GIT1

General Information

Gene Name       : GIT1
Gene ID             : ENSG00000108262.15
Essential Gene : No

Functions

Localization

Domains (AlphaFold: GIT1)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878GIT1ENSG00000108262.1512.6222.0817.35ENCSR000AEF
HepG2GIT1ENSG00000108262.1525.1014.0619.58ENCSR985KAT
K562GIT1ENSG00000108262.1522.5420.0921.31ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for GIT1 is not avaliable on ENCORE database.



Proteins bound to RNA
  • GIT1 RNA is bound by 9 proteins.  







eCLIP assay for GIT1 is not avaliable on ENCORE database.





9 proteins are bound to GIT1 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr172790144227901494-3'-UTR,intron-Distal,intron-Proximal5.2708220.03557K562PUM2
chr172790102527901120-3'-UTR,intron-Distal,intron-Proximal3.617054.23488K562FAM120A
chr172790077727900871-3'-UTR,intron-Distal3.956783.07786HepG2UPF1
chr172790123827901338-3'-UTR,intron-Distal5.8262632.87545K562PUM2
chr172790049927900586-3'-UTR,intron-Distal5.2980510.24308K562PUM2
chr172790157427901631-3'-UTR,intron-Distal5.016754.92687K562PCBP1
chr172791639927916473-5'-UTR,intron-Distal,intron-Proximal3.465046.48236HepG2DDX3X
chr172791649127916585-5'-UTR,intron-Distal,intron-Proximal5.2196811.35209HepG2DDX3X
chr172790243327902496-CDS,intron-Distal,intron-Proximal3.357463.59112HepG2PPIG
chr172790456327904664-CDS,intron-Distal,intron-Proximal4.422736.79646HepG2PRPF8
chr172790365627903743-CDS,intron-Distal,intron-Proximal4.718556.92814HepG2SF3B4
chr172790829927908375-CDS,intron-Distal,intron-Proximal3.539727.29769HepG2PRPF8
chr172790458327904663-intron-Distal,intron-Proximal4.138505.97994K562AQR
chr172790829227908356-intron-Distal,intron-Proximal4.992113.62536K562AQR
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for GIT1 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for GIT1 is not available on ENCORE database.

  • 90 RBPs can affect the levels of GIT1.  








The Knockdown/knockout RNA-Seq assay for GIT1 is not available on ENCORE database.





90 RBPs can affect the gene expression of GIT1 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
GIT1ENSG00000108262.11745.50100498.966600.579204.293903.08070HepG2ADAR
GIT1ENSG00000108262.11635.786801216.91410-0.936603.544102.95160HepG2AKAP1
GIT1ENSG00000108262.11632.33120806.98340-0.351902.166001.54840HepG2CPSF6
GIT1ENSG00000108262.11809.96310511.686300.662508.774106.99210HepG2YBX3
GIT1ENSG00000108262.111135.05980669.487700.7615014.1955012.96190HepG2CELF1
GIT1ENSG00000108262.11930.03730719.874400.369404.322803.42960HepG2DAZAP1
GIT1ENSG00000108262.111051.27210786.374400.418706.062004.89540HepG2DDX19B
GIT1ENSG00000108262.11828.970501108.25210-0.418902.235601.32450HepG2DDX5
GIT1ENSG00000108262.11352.08390502.43110-0.513002.161101.53120HepG2DNAJC21
GIT1ENSG00000108262.11720.15380498.003900.532007.099106.12290HepG2DNAJC2
GIT1ENSG00000108262.11451.51910619.40500-0.456102.956501.81270HepG2EFTUD2
GIT1ENSG00000108262.11452.28370603.17870-0.415402.581401.70540HepG2EIF3D
GIT1ENSG00000108262.111050.42120680.319200.626606.399105.18340HepG2EIF4G2
GIT1ENSG00000108262.111040.59640830.885000.324602.457101.66900HepG2EWSR1
GIT1ENSG00000108262.11458.11150846.60840-0.8860011.447809.89690HepG2FUBP3
GIT1ENSG00000108262.11584.65410995.55570-0.767902.856102.18080HepG2G3BP1
GIT1ENSG00000108262.11687.36210537.040600.355902.106701.32990HepG2GEMIN5
GIT1ENSG00000108262.111223.86610914.758600.419902.850502.20080HepG2GPKOW
GIT1ENSG00000108262.111261.89090850.773300.568609.415208.19010HepG2HNRNPF
GIT1ENSG00000108262.11839.72080655.753700.356703.818003.03410HepG2HNRNPL
GIT1ENSG00000108262.11698.51910872.97280-0.321601.870001.34280HepG2HNRNPLL
GIT1ENSG00000108262.11746.03540959.79500-0.363502.877201.90770HepG2HNRNPM
GIT1ENSG00000108262.11676.31960560.488500.270902.103001.56660HepG2HNRNPU
GIT1ENSG00000108262.111196.38890837.766400.514005.932104.91250HepG2IGF2BP1
GIT1ENSG00000108262.11718.48090572.519900.327503.223602.43720HepG2ILF2
GIT1ENSG00000108262.11881.93080597.325700.562002.738901.55440HepG2KHDRBS1
GIT1ENSG00000108262.111586.725501079.922200.555003.280402.59850HepG2MATR3
GIT1ENSG00000108262.111067.56130713.825400.580607.626206.37780HepG2NOL12
GIT1ENSG00000108262.11898.95260499.910400.8465010.340008.96170HepG2PPIL4
GIT1ENSG00000108262.11960.88820681.405800.495804.632503.88420HepG2PUF60
GIT1ENSG00000108262.111271.78940723.338800.8140022.1477020.79970HepG2PUM1
GIT1ENSG00000108262.111024.62880722.812700.503305.459104.53260HepG2PUM2
GIT1ENSG00000108262.11931.802101125.21290-0.272102.081501.52830HepG2QKI
GIT1ENSG00000108262.11879.518201137.25500-0.370803.657603.08380HepG2RBM22
GIT1ENSG00000108262.11766.217301021.22990-0.414502.913002.22350HepG2RBM25
GIT1ENSG00000108262.111259.909501076.987900.226202.065201.52250HepG2RECQL
GIT1ENSG00000108262.111536.29300916.527600.745108.076607.00500HepG2RPLP0
GIT1ENSG00000108262.111309.90300586.961501.1580023.5534022.04060HepG2RPS19
GIT1ENSG00000108262.11867.87950499.137900.7980015.0009013.68290HepG2SAFB2
GIT1ENSG00000108262.11816.35350413.018100.982902.910101.51350HepG2SF1
GIT1ENSG00000108262.111075.77890864.059100.316102.117001.49390HepG2SF3B1
GIT1ENSG00000108262.11935.02330653.354700.517007.627706.55160HepG2SLBP
GIT1ENSG00000108262.11725.58390582.076000.317802.559501.93640HepG2SMN1
GIT1ENSG00000108262.11387.01290961.42140-1.3128012.9859011.30860HepG2SNRNP70
GIT1ENSG00000108262.11679.954801129.07850-0.7316013.3728012.50030HepG2SRSF1
GIT1ENSG00000108262.111075.07620835.865000.363003.960103.14970HepG2SRSF7
GIT1ENSG00000108262.11946.204101115.21640-0.237102.202801.73260HepG2SSB
GIT1ENSG00000108262.11905.83790765.145200.243402.014401.46770HepG2SUCLG1
GIT1ENSG00000108262.11293.862701014.92750-1.7882051.5309049.50480HepG2TAF15
GIT1ENSG00000108262.11945.63750544.607500.7960011.8449010.93740HepG2TIAL1
GIT1ENSG00000108262.11839.39410549.488500.611209.003808.07720HepG2TRIM56
GIT1ENSG00000108262.111104.14600665.698800.729909.745507.91580HepG2TUFM
GIT1ENSG00000108262.11907.981701189.99370-0.390202.812002.17860HepG2U2AF1
GIT1ENSG00000108262.111394.15460704.628000.984406.683605.35280HepG2UBE2L3
GIT1ENSG00000108262.11553.57820318.967600.795303.489502.64120HepG2UCHL5
GIT1ENSG00000108262.11553.26310870.99940-0.6547010.885709.70170HepG2ZC3H8
GIT1ENSG00000108262.111180.70800839.253500.492407.050606.20520K562AGGF1
GIT1ENSG00000108262.11533.09020697.98180-0.388802.298901.51060K562BOP1
GIT1ENSG00000108262.11876.84900625.264300.487803.995602.68130K562CCAR1
GIT1ENSG00000108262.111514.241601157.136100.387904.886203.38830K562CPEB4
GIT1ENSG00000108262.11803.82240440.040700.8691012.104709.74590K562DDX3X
GIT1ENSG00000108262.111553.792201197.440400.375705.116604.26870K562DDX47
GIT1ENSG00000108262.11998.74550700.014800.512604.358102.62620K562DHX30
GIT1ENSG00000108262.111170.68780939.728800.316902.826401.94230K562DKC1
GIT1ENSG00000108262.11665.35690483.329300.461004.504402.93840K562EIF2S1
GIT1ENSG00000108262.111100.60680883.745700.316502.829902.10370K562EIF2S2
GIT1ENSG00000108262.111226.70450635.988900.947606.220904.66680K562EIF3A
GIT1ENSG00000108262.11434.35250234.079400.891809.306107.84990K562EIF3G
GIT1ENSG00000108262.11706.66520459.727400.620102.005601.30360K562EIF4A3
GIT1ENSG00000108262.11535.79220414.003300.371902.638401.52120K562EIF4B
GIT1ENSG00000108262.111782.868401412.253600.336104.208803.05810K562EIF4G2
GIT1ENSG00000108262.11534.76730401.291100.414202.939701.60000K562EWSR1
GIT1ENSG00000108262.11824.28350478.096000.7857011.8892010.72510K562FXR1
GIT1ENSG00000108262.1133.29350133.02960-1.998403.320402.53260K562G3BP2
GIT1ENSG00000108262.11900.36950703.226200.356402.595802.01480K562HNRNPC
GIT1ENSG00000108262.11549.48620327.425600.746803.045401.94980K562IGF2BP2
GIT1ENSG00000108262.11666.09850343.778200.9542012.5689010.68370K562MAGOH
GIT1ENSG00000108262.11526.74140343.030200.618703.750702.66330K562MATR3
GIT1ENSG00000108262.11866.32750561.585100.625302.406701.49700K562PABPN1
GIT1ENSG00000108262.11431.68020305.816700.497202.871601.87540K562PCBP2
GIT1ENSG00000108262.11694.14800334.027001.0552015.1215013.63500K562PTBP1
GIT1ENSG00000108262.111026.18770843.840800.282202.254501.71000K562RBM15
GIT1ENSG00000108262.11453.11540312.185500.537402.722701.35870K562RBM34
GIT1ENSG00000108262.11879.50240509.028200.788804.070303.07850K562RPS19
GIT1ENSG00000108262.11768.11240396.723900.953109.717307.72420K562RPS3
GIT1ENSG00000108262.111211.09180835.621200.535305.811304.24550K562SAFB
GIT1ENSG00000108262.11261.61660138.044700.922204.061303.01800K562SF3B4
GIT1ENSG00000108262.11885.56150545.441100.699107.448205.53420K562SRFBP1
GIT1ENSG00000108262.11506.99130327.495200.630404.727803.80780K562SRSF1
GIT1ENSG00000108262.11602.87190382.968000.654505.555403.96520K562SRSF4
GIT1ENSG00000108262.11450.54780309.387200.542202.346501.39310K562SRSF5
GIT1ENSG00000108262.11724.928101068.16310-0.559205.367003.43570K562SSRP1
GIT1ENSG00000108262.11820.08240331.365901.3072017.5885015.49030K562TARDBP
GIT1ENSG00000108262.11591.61120319.661000.8880010.148608.46870K562TIA1
GIT1ENSG00000108262.11526.96870313.873400.747404.664203.17670K562TRA2A
GIT1ENSG00000108262.111019.33400644.399900.661503.092302.08110K562TRIM56
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for GIT1 is not available on ENCORE database.





9 RBPs can affect the splicing of GIT1 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SEGIT1ENSG00000108262.11chr17-2790597927906006279057482790579727908355279084970.109000.000610.04049includedHepG2AKAP1
SEGIT1ENSG00000108262.11chr17-279059792790600627905748279057972790835527908398-0.110000.002280.07339excludedK562FXR1
SEGIT1ENSG00000108262.11chr17-2790597927906006279057482790579727908355279084970.118000.000260.01460includedHepG2MATR3
SEGIT1ENSG00000108262.11chr17-2790597927906006279057482790579727908355279084970.387000.001030.02318includedK562U2AF1
A3SSGIT1ENSG00000108262.11chr17-2790417727904311279041772790426527904662279047600.059000.003900.02324longerK562AQR
A3SSGIT1ENSG00000108262.11chr17-2790574827905839279057482790579727908355279083990.097000.009890.05239longerK562AQR
RIGIT1ENSG00000108262.11chr17-2790230527902721279023052790248827902647279027210.149000.000290.02422includedHepG2SUPV3L1
RIGIT1ENSG00000108262.11chr17-2790230527902721279023052790248827902647279027210.170000.006870.06929includedK562PRPF8
RIGIT1ENSG00000108262.11chr17-2790230527902721279023052790248827902647279027210.135000.002350.02468includedK562EFTUD2
RIGIT1ENSG00000108262.11chr17-2790230527902721279023052790248827902647279027210.136000.000310.01747includedHepG2XRN2

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for GIT1 is not avaliable on ENCORE database.