HIRIP3

General Information

Gene Name       : HIRIP3
Gene ID             : ENSG00000149929.15
Essential Gene : No

Functions

Localization

Domains (AlphaFold: HIRIP3)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878HIRIP3ENSG00000149929.159.3714.4311.90ENCSR000AEF
HepG2HIRIP3ENSG00000149929.1521.3912.2716.83ENCSR985KAT
K562HIRIP3ENSG00000149929.1520.8316.9018.86ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for HIRIP3 is not avaliable on ENCORE database.



Proteins bound to RNA
  • HIRIP3 RNA is bound by 5 proteins.  







eCLIP assay for HIRIP3 is not avaliable on ENCORE database.





5 proteins are bound to HIRIP3 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr163000444830004537-3'-UTR,CDS,intron-Distal7.5294418.50862K562PUM2
chr163000719230007304-5'-UTR,intron-Distal5.260204.57565HepG2DDX3X
chr163000536230005519-CDS,intron-Distal4.289333.71613K562UCHL5
chr163000671430006781-CDS,intron-Distal4.237854.12025K562YBX3
chr163000654630006646-intron-Distal,intron-Proximal6.030599.35430HepG2EFTUD2
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for HIRIP3 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for HIRIP3 is not available on ENCORE database.

  • 82 RBPs can affect the levels of HIRIP3.  








The Knockdown/knockout RNA-Seq assay for HIRIP3 is not available on ENCORE database.





82 RBPs can affect the gene expression of HIRIP3 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
HIRIP3ENSG00000149929.11273.11030570.49310-1.0627017.8669016.60840HepG2ACO1
HIRIP3ENSG00000149929.11546.71920770.56280-0.495105.771504.84200HepG2AUH
HIRIP3ENSG00000149929.11312.16510448.29190-0.522102.833001.92380HepG2BCLAF1
HIRIP3ENSG00000149929.11472.36230693.79560-0.554604.474203.73460HepG2BOP1
HIRIP3ENSG00000149929.11350.90610541.32610-0.625405.317204.29100HepG2CALR
HIRIP3ENSG00000149929.11416.55810570.36360-0.453404.413003.61120HepG2CKAP4
HIRIP3ENSG00000149929.11299.20330636.94200-1.0900012.3601011.02280HepG2CPSF6
HIRIP3ENSG00000149929.11372.08100508.78210-0.451402.917202.22250HepG2DDX21
HIRIP3ENSG00000149929.11228.55150582.54330-1.3498011.5938010.39340HepG2DDX3X
HIRIP3ENSG00000149929.11282.99990507.29670-0.842006.288105.17900HepG2DDX55
HIRIP3ENSG00000149929.11442.49690723.29450-0.708903.686902.56080HepG2DDX59
HIRIP3ENSG00000149929.11352.11710480.82180-0.449402.472201.42400HepG2EFTUD2
HIRIP3ENSG00000149929.11312.58480468.28560-0.583103.270102.05660HepG2AGO1
HIRIP3ENSG00000149929.11291.16860481.05660-0.724405.123904.33160HepG2EIF2S1
HIRIP3ENSG00000149929.11252.87690468.18860-0.888706.864405.49380HepG2EIF3D
HIRIP3ENSG00000149929.11720.51260531.529600.438802.482801.87620HepG2EIF4A3
HIRIP3ENSG00000149929.11222.25000517.69910-1.219909.703108.45430HepG2EIF4B
HIRIP3ENSG00000149929.11527.01910735.04170-0.480004.637903.59570HepG2EIF4G1
HIRIP3ENSG00000149929.11584.64310834.12140-0.512703.306902.47240HepG2FIP1L1
HIRIP3ENSG00000149929.11775.84340536.577100.531903.805003.00380HepG2FXR1
HIRIP3ENSG00000149929.11240.88040416.87020-0.791305.701604.41330HepG2GEMIN5
HIRIP3ENSG00000149929.11297.17470408.62870-0.459502.043401.47800HepG2HNRNPA1
HIRIP3ENSG00000149929.11428.58550684.69690-0.675905.915104.63530HepG2HNRNPA2B1
HIRIP3ENSG00000149929.11409.85670544.63220-0.410203.399302.61040HepG2HNRNPF
HIRIP3ENSG00000149929.11709.19730504.219900.492003.430202.65500HepG2HNRNPK
HIRIP3ENSG00000149929.11494.07960689.03970-0.479803.148802.48270HepG2HNRNPLL
HIRIP3ENSG00000149929.11438.93870575.50230-0.390802.537701.62550HepG2HNRNPM
HIRIP3ENSG00000149929.11586.18470451.547400.376402.238401.68780HepG2HNRNPU
HIRIP3ENSG00000149929.11307.31710520.44400-0.760005.066003.41840HepG2HSPD1
HIRIP3ENSG00000149929.11367.80100505.74950-0.459502.046401.45660HepG2IGF2BP2
HIRIP3ENSG00000149929.11536.57070849.52200-0.662904.976203.84950HepG2LARP4
HIRIP3ENSG00000149929.11373.75110491.46830-0.395002.445401.38380HepG2LARP7
HIRIP3ENSG00000149929.11298.66670490.02230-0.714303.186302.05680HepG2METAP2
HIRIP3ENSG00000149929.11432.51290675.07440-0.642306.181905.01820HepG2MSI2
HIRIP3ENSG00000149929.11146.47710391.26670-1.4175013.6821012.08070HepG2PRPF8
HIRIP3ENSG00000149929.11414.29490553.26440-0.417302.271901.76640HepG2PTBP1
HIRIP3ENSG00000149929.11517.03850705.19820-0.447802.941902.33030HepG2PUF60
HIRIP3ENSG00000149929.11579.65490748.62870-0.369103.567402.91140HepG2PUM1
HIRIP3ENSG00000149929.11605.55730748.06340-0.304901.904601.34220HepG2PUM2
HIRIP3ENSG00000149929.11183.08430509.16260-1.4756010.937009.59800HepG2RAVER1
HIRIP3ENSG00000149929.11434.74540768.95240-0.8227011.6199010.04740HepG2RBM15
HIRIP3ENSG00000149929.11518.80320739.47090-0.511305.210604.55520HepG2RBM22
HIRIP3ENSG00000149929.11693.59950573.510500.274202.025501.48680HepG2RECQL
HIRIP3ENSG00000149929.11346.89180500.43150-0.528702.408501.52680HepG2RPS10
HIRIP3ENSG00000149929.11275.05540455.54150-0.727905.944105.08340HepG2RPS19
HIRIP3ENSG00000149929.11405.52880546.55040-0.430602.706401.91370HepG2RPS2
HIRIP3ENSG00000149929.11187.64250387.03680-1.044507.795006.55920HepG2RRP9
HIRIP3ENSG00000149929.11300.46620457.24910-0.605803.946402.82450HepG2SERBP1
HIRIP3ENSG00000149929.11488.11700759.13710-0.637104.189503.35020HepG2SF3A3
HIRIP3ENSG00000149929.11485.11290682.01290-0.491503.595302.79960HepG2SF3B1
HIRIP3ENSG00000149929.11299.49330835.19480-1.4796038.9689037.65740HepG2SRFBP1
HIRIP3ENSG00000149929.11499.34380696.31600-0.479703.025602.37410HepG2SRSF5
HIRIP3ENSG00000149929.11359.71750535.09190-0.572905.867304.91540HepG2SRSF7
HIRIP3ENSG00000149929.11410.64630563.23100-0.455803.531402.47900HepG2SUPT6H
HIRIP3ENSG00000149929.11261.46370504.98520-0.949607.737406.69960HepG2SUPV3L1
HIRIP3ENSG00000149929.11819.58810540.474800.600607.374206.53430HepG2TAF15
HIRIP3ENSG00000149929.11339.45600671.60180-0.9844011.213309.90300HepG2TARDBP
HIRIP3ENSG00000149929.11199.09540338.46120-0.765505.017203.73370HepG2TFIP11
HIRIP3ENSG00000149929.11284.24730438.64600-0.625902.564602.08000HepG2TIAL1
HIRIP3ENSG00000149929.11275.62450442.69240-0.683603.605902.98020HepG2TRIM56
HIRIP3ENSG00000149929.11499.22870673.24050-0.431404.189203.35850HepG2UPF1
HIRIP3ENSG00000149929.11532.53140649.98430-0.287502.012401.48480HepG2UTP3
HIRIP3ENSG00000149929.11253.54170560.09280-1.143409.837107.97650HepG2XRCC6
HIRIP3ENSG00000149929.11686.81540497.103200.466302.635101.92790HepG2XRN2
HIRIP3ENSG00000149929.11410.08680505.59670-0.302102.063101.47000HepG2ZC3H8
HIRIP3ENSG00000149929.11367.96380740.43290-1.0088021.1621019.99840HepG2ZNF622
HIRIP3ENSG00000149929.11320.04830508.96870-0.669304.052402.45330HepG2ZRANB2
HIRIP3ENSG00000149929.11824.726101107.66130-0.425504.042603.09460K562CPSF6
HIRIP3ENSG00000149929.11366.89230506.71720-0.465803.250102.11310K562DDX3X
HIRIP3ENSG00000149929.11936.24050575.595100.701705.383903.56630K562EEF2
HIRIP3ENSG00000149929.11799.731301126.97180-0.494904.402803.32290K562FMR1
HIRIP3ENSG00000149929.11231.93380430.78680-0.893306.099904.96220K562G3BP2
HIRIP3ENSG00000149929.11760.128201057.56350-0.476404.327203.34090K562GPKOW
HIRIP3ENSG00000149929.11855.05920612.259800.481803.493302.08800K562HNRNPK
HIRIP3ENSG00000149929.111416.286701140.214800.312702.618201.59300K562HNRNPL
HIRIP3ENSG00000149929.11561.54190902.97610-0.685302.532501.64220K562KRR1
HIRIP3ENSG00000149929.11777.506101032.29170-0.408903.152702.21450K562METAP2
HIRIP3ENSG00000149929.11436.45760573.25870-0.393302.383401.47890K562PCBP2
HIRIP3ENSG00000149929.111143.46620888.972300.363102.243201.49530K562PCBP3
HIRIP3ENSG00000149929.11910.51970681.890800.417003.828102.87870K562POLR2G
HIRIP3ENSG00000149929.11495.76700626.06100-0.336602.261401.65250K562PTBP1
HIRIP3ENSG00000149929.11753.464401138.96170-0.596105.811405.05970K562PUS1
HIRIP3ENSG00000149929.11219.97110411.08070-0.902104.769602.83310K562RAVER1
HIRIP3ENSG00000149929.11889.503901109.63190-0.319002.934002.32630K562RBM15
HIRIP3ENSG00000149929.11527.981801165.57500-1.142502.816401.59980K562SF1
HIRIP3ENSG00000149929.11678.906901054.74700-0.635609.760308.29740K562SF3A3
HIRIP3ENSG00000149929.11813.479601080.61890-0.409705.375304.12230K562SRPK2
HIRIP3ENSG00000149929.11415.82580613.78650-0.561803.279902.51380K562SRSF1
HIRIP3ENSG00000149929.11813.957901068.30630-0.392302.972101.52630K562TRIP6
HIRIP3ENSG00000149929.11726.02060969.72580-0.417603.684602.67490K562WDR3
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for HIRIP3 is not available on ENCORE database.





9 RBPs can affect the splicing of HIRIP3 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SEHIRIP3ENSG00000149929.11chr16-300052263000616430004960300051293000642330006538-0.214000.001280.02565excludedK562SRSF1
SEHIRIP3ENSG00000149929.11chr16-300052263000616430004960300051293000642330006538-0.226000.005510.08186excludedHepG2U2AF1
SEHIRIP3ENSG00000149929.11chr16-3000522630006164300049603000512930006423300065380.188000.001420.03574includedHepG2HNRNPK
SEHIRIP3ENSG00000149929.11chr16-300047793000487830004310300046913000496030005129-0.073000.002910.02989excludedK562AQR
SEHIRIP3ENSG00000149929.11chr16-300052263000616430004960300051293000642330006538-0.194000.001620.05736excludedK562FXR1
SEHIRIP3ENSG00000149929.11chr16-300052263000616430004960300051293000642330006538-0.265000.001190.02929excludedHepG2SRSF1
SEHIRIP3ENSG00000149929.11chr16-300052263000616430004960300051293000642330006538-0.342000.000040.00702excludedHepG2SUPV3L1
SEHIRIP3ENSG00000149929.11chr16-300052263000616430004960300051293000642330006538-0.235000.000270.08324excludedHepG2BCCIP
SEHIRIP3ENSG00000149929.11chr16-300052263000616430004960300051293000642330006538-0.231000.001800.06121excludedHepG2HNRNPC
SEHIRIP3ENSG00000149929.11chr16-300052263000616430004960300051293000642330006538-0.257000.000060.00174excludedK562HNRNPC
A3SSHIRIP3ENSG00000149929.11chr16-3000642330006575300064233000653830006663300067840.130000.000040.00035longerK562AQR
RIHIRIP3ENSG00000149929.11chr16-300064233000678430006423300065383000666330006784-0.082000.000390.07466excludedHepG2DKC1
RIHIRIP3ENSG00000149929.11chr16-3000642330006784300064233000653830006663300067840.205000.000000.00000includedK562AQR

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for HIRIP3 is not avaliable on ENCORE database.