GATA4

General Information

Gene Name : GATA4
Gene ID : ENSG00000136574.17
Essential Gene : No

Functions

Not Available

Localization

Not Available

Domains (AlphaFold: GATA4)

Not Available

Antibody Validation

Not Avaiable

Expression Level in Cell lines

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID
Gm12878	GATA4	ENSG00000136574.17	0.00	0.00	0.00	ENCSR000AEF
HepG2	GATA4	ENSG00000136574.17	22.34	18.11	20.23	ENCSR985KAT
K562	GATA4	ENSG00000136574.17	0.04	0.11	0.07	ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.

eCLIP

No eCLIP experiment available

Antibody Validation

No Antibody Primary Validation image or Secondary image available

KD RNA-Seq

No KD RNA-Seq experiment available

RNA Bind-n-Seqn

No RBNS experiment available

Localization Image in HepG2

No Localization Information available

RBP	Antibody Info	Primary-HepG2	Secondary-HepG2	Primary-K562	Secondary-K562	Primary-UBERON	Primary-Hela

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for GATA4 is not avaliable on ENCORE database.

Proteins bound to RNA

GATA4 RNA is bound by 10 proteins.

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eCLIP assay for GATA4 is not avaliable on ENCORE database.

10 proteins are bound to GATA4 RNA:

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Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr8	11565389	11565441	+	3'-UTR,5'-UTR,intron-Distal	4.94930	26.77804	HepG2	DDX3X
chr8	11565441	11565489	+	3'-UTR,5'-UTR,intron-Distal	5.64269	16.76015	HepG2	DDX3X
chr8	11566204	11566268	+	CDS,intron-Distal	5.30976	11.88906	HepG2	XPO5
chr8	11561756	11561814	+	5'-UTR,intron-Distal,intron-Proximal	4.64269	10.54914	HepG2	DDX3X
chr8	11566412	11566488	+	CDS,intron-Distal,intron-Proximal	3.58836	9.83690	HepG2	PRPF8
chr8	11565363	11565389	+	3'-UTR,5'-UTR,intron-Distal,intron-Proximal	4.64900	8.97908	HepG2	DDX3X
chr8	11616908	11617036	+	3'-UTR	5.10374	7.98718	HepG2	UPF1
chr8	11606592	11606647	+	CDS,intron-Proximal	5.34878	7.36776	HepG2	PRPF8
chr8	11583335	11583467	+	intron-Distal	4.95444	7.16788	HepG2	RBFOX2
chr8	11567083	11567136	+	intron-Distal	3.91733	5.85439	HepG2	CSTF2T
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

Showing 1 to 10 of 22 entries

eCLIP assay for GATA4 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout assay for GATA4 is not available on ENCORE database.
75 RBPs can affect the levels of GATA4.

CanvasJS.com

The Knockdown/knockout RNA-Seq assay for GATA4 is not available on ENCORE database.

75 RBPs can affect the gene expression of GATA4 :

Show entries

Search:

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
GATA4	ENSG00000136574.13	343.55720	1054.18620	-1.61750	54.33060	52.84580	HepG2	SRFBP1
GATA4	ENSG00000136574.13	337.76130	771.04570	-1.19080	26.27500	24.90050	HepG2	SRSF9
GATA4	ENSG00000136574.13	1126.81920	520.06910	1.11540	23.72620	22.53190	HepG2	TIAL1
GATA4	ENSG00000136574.13	405.78660	1011.60620	-1.31790	17.29980	16.08540	HepG2	AKAP1
GATA4	ENSG00000136574.13	1465.57190	915.26220	0.67910	15.05520	14.05120	HepG2	SSB
GATA4	ENSG00000136574.13	972.46360	484.43010	1.00530	14.92650	13.61970	HepG2	HNRNPA1
GATA4	ENSG00000136574.13	1103.64880	688.18020	0.68130	13.34730	12.17040	HepG2	PUS1
GATA4	ENSG00000136574.13	484.65700	851.85560	-0.81360	12.57300	11.50790	HepG2	TAF15
GATA4	ENSG00000136574.13	1165.04930	692.47820	0.75050	10.74900	9.67710	HepG2	PUF60
GATA4	ENSG00000136574.13	2408.97410	1243.80860	0.95360	10.60280	9.21880	HepG2	SF3A3
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

Showing 1 to 10 of 75 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

The Knockdown/knockout RNA-Seq assay for GATA4 is not available on ENCORE database.

3 RBPs can affect the splicing of GATA4 :

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Search:

Event Type	Gene Name	Gene ID	chr	Strand	ExonStart	ExonEnd	upstreamES	upstreamEE	downstreamES	downstreamEE	dPSI	p-value	FDR	is_included	Cell Line	Affected by RBP
SE	GATA4	ENSG00000136574.13	chr8	+	11563422	11563542	11561730	11561813	11565364	11565523	0.22900	0.00024	0.05671	included	HepG2	DKC1
SE	GATA4	ENSG00000136574.13	chr8	+	11563422	11563542	11561730	11561813	11565364	11566171	-0.74100	0.00072	0.04449	excluded	HepG2	NCBP2
SE	GATA4	ENSG00000136574.13	chr8	+	11563422	11563542	11561730	11561813	11565364	11566171	-0.30100	0.00177	0.07417	excluded	HepG2	PCBP1

Showing 1 to 3 of 3 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

GATA4

General Information

Functions

Localization

Domains (AlphaFold: GATA4)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for GATA4 is not avaliable on ENCORE database.

10 proteins are bound to GATA4 RNA:

eCLIP assay for GATA4 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for GATA4 is not available on ENCORE database.

75 RBPs can affect the gene expression of GATA4 :

The Knockdown/knockout RNA-Seq assay for GATA4 is not available on ENCORE database.

3 RBPs can affect the splicing of GATA4 :

The Knockdown/knockout RNA-Seq assay for GATA4 is not avaliable on ENCORE database.