FAM207A

General Information

Gene Name       : FAM207A
Gene ID             : ENSG00000160256.12
Essential Gene : No

Functions

Localization

Domains (AlphaFold: FAM207A)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878FAM207AENSG00000160256.121.084.042.56ENCSR000AEF
HepG2FAM207AENSG00000160256.1237.1011.6724.39ENCSR985KAT
K562FAM207AENSG00000160256.1213.695.549.62ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for FAM207A is not avaliable on ENCORE database.



Proteins bound to RNA
  • FAM207A RNA is bound by 31 proteins.  







eCLIP assay for FAM207A is not avaliable on ENCORE database.





31 proteins are bound to FAM207A RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr214639665146396735+3'-UTR,CDS4.011096.66441K562AKAP1
chr214635993446360048+5'-UTR,CDS3.927383.70637K562DDX3X
chr214635996446360103+5'-UTR,CDS,intron-Proximal3.1382811.10936HepG2DDX3X
chr214639306246393117+CDS,intron-Proximal4.285684.69223K562SF3B4
chr214639315646393212+CDS,intron-Proximal5.013023.70131HepG2PRPF8
chr214636010046360141+CDS,intron-Proximal3.867474.90219HepG2AQR
chr214636373046363778+CDS,intron-Proximal3.165283.40321HepG2GRWD1
chr214636363546363730+CDS,intron-Proximal3.361256.24463HepG2GRWD1
chr214636010046360108+CDS,intron-Proximal3.789924.41130K562AQR
chr214635999546360043+CDS3.789093.14687K562CSTF2T
chr214638001446380024+CDS,intron-Proximal4.504144.85237K562UPF1
chr214638701546387061+CDS3.903483.16434HepG2LARP4
chr214636004646360080+CDS3.511093.22800K562AKAP1
chr214637850846378566+intron-Distal4.030193.07008K562NONO
chr214639264146392682+intron-Distal4.502865.67757HepG2CSTF2T
chr214636939546369453+intron-Distal5.012526.12846K562EWSR1
chr214637355646373607+intron-Distal3.486554.71513K562NONO
chr214636494746365027+intron-Distal4.675806.67086K562NONO
chr214636859046368670+intron-Distal4.005269.66342K562EWSR1
chr214636778646367823+intron-Distal4.201273.94684HepG2CSTF2T
chr214637698946377024+intron-Distal3.200273.15535K562EWSR1
chr214636408646364150+intron-Distal4.395744.08332K562NONO
chr214637273846372792+intron-Distal3.383324.59961K562NONO
chr214638709946387212+intron-Distal,intron-Proximal3.853735.85201K562PRPF8
chr214639264046392708+intron-Distal4.269454.62429HepG2NKRF
chr214639170246391782+intron-Distal4.192928.40143HepG2CSTF2T
chr214637698146377036+intron-Distal4.204463.31905K562NONO
chr214639133846391409+intron-Distal4.5500811.63297HepG2CSTF2T
chr214637437146374517+intron-Distal3.108485.71658HepG2NKRF
chr214637713646377204+intron-Distal3.679954.81215K562EWSR1
chr214636639646366464+intron-Distal5.2836710.03902K562NONO
chr214639168046391751+intron-Distal3.216245.15026HepG2NKRF
chr214637435146374400+intron-Distal3.480664.92762HepG2CSTF2T
chr214639133446391407+intron-Distal4.179997.65187K562DROSHA
chr214636648146366557+intron-Distal3.998096.75450K562NONO
chr214636880546368863+intron-Distal5.379059.60017K562EWSR1
chr214639022646390286+intron-Distal4.428424.58989K562NONO
chr214637285146372902+intron-Distal3.861244.81215K562EWSR1
chr214637258546372661+intron-Distal3.436798.34053K562EWSR1
chr214637155946371614+intron-Distal3.069763.00221HepG2CSTF2T
chr214636441946364467+intron-Distal3.962893.57432K562NONO
chr214637121946371324+intron-Distal3.456194.70352K562SLTM
chr214638867946388727+intron-Distal3.074943.00589HepG2HNRNPC
chr214637392346373971+intron-Distal4.283674.72743K562NONO
chr214637401946374099+intron-Distal3.758813.25786HepG2FAM120A
chr214637419446374236+intron-Distal4.401895.16036HepG2CSTF2T
chr214637121846371268+intron-Distal3.195233.77567K562NONO
chr214637152046371656+intron-Distal3.527255.45063K562FUS
chr214637419546374269+intron-Distal5.3242410.18369K562EWSR1
chr214637403146374112+intron-Distal4.993906.37044HepG2NKRF
chr214636704346367137+intron-Distal3.916927.48556K562EWSR1
chr214639269846392731+intron-Distal3.217133.46580HepG2CSTF2T
chr214639109046391123+intron-Distal4.247834.36133HepG2CSTF2T
chr214637132046371376+intron-Distal4.044643.98553K562NONO
chr214636139346361430+intron-Distal3.025973.00129HepG2SUGP2
chr214637274146372801+intron-Distal4.036496.09610K562EWSR1
chr214637404346374111+intron-Distal4.600615.54639K562CSTF2T
chr214637418646374278+intron-Distal4.069965.61877K562NONO
chr214637122846371264+intron-Distal3.518993.64784K562EWSR1
chr214639565046395742+intron-Distal4.502865.67757HepG2CSTF2T
chr214639134446391434+intron-Distal3.095985.05027HepG2NKRF
chr214637121846371314+intron-Distal3.664674.33898HepG2FAM120A
chr214637432746374468+intron-Distal5.8812512.82111K562EWSR1
chr214636754746367602+intron-Distal4.859677.35452K562NONO
chr214639185346391959+intron-Distal4.514945.18111K562CSTF2T
chr214637123246371332+intron-Distal3.992743.43867K562CSTF2T
chr214636710346367143+intron-Distal4.688226.40241K562NONO
chr214638714946387200+intron-Distal,intron-Proximal4.437244.98766K562EWSR1
chr214636454146364610+intron-Distal3.127243.39478K562TAF15
chr214639101046391080+intron-Distal3.897945.37486K562NONO
chr214638640146386524+intron-Distal4.768336.58841HepG2HNRNPK
chr214637300946373040+intron-Distal3.396434.22628K562EWSR1
chr214636847846368551+intron-Distal3.518356.96229HepG2CSTF2T
chr214636786446367912+intron-Distal4.503413.75568K562SLTM
chr214637285746372901+intron-Distal3.277473.36616K562NONO
chr214639606646396162+intron-Distal4.295893.53896K562NONO
chr214636638146366446+intron-Distal3.114474.95074HepG2NKRF
chr214639110746391179+intron-Distal4.795896.16396K562NONO
chr214636765846367702+intron-Distal4.413134.96496K562NONO
chr214637037946370435+intron-Distal4.722476.27023K562EWSR1
chr214636786546367903+intron-Distal5.166957.22498K562EWSR1
chr214636721546367278+intron-Distal4.742447.09445K562NONO
chr214639135246391415+intron-Distal3.930213.49885K562SMNDC1
chr214636917046369246+intron-Distal4.322634.27047K562AKAP8L
chr214637256546372649+intron-Distal3.608485.05880HepG2NKRF
chr214636831246368373+intron-Distal3.699727.48556K562EWSR1
chr214636727846367330+intron-Distal4.781616.40665K562NONO
chr214637561946375666+intron-Distal3.965533.02711K562EWSR1
chr214637275246372793+intron-Distal3.194373.69530HepG2CSTF2T
chr214637434646374409+intron-Distal3.263614.23616K562TIA1
chr214637774746377874+intron-Distal3.961274.33867K562FUS
chr214639169646391779+intron-Distal4.319314.48935K562CSTF2T
chr214636849246368538+intron-Distal3.436163.71694HepG2NKRF
chr214637778046377820+intron-Distal4.400244.98766K562EWSR1
chr214637355546373618+intron-Distal3.605484.06602HepG2FAM120A
chr214639134346391398+intron-Distal3.830545.70158K562EWSR1
chr214637156946371654+intron-Distal4.462894.23759K562NONO
chr214639005346390093+intron-Distal4.383324.48497K562NONO
chr214636638146366439+intron-Distal4.211466.60022K562EWSR1
chr214636455746364627+intron-Distal3.637627.84057K562NONO
chr214636435146364419+intron-Distal3.428424.59961K562NONO
chr214636832846368376+intron-Distal3.092413.65070K562SLTM
chr214638455246384665+intron-Distal3.857773.34601K562HNRNPK
chr214636901746369067+intron-Distal4.351334.09073K562SLTM
chr214639228746392325+intron-Distal4.090083.16310HepG2CSTF2T
chr214636680246366856+intron-Distal4.150494.19541K562SMNDC1
chr214636754446367592+intron-Distal4.590115.94830K562TIA1
chr214637434446374392+intron-Distal4.594416.40241K562NONO
chr214637051846370599+intron-Distal4.316803.53896K562NONO
chr214638714046387212+intron-Distal,intron-Proximal4.556714.23759K562NONO
chr214637332246373391+intron-Distal4.371793.94684HepG2CSTF2T
chr214639246446392512+intron-Distal4.378094.10339HepG2CSTF2T
chr214636493546364995+intron-Distal3.830545.70158K562EWSR1
chr214639264146392708+intron-Distal5.195257.54450K562EWSR1
chr214636454646364620+intron-Distal3.662576.92611K562EWSR1
chr214637027846370325+intron-Distal4.561205.05096K562EWSR1
chr214637036746370468+intron-Distal3.840936.54942K562NONO
chr214639077246390841+intron-Distal3.656946.71496HepG2CSTF2T
chr214639166146391769+intron-Distal5.4524110.18369K562EWSR1
chr214637778046377836+intron-Distal4.331385.34533K562NONO
chr214637839646378494+intron-Distal,intron-Proximal4.700136.94957HepG2CSTF2T
chr214639265246392735+intron-Distal3.661664.40109K562AKAP8L
chr214639002746390089+intron-Distal3.527315.16304HepG2CSTF2T
chr214636454946364625+intron-Distal3.421733.62708K562CSTF2T
chr214637439346374460+intron-Distal4.486814.14795HepG2SFPQ
chr214637052246370558+intron-Distal4.276274.16830K562EWSR1
chr214637403546374102+intron-Distal3.251047.46255HepG2CSTF2T
chr214636785446367918+intron-Distal3.965297.00469K562NONO
chr214637121446371270+intron-Distal3.382564.45183HepG2CSTF2T
chr214636880346368876+intron-Distal4.795896.16396K562NONO
chr214637359746373657+intron-Distal4.230543.18269HepG2XPO5
chr214637123246371318+intron-Distal3.829293.34442K562FUS
chr214637256346372665+intron-Distal3.325234.48257K562FUS
chr214637222246372268+intron-Distal4.094413.57432K562NONO
chr214636638346366431+intron-Distal4.158393.36882K562SLTM
chr214639113646391169+intron-Distal3.273143.69530HepG2CSTF2T
chr214639270646392757+intron-Distal3.902753.57432K562NONO
chr214637402846374135+intron-Distal5.8805113.99818K562EWSR1
chr214637277846372887+intron-Distal4.213813.48173K562GTF2F1
chr214638413946384239+intron-Distal4.504959.60550HepG2QKI
chr214636851146368557+intron-Distal4.014956.09610K562EWSR1
chr214639546846395506+intron-Distal3.918983.28464K562EWSR1
chr214637405646374129+intron-Distal3.681094.95619HepG2SFPQ
chr214636862846368695+intron-Distal4.093054.22598K562CSTF2T
chr214637156046371621+intron-Distal4.840927.22498K562EWSR1
chr214638413446384198+intron-Distal4.873614.99795K562QKI
chr214637441946374485+intron-Distal4.097663.98488K562TIA1
chr214637129146371352+intron-Distal4.854196.58779K562EWSR1
chr214637405846374094+intron-Distal4.132403.79177K562SMNDC1
chr214637440946374463+intron-Distal3.711885.85006K562NONO
chr214638712246387201+intron-Distal,intron-Proximal3.887455.83003HepG2RBM22
chr214637434846374402+intron-Distal4.039213.37414K562CSTF2T
chr214639061046390648+intron-Distal3.651514.35339HepG2CSTF2T
chr214638989846389953+intron-Distal4.678596.32277HepG2CSTF2T
chr214636454346364617+intron-Distal3.819945.64872HepG2NKRF
chr214636763546367680+intron-Distal4.097123.91243HepG2NKRF
chr214639606546396147+intron-Distal4.562724.46290K562EWSR1
chr214636011446360307+intron-Distal,intron-Proximal5.6671013.82964HepG2EFTUD2
chr214637899146379051+intron-Distal3.256443.80158K562NONO
chr214636830346368365+intron-Distal3.378364.23616K562TIA1
chr214637354146373615+intron-Distal4.418989.43936K562EWSR1
chr214636974646369811+intron-Distal3.491394.19798K562SLTM
chr214636848546368557+intron-Distal4.966574.28089HepG2FAM120A
chr214639183946391895+intron-Distal3.095405.21772HepG2CSTF2T
chr214637405746374121+intron-Distal5.061629.05671K562NONO
chr214637259646372649+intron-Distal3.674683.84192K562DDX52
chr214636761946367675+intron-Distal5.057407.86458K562EWSR1
chr214636761546367673+intron-Distal4.074898.28918HepG2CSTF2T
chr214638683946386929+intron-Distal,intron-Proximal3.934475.02403K562SF3B4
chr214639059646390652+intron-Distal3.653724.81215K562EWSR1
chr214637123846371316+intron-Distal4.668965.45161K562AGGF1
chr214637318346373263+intron-Distal4.404979.01758K562EWSR1
chr214637404146374109+intron-Distal3.317323.37207K562FAM120A
chr214637279646372860+intron-Distal5.007673.11886K562DROSHA
chr214638712846387196+intron-Proximal5.684658.88193HepG2EFTUD2
chr214639303846393082+intron-Proximal3.958563.16310HepG2CSTF2T
chr214636010846360136+intron-Proximal4.638505.97994K562AQR
chr214639653046396585+intron-Proximal3.281393.23466HepG2CSTF2T
chr214639653546396591+intron-Proximal4.795214.57682HepG2SF3B4
chr214636013646360143+intron-Proximal4.036165.35619K562AQR
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for FAM207A is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for FAM207A is not available on ENCORE database.

  • 66 RBPs can affect the levels of FAM207A.  








The Knockdown/knockout RNA-Seq assay for FAM207A is not available on ENCORE database.





66 RBPs can affect the gene expression of FAM207A :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
FAM207AENSG00000160256.8381.02160230.145000.727205.021004.24610HepG2BOP1
FAM207AENSG00000160256.8234.44470341.77550-0.543804.006003.23380HepG2CKAP4
FAM207AENSG00000160256.8395.56360207.933500.9277010.314509.22620HepG2CELF1
FAM207AENSG00000160256.8417.74520266.855800.646503.629202.92990HepG2DDX6
FAM207AENSG00000160256.8248.68400327.10590-0.395402.068501.46990HepG2DKC1
FAM207AENSG00000160256.8184.32280283.32900-0.620203.019002.35160HepG2EIF4A3
FAM207AENSG00000160256.8368.53500459.14140-0.317101.937001.41420HepG2ETF1
FAM207AENSG00000160256.8142.82270258.49850-0.855903.080802.25450HepG2FUBP3
FAM207AENSG00000160256.8294.78380203.585000.533903.842503.05660HepG2HNRNPL
FAM207AENSG00000160256.8121.69700228.56240-0.909304.651103.85630HepG2HNRNPLL
FAM207AENSG00000160256.8516.81770287.702000.845006.135305.22420HepG2MATR3
FAM207AENSG00000160256.8155.59040262.13760-0.752603.950203.09810HepG2PABPC4
FAM207AENSG00000160256.8175.29150282.25510-0.687204.642703.89090HepG2PCBP1
FAM207AENSG00000160256.8195.90670287.20550-0.551903.587002.98170HepG2PTBP1
FAM207AENSG00000160256.8346.07490224.636200.623405.685104.89780HepG2PUM1
FAM207AENSG00000160256.8205.89870348.25650-0.758206.860005.96490HepG2PUS1
FAM207AENSG00000160256.8212.43470311.04980-0.550103.060102.40880HepG2QKI
FAM207AENSG00000160256.8152.83700282.29800-0.885205.996905.03930HepG2RBM25
FAM207AENSG00000160256.844.86930119.09550-1.408305.401004.33610HepG2RRP9
FAM207AENSG00000160256.8144.2092092.951800.633502.468901.85440HepG2SAFB2
FAM207AENSG00000160256.8255.12290140.316400.862404.494302.83330HepG2SART3
FAM207AENSG00000160256.8263.56990202.927800.377102.048301.42740HepG2SLBP
FAM207AENSG00000160256.8143.80590312.10960-1.117909.834309.06620HepG2SRSF1
FAM207AENSG00000160256.8311.81870208.942400.577504.199303.45690HepG2SRSF5
FAM207AENSG00000160256.8151.66840253.91800-0.743405.098204.39040HepG2SRSF9
FAM207AENSG00000160256.8211.99090129.640200.709403.165501.98180HepG2STIP1
FAM207AENSG00000160256.8390.71840237.603400.717503.833903.12330HepG2SUCLG1
FAM207AENSG00000160256.891.93740155.40880-0.757302.592001.93460HepG2SUPV3L1
FAM207AENSG00000160256.8158.40790280.53710-0.824505.655404.90350HepG2TAF15
FAM207AENSG00000160256.8154.18460222.78850-0.531002.067801.42850HepG2TARDBP
FAM207AENSG00000160256.8148.48440257.77450-0.795805.143204.01470HepG2TIA1
FAM207AENSG00000160256.8200.01720102.325000.966906.498505.70000HepG2TRIM56
FAM207AENSG00000160256.8291.89280206.751700.497402.697801.83610HepG2TUFM
FAM207AENSG00000160256.8357.62320218.866000.708303.775702.79040HepG2UBE2L3
FAM207AENSG00000160256.8478.30990277.801000.783808.638307.67460HepG2UTP3
FAM207AENSG00000160256.8214.72950133.470800.685902.879601.75420HepG2XPO5
FAM207AENSG00000160256.8109.56890162.73580-0.570702.268001.65180HepG2ZC3H8
FAM207AENSG00000160256.8434.88980324.464100.422502.565201.62470K562AKAP8
FAM207AENSG00000160256.8643.29740443.462800.536603.715702.25310K562APOBEC3C
FAM207AENSG00000160256.8119.91250174.43720-0.540702.090701.40060K562CPSF6
FAM207AENSG00000160256.8735.19560421.007400.8042012.3859011.11430K562DDX47
FAM207AENSG00000160256.8180.06010100.631200.839302.467501.52230K562EIF3A
FAM207AENSG00000160256.8184.7285094.763800.962905.276704.19270K562EIF3G
FAM207AENSG00000160256.8109.79970177.50890-0.693002.764801.91110K562FMR1
FAM207AENSG00000160256.8324.38000234.008400.471002.457601.88090K562FXR1
FAM207AENSG00000160256.813.9127050.99530-1.874003.699502.85540K562G3BP2
FAM207AENSG00000160256.8294.76650409.56660-0.474503.202201.97370K562GLRX3
FAM207AENSG00000160256.8123.26180181.85160-0.561002.034801.51220K562HNRNPC
FAM207AENSG00000160256.8534.74620384.139800.477102.316401.49780K562HNRNPU
FAM207AENSG00000160256.8180.88620115.389000.648502.273801.36900K562IGF2BP2
FAM207AENSG00000160256.8221.69110121.193900.871105.300904.12820K562MAGOH
FAM207AENSG00000160256.8202.76630120.936600.745502.739501.82110K562MATR3
FAM207AENSG00000160256.8327.95730430.60680-0.392902.463601.69970K562MTPAP
FAM207AENSG00000160256.8245.28570384.65680-0.649102.660901.45310K562PABPC1
FAM207AENSG00000160256.8156.98940278.60820-0.827604.593303.52350K562PCBP3
FAM207AENSG00000160256.8136.03310213.69630-0.651603.064902.22060K562POLR2G
FAM207AENSG00000160256.8364.36080268.470000.440502.289101.54330K562PPIG
FAM207AENSG00000160256.8254.93550117.753101.114308.271807.16450K562PTBP1
FAM207AENSG00000160256.8439.17830583.29500-0.409402.760601.69560K562PUM1
FAM207AENSG00000160256.8196.22990112.870000.797802.559701.75410K562RBM22
FAM207AENSG00000160256.8136.5911067.351001.020003.240502.14850K562RPS3
FAM207AENSG00000160256.8285.18590472.10350-0.727207.360806.07940K562SF3A3
FAM207AENSG00000160256.888.4502052.948700.740202.093901.35100K562SF3B4
FAM207AENSG00000160256.8383.43540483.68090-0.335102.243201.39110K562SRPK2
FAM207AENSG00000160256.8192.94340115.445700.740903.411002.63110K562SRSF1
FAM207AENSG00000160256.8192.31310109.050800.818404.188802.85180K562SRSF5
FAM207AENSG00000160256.8183.86820283.83450-0.626403.229601.85570K562STAU1
FAM207AENSG00000160256.8249.92930116.820401.097107.666806.42040K562TARDBP
FAM207AENSG00000160256.8249.62140112.691301.147307.225405.80380K562TIA1
FAM207AENSG00000160256.890.43020156.82850-0.794303.017202.03580K562TIAL1
FAM207AENSG00000160256.8187.82990110.626800.763603.369302.14180K562TRA2A
FAM207AENSG00000160256.8475.02990618.28450-0.380302.790801.38330K562UBE2L3
FAM207AENSG00000160256.8405.90840507.29800-0.321702.167001.52610K562UPF1
FAM207AENSG00000160256.8296.59610434.07820-0.549503.898502.85300K562WDR3
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for FAM207A is not available on ENCORE database.





6 RBPs can affect the splicing of FAM207A :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SEFAM207AENSG00000160256.8chr21+4639311146393180463869484638709646396594463969040.077000.010500.08448includedK562AQR
SEFAM207AENSG00000160256.8chr21+463931114639318046386948463870964639659446396888-0.207000.000740.04032excludedHepG2PTBP1
SEFAM207AENSG00000160256.8chr21+463931114639318046386948463870964639659446396888-0.233000.001480.06478excludedHepG2PCBP1
A5SSFAM207AENSG00000160256.8chr21+463635984636375246363598463637074638001446380083-0.310000.000630.03740shorterK562U2AF2
A5SSFAM207AENSG00000160256.8chr21+463635984636375246363598463637074638001446380083-0.174000.000080.03562shorterHepG2HNRNPL
MXEFAM207AENSG00000160256.8chr21+46363598463637524638001446380083463599244636010146386948463870960.128000.000630.026201includedK562AGGF1
MXEFAM207AENSG00000160256.8chr21+4638694846387096463931114639318046363598463637524639659446396904-0.128000.001080.009792includedK562AQR

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for FAM207A is not avaliable on ENCORE database.