IFIH1

General Information

Gene Name       : IFIH1
Gene ID             : ENSG00000115267.6
Essential Gene : No

Functions

Localization

Domains (AlphaFold: IFIH1)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878IFIH1ENSG00000115267.633.0327.8630.45ENCSR000AEF
HepG2IFIH1ENSG00000115267.63.165.784.47ENCSR985KAT
K562IFIH1ENSG00000115267.60.390.840.61ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  
  GeneName    Antibody_DCC_ID    Product_ID    Lot_ID    Phosphate    HepG2 Primary Validation    K562 Primary Validation    HepG2 Secondary Validation    K562 Secondary Validation  
IFIH1ENCAB361XUZ700360UA2700357NotSatisfied, ENCODE4


  KD RNA-Seq  
  GeneName    Cell_Line    Method    Exp_ID    Control_ID    Sample_reps    Control_reps    KD%    Status    Project    Note  
IFIH1K562CRISPRBGKcLV17-29,BGKcLV17-30BGKcLV17-1,BGKcLV17-20.0,20.0NotSatisfiedENCODE4
IFIH1K562CRISPRBGKcLV19-15,BGKcLV19-16BGKcLV19-1,BGKcLV19-2NO CLEAR BAND ON THE POSION,NotSatisfiedENCODE4
IFIH1K562CRISPRBGKcLV19-17,BGKcLV19-18BGKcLV19-1,BGKcLV19-2NO CLEAR BAND ON THE POSION,NotSatisfiedENCODE4
IFIH1HepG2CRISPRBGHcLV20-9,BGHcLV20-10BGHcLV20-1,BGHcLV20-2NotSatisfiedENCODE4


  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela
IFIH1Product_ID: 700360
Lot_ID: UA2700357
Source: Thermo Fisher
Target Name: IFIH1-human		 ThermoFisher_700360_UA2700357_MDA5.png<br>Caption: IP-WB analysis of K562 whole cell lysate using the MDA5 specific antibody, 700360. Lane 1 is 2.5% of five million whole cell lysate input. Lanes 2 and 3 are 50% of IP enrichment from five million whole cell lysate using normal IgG antibody and the MDA5-specific antibody, 700360. The same antibody was used to detect protein levels via Western blot. This antibody passes preliminary validation and will be further pursued for secondary validation. *NOTE* Protein sizes are taken from Genecards.org and are only estimates based on sequence. Actual protein size may differ based on protein characteristics and electrophoresis method used.








RNA Targets

  • eCLIP assay for IFIH1 is not avaliable on ENCORE database.



Proteins bound to RNA

  • NO known proteins bind on IFIH1 RNA with finished eCLIP experiments on ENCORE database.





eCLIP assay for IFIH1 is not avaliable on ENCORE database.






NO known proteins are bound to IFIH1 RNA with finished eCLIP experiments on ENCORE database.





eCLIP assay for IFIH1 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for IFIH1 is not available on ENCORE database.

  • 88 RBPs can affect the levels of IFIH1.  








The Knockdown/knockout RNA-Seq assay for IFIH1 is not available on ENCORE database.





88 RBPs can affect the gene expression of IFIH1 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
IFIH1ENSG00000115267.5467.70120216.758901.109408.537107.01400HepG2ABCF1
IFIH1ENSG00000115267.5265.33680143.282300.888905.615504.26360HepG2ADAR
IFIH1ENSG00000115267.5211.32290379.17450-0.843404.635003.96950HepG2AKAP1
IFIH1ENSG00000115267.5329.41890224.779600.551303.754202.87410HepG2AKAP8L
IFIH1ENSG00000115267.5692.94030312.777401.147508.340006.64090HepG2CCAR1
IFIH1ENSG00000115267.5712.66310298.081501.2574016.5360014.83780HepG2CIRBP
IFIH1ENSG00000115267.5355.84230223.688400.669605.747804.85240HepG2CKAP4
IFIH1ENSG00000115267.5173.27870106.486200.702302.826501.74050HepG2CSTF2
IFIH1ENSG00000115267.5337.72210206.901700.706806.231505.05280HepG2DDX19B
IFIH1ENSG00000115267.5617.96070196.908701.6499026.2271024.44710HepG2DDX21
IFIH1ENSG00000115267.5359.23700192.571900.899407.130005.67440HepG2DDX24
IFIH1ENSG00000115267.5286.35310158.603200.852303.816702.33440HepG2DDX27
IFIH1ENSG00000115267.5128.05210311.95460-1.284605.535604.68830HepG2DDX6
IFIH1ENSG00000115267.5524.32550214.021201.2926020.0340018.60100HepG2DKC1
IFIH1ENSG00000115267.5259.09930165.608900.645602.739901.82330HepG2EEF2
IFIH1ENSG00000115267.5305.39570185.869500.716304.595103.24420HepG2EIF3G
IFIH1ENSG00000115267.5490.23030331.560400.564102.980302.31650HepG2EIF4A3
IFIH1ENSG00000115267.5124.01290322.73500-1.379909.198907.98500HepG2EIF4B
IFIH1ENSG00000115267.5462.03070265.719400.798007.654706.39120HepG2EIF4G1
IFIH1ENSG00000115267.5328.61690187.756900.807405.023903.59430HepG2ESF1
IFIH1ENSG00000115267.5476.27110329.299900.532303.178402.22200HepG2G3BP2
IFIH1ENSG00000115267.5187.83950119.680500.650202.678401.79650HepG2GEMIN5
IFIH1ENSG00000115267.5531.66280222.340101.2576012.7063011.42940HepG2GPKOW
IFIH1ENSG00000115267.5306.16960145.656401.071707.858406.85290HepG2HNRNPA1
IFIH1ENSG00000115267.5229.72490162.019000.503601.895601.31020HepG2HNRNPC
IFIH1ENSG00000115267.5282.03850198.840900.504202.904402.17090HepG2HNRNPF
IFIH1ENSG00000115267.5227.98950314.01160-0.461901.985601.38670HepG2HNRNPK
IFIH1ENSG00000115267.5299.78810195.801600.614503.711002.88320HepG2IGF2BP1
IFIH1ENSG00000115267.5421.63120315.409700.418702.081801.48700HepG2IGF2BP2
IFIH1ENSG00000115267.5235.75680145.629700.694902.630801.35260HepG2ILF3
IFIH1ENSG00000115267.5363.45890216.406100.748003.387702.30750HepG2MTPAP
IFIH1ENSG00000115267.5377.02320188.143401.002707.686106.48170HepG2NSUN2
IFIH1ENSG00000115267.5389.58740224.934600.792304.494903.19240HepG2PCBP2
IFIH1ENSG00000115267.5197.80540143.551900.462401.946201.31940HepG2PPIL4
IFIH1ENSG00000115267.5295.34630193.926800.606804.096003.17460HepG2PRPF4
IFIH1ENSG00000115267.5415.45020236.463000.813004.552803.01620HepG2PRPF6
IFIH1ENSG00000115267.5397.99010130.750301.6058015.6571013.96020HepG2PRPF8
IFIH1ENSG00000115267.5473.66570254.997200.893307.882506.94430HepG2PUF60
IFIH1ENSG00000115267.5319.76240227.847600.488803.151902.50370HepG2PUS1
IFIH1ENSG00000115267.5344.95230214.198900.687304.332903.50740HepG2RPLP0
IFIH1ENSG00000115267.5340.60030213.223700.675603.178202.16820HepG2RPS10
IFIH1ENSG00000115267.5377.95180149.879901.3343010.682409.15630HepG2RPS3A
IFIH1ENSG00000115267.5220.36320129.337200.768603.100902.27570HepG2RRP9
IFIH1ENSG00000115267.5247.75110142.465600.798203.402001.68370HepG2SBDS
IFIH1ENSG00000115267.5219.90060131.267300.744203.546602.47910HepG2SERBP1
IFIH1ENSG00000115267.5498.76550335.803700.570605.463104.82430HepG2SRFBP1
IFIH1ENSG00000115267.5540.20840352.292000.616605.621405.00700HepG2SRSF1
IFIH1ENSG00000115267.5357.34670225.985000.661003.279902.17980HepG2SRSF3
IFIH1ENSG00000115267.5185.54360286.59940-0.627304.346903.68450HepG2SRSF9
IFIH1ENSG00000115267.5810.31440291.559401.4746033.4938032.16370HepG2SSB
IFIH1ENSG00000115267.5200.48770130.327900.621302.506601.46820HepG2STIP1
IFIH1ENSG00000115267.5252.71640168.747000.582602.098101.49830HepG2SUPV3L1
IFIH1ENSG00000115267.5302.32790156.378500.951007.647406.89180HepG2TIAL1
IFIH1ENSG00000115267.5147.30870308.39490-1.065902.701001.72540HepG2U2AF2
IFIH1ENSG00000115267.5428.51200283.890200.593904.882203.52860HepG2UTP18
IFIH1ENSG00000115267.5291.10210166.113000.809304.042903.17430HepG2XRN2
IFIH1ENSG00000115267.5149.32690303.75230-1.0244010.292309.40540HepG2ZNF622
IFIH1ENSG00000115267.5137.0064056.158601.286605.517503.78110K562ABCF1
IFIH1ENSG00000115267.5171.3296052.082001.717809.514708.53030K562AQR
IFIH1ENSG00000115267.5114.5940034.373301.737107.159005.73360K562BOP1
IFIH1ENSG00000115267.591.2991046.480100.973902.901601.35750K562CEBPZ
IFIH1ENSG00000115267.5134.9726037.953201.830307.826605.98930K562CNOT7
IFIH1ENSG00000115267.599.3178036.541201.442405.323204.24270K562CPSF6
IFIH1ENSG00000115267.5186.5621096.994600.943603.344602.27090K562CELF1
IFIH1ENSG00000115267.5105.5305055.596500.924503.223402.52860K562DDX47
IFIH1ENSG00000115267.5100.3292041.574901.270904.347902.25340K562DDX51
IFIH1ENSG00000115267.559.3386026.786101.147402.754202.03630K562EIF2S2
IFIH1ENSG00000115267.533.2989064.53280-0.954602.473601.40190K562EIF4B
IFIH1ENSG00000115267.5141.2115078.815500.841202.773801.83550K562EIF4G2
IFIH1ENSG00000115267.585.9814037.194301.208803.517002.54960K562FMR1
IFIH1ENSG00000115267.598.2347031.531901.639306.295304.85950K562FTO
IFIH1ENSG00000115267.580.9047037.580401.106102.825401.67260K562GLRX3
IFIH1ENSG00000115267.5130.3231034.881801.901408.630707.22180K562GPKOW
IFIH1ENSG00000115267.5147.7884035.699402.0495010.610909.10160K562GRSF1
IFIH1ENSG00000115267.584.8675045.977800.884202.576501.53930K562HNRNPA1
IFIH1ENSG00000115267.5115.4850039.181601.559406.528605.65070K562HNRNPC
IFIH1ENSG00000115267.511.5737033.19240-1.520002.153001.33690K562HNRNPM
IFIH1ENSG00000115267.5102.4218034.674301.562504.911502.98600K562ILF2
IFIH1ENSG00000115267.5105.1989029.800501.819606.577705.07020K562KRR1
IFIH1ENSG00000115267.588.0080052.719200.739202.119601.32200K562MATR3
IFIH1ENSG00000115267.5146.0246083.995700.797702.334501.30240K562MSI2
IFIH1ENSG00000115267.5110.0300039.511401.477506.665705.46080K562MTPAP
IFIH1ENSG00000115267.595.1109043.897801.115403.862702.99760K562NSUN2
IFIH1ENSG00000115267.5113.6728036.462201.640306.219604.35970K562PABPC1
IFIH1ENSG00000115267.5166.0913046.992001.8214010.318908.71890K562PCBP3
IFIH1ENSG00000115267.5122.5226036.047601.765009.127407.70570K562POLR2G
IFIH1ENSG00000115267.5103.1392033.781501.610205.465102.87710K562PPIL4
IFIH1ENSG00000115267.5401.0653085.982502.2216026.1551023.58940K562PUF60
IFIH1ENSG00000115267.5188.5590089.605401.073303.789502.66270K562PUM2
IFIH1ENSG00000115267.565.2967032.042301.026902.487601.55200K562RCC2
IFIH1ENSG00000115267.5112.2144038.124001.557405.772204.58740K562RPS19
IFIH1ENSG00000115267.592.0610033.870201.442504.330802.32290K562RPS3A
IFIH1ENSG00000115267.585.3883038.267001.157802.872901.51940K562RRP9
IFIH1ENSG00000115267.5102.5540034.576101.568405.095202.91260K562SBDS
IFIH1ENSG00000115267.585.1013033.195801.358103.216902.16600K562SF3B1
IFIH1ENSG00000115267.588.2416047.693000.887602.544401.42560K562SRSF7
IFIH1ENSG00000115267.5120.7526033.841401.835106.365003.94040K562STIP1
IFIH1ENSG00000115267.575.0917038.353300.969202.257201.34660K562UCHL5
IFIH1ENSG00000115267.5142.8382037.122101.9439011.156608.94860K562UTP3
IFIH1ENSG00000115267.5111.8980039.827501.490206.868905.45160K562WDR3
IFIH1ENSG00000115267.5164.0264058.656801.483504.747403.57110K562ZC3H8
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for IFIH1 is not available on ENCORE database.






No RBPs affect the alternative splcing events of IFIH1 on ENCORE database.





The Knockdown/knockout RNA-Seq assay for IFIH1 is not avaliable on ENCORE database.