59330K562UCHL5
INTS9ENSG00000104299.101085.675401665.82250-0.6176013.8347012.37690K562UPF1
INTS9ENSG00000104299.101191.377301749.61240-0.554405.216503.56480K562UTP3
INTS9ENSG00000104299.10946.020901425.38620-0.591407.841306.32170K562WDR3
INTS9ENSG00000104299.101048.310101482.27420-0.499709.434107.97010K562WDR43
INTS9ENSG00000104299.101421.167001771.02820-0.317502.806001.50310K562WRN
INTS9ENSG00000104299.10737.52240962.40370-0.384002.487901.36070K562XRN2
INTS9ENSG00000104299.101032.174001683.86390-0.7061010.357808.56780K562ZC3H8
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for INTS9 is not available on ENCORE database.





21 RBPs can affect the splicing of INTS9 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SEINTS9ENSG00000104299.10chr8-2863807028638211286353452863547028638339286385110.102000.000030.00172includedK562AKAP8L
SEINTS9ENSG00000104299.10chr8-286453452864540628638339286385112865132328651504-0.102000.000040.00248excludedK562AKAP8L
SEINTS9ENSG00000104299.10chr8-287042632870432628695153286952932870772928707790-0.354000.004560.08921excludedHepG2HNRNPK
SEINTS9ENSG00000104299.10chr8-2871955628719729287169522871708028747390287474510.061000.004360.04766includedHepG2U2AF2
SEINTS9ENSG00000104299.10chr8-286698432866997828654084286541722867100828671129-0.067000.008810.07336excludedK562AQR
SEINTS9ENSG00000104299.10chr8-286380702863821128635345286354702863833928638511-0.057000.002100.06895excludedK562FXR1
SEINTS9ENSG00000104299.10chr8-2871955628719729287169522871708028747390287474510.159000.000580.09703includedHepG2UCHL5
SEINTS9ENSG00000104299.10chr8-2863807028638211286353452863547028638339286385110.177000.000000.00000includedK562PUS1
SEINTS9ENSG00000104299.10chr8-286453452864540628638339286385112865132328651504-0.140000.000000.00016excludedK562PUS1
SEINTS9ENSG00000104299.10chr8-2871955628719729287169522871708028747390287474510.127000.000010.00185includedHepG2SFPQ
SEINTS9ENSG00000104299.10chr8-2870426328704326286951532869529328707729287077900.340000.001980.08630includedHepG2PTBP1
SEINTS9ENSG00000104299.10chr8-287042632870432628695153286952932870772928707790-0.281000.000200.05013excludedK562GPKOW
SEINTS9ENSG00000104299.10chr8-2870426328704326286951532869529328707729287077900.533000.000200.01911includedHepG2FTO
SEINTS9ENSG00000104299.10chr8-287042632870432628695153286952932870772928707790-0.329000.000010.00190excludedK562EFTUD2
SEINTS9ENSG00000104299.10chr8-287169522871708028707729287077902874739028747444-0.062000.000290.00813excludedK562U2AF1
SEINTS9ENSG00000104299.10chr8-2870426328704326286951532869529328707729287077900.381000.000620.01735includedHepG2SRSF1
SEINTS9ENSG00000104299.10chr8-2871955628719729287169522871708028747390287474510.063000.000100.01139includedHepG2TIAL1
SEINTS9ENSG00000104299.10chr8-2863807028638211286353452863547028638339286385110.062000.002390.06495includedK562UTP18
SEINTS9ENSG00000104299.10chr8-286453452864540628638339286385112865132328651504-0.115000.000180.00928excludedK562UTP18
SEINTS9ENSG00000104299.10chr8-287169522871708028707729287077902874739028747444-0.076000.000140.00376excludedK562U2AF2
SEINTS9ENSG00000104299.10chr8-2863807028638211286353452863547028638339286385110.087000.000040.00207includedK562AGGF1
SEINTS9ENSG00000104299.10chr8-287042632870432628695153286952932870772928707790-0.384000.000000.00932excludedK562DDX55
SEINTS9ENSG00000104299.10chr8-2870426328704326286951532869529328707729287077900.155000.002960.09040includedK562PTBP1
A3SSINTS9ENSG00000104299.10chr8-2863534528635545286353452863547028638339286385110.077000.001100.00759longerK562AQR
A3SSINTS9ENSG00000104299.10chr8-2862849828628682286284982862859728633275286334430.082000.000520.00384longerK562AQR
MXEINTS9ENSG00000104299.10chr8-2867105928671129286928082869289528669843286699782869515328695293-0.060000.008480.055362includedK562AQR
MXEINTS9ENSG00000104299.10chr8-2869515328695293287042632870432628671008286711292870772928707790-0.320000.000030.001902includedK562EFTUD2
MXEINTS9ENSG00000104299.10chr8-2867100828671129286928082869289528669843286699782869515328695293-0.352000.002170.015622includedHepG2U2AF2
MXEINTS9ENSG00000104299.10chr8-2866984328669978286710082867112928654060286541722869280828692895-0.468000.000850.016812includedHepG2HNRNPUL1
MXEINTS9ENSG00000104299.10chr8-2866984328669978286710082867112928654060286541722869280828692895-0.263000.002970.062672includedK562SBDS
MXEINTS9ENSG00000104299.10chr8-2867100828671129286928082869289528669843286699782869515328695293-0.485000.000030.002352includedK562FXR2

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for INTS9 is not avaliable on ENCORE database.