DENND4B

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID
Gm12878	DENND4B	ENSG00000198837.9	14.81	21.08	17.95	ENCSR000AEF
HepG2	DENND4B	ENSG00000198837.9	27.38	16.11	21.74	ENCSR985KAT
K562	DENND4B	ENSG00000198837.9	37.92	31.89	34.91	ENCSR000AEO

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for DENND4B is not avaliable on ENCORE database.

Proteins bound to RNA

DENND4B RNA is bound by 42 proteins.

eCLIP assay for DENND4B is not avaliable on ENCORE database.

42 proteins are bound to DENND4B RNA:

Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr1	153902202	153902275	-	3'-UTR,intron-Distal	3.75289	4.14074	K562	UPF1
chr1	153902225	153902274	-	3'-UTR,intron-Distal	4.35951	6.54171	HepG2	DDX55
chr1	153902633	153902707	-	3'-UTR,intron-Distal,intron-Proximal	4.66092	12.34111	HepG2	LIN28B
chr1	153902230	153902273	-	3'-UTR,intron-Distal	4.04851	6.57824	K562	ZC3H11A
chr1	153902158	153902228	-	3'-UTR,intron-Distal	4.57172	8.06526	K562	DDX6
chr1	153902129	153902208	-	3'-UTR,intron-Distal	3.02175	3.84952	K562	DDX55
chr1	153902061	153902098	-	3'-UTR,intron-Distal	3.46676	4.34343	K562	ZC3H11A
chr1	153902207	153902271	-	3'-UTR,intron-Distal	3.16823	3.26655	HepG2	LSM11
chr1	153901990	153902053	-	3'-UTR,intron-Distal	4.65073	13.28998	K562	PUM2
chr1	153902226	153902276	-	3'-UTR,intron-Distal	3.12590	5.96827	K562	PUM2
chr1	153902610	153902666	-	3'-UTR,intron-Distal,intron-Proximal	6.32061	20.70527	K562	LIN28B
chr1	153902596	153902633	-	3'-UTR,intron-Distal,intron-Proximal	4.70111	4.86776	HepG2	LIN28B
chr1	153902666	153902708	-	3'-UTR,intron-Distal,intron-Proximal	5.11241	10.23897	K562	LIN28B
chr1	153919026	153919107	-	5'-UTR,intron-Distal	4.52619	8.63083	HepG2	PRPF4
chr1	153919024	153919118	-	5'-UTR,intron-Distal	3.15055	7.02876	K562	DROSHA
chr1	153919026	153919091	-	5'-UTR,intron-Distal	3.39629	6.99831	K562	FTO
chr1	153919024	153919151	-	5'-UTR,intron-Distal	3.03168	6.00630	HepG2	GTF2F1
chr1	153919029	153919083	-	5'-UTR,intron-Distal	3.46653	4.21158	HepG2	CSTF2T
chr1	153919027	153919100	-	5'-UTR,intron-Distal	3.87918	5.94245	K562	DDX51
chr1	153919021	153919116	-	5'-UTR,intron-Distal	3.35489	7.30599	K562	DDX6
chr1	153919107	153919153	-	5'-UTR,intron-Distal	4.95166	5.90542	HepG2	PRPF4
chr1	153919105	153919155	-	5'-UTR,intron-Distal	3.12190	8.99710	K562	NCBP2
chr1	153919030	153919114	-	5'-UTR,intron-Distal	3.12903	6.53290	HepG2	BUD13
chr1	153919017	153919152	-	5'-UTR,intron-Distal	4.10727	7.42472	HepG2	NCBP2
chr1	153918789	153918867	-	5'-UTR,intron-Distal	3.93252	5.48791	HepG2	DDX3X
chr1	153919042	153919103	-	5'-UTR,intron-Distal	3.21474	6.93667	HepG2	PPIG
chr1	153919022	153919103	-	5'-UTR,intron-Distal	3.91931	8.55399	K562	GEMIN5
chr1	153919009	153919151	-	5'-UTR,intron-Distal	3.32361	10.09642	K562	CSTF2T
chr1	153916858	153916897	-	5'-UTR,CDS,intron-Distal,intron-Proximal	4.95353	12.17654	K562	AQR
chr1	153919011	153919105	-	5'-UTR,intron-Distal	3.70343	9.35066	K562	GTF2F1
chr1	153919032	153919117	-	5'-UTR,intron-Distal	4.85044	27.25736	K562	DDX24
chr1	153906622	153906694	-	CDS,intron-Distal	4.00511	3.53067	K562	SRSF1
chr1	153914806	153914880	-	CDS,intron-Distal,intron-Proximal	3.55614	6.19583	K562	RBM15
chr1	153913003	153913052	-	CDS,intron-Distal	3.25358	5.77687	HepG2	PPIG
chr1	153905118	153905187	-	CDS,intron-Distal	5.32164	6.76175	HepG2	PPIG
chr1	153905962	153905987	-	CDS,intron-Distal	3.42063	6.12893	K562	BUD13
chr1	153912592	153912635	-	CDS,intron-Distal,intron-Proximal	5.47274	10.43516	HepG2	PRPF8
chr1	153912264	153912330	-	CDS,intron-Distal,intron-Proximal	3.77465	5.00060	HepG2	SF3B4
chr1	153912196	153912344	-	CDS,intron-Distal,intron-Proximal	3.10724	11.52577	K562	BUD13
chr1	153903014	153903045	-	CDS,intron-Distal,intron-Proximal	4.49561	3.49905	HepG2	PPIG
chr1	153913706	153913744	-	CDS,intron-Distal,intron-Proximal	3.83546	5.24350	K562	PCBP1
chr1	153912189	153912255	-	CDS,intron-Distal	4.80338	10.18181	HepG2	PPIG
chr1	153911376	153911411	-	CDS,intron-Distal	3.53672	12.81333	K562	DDX24
chr1	153912712	153912733	-	CDS,intron-Distal,intron-Proximal	5.10331	6.75320	K562	AQR
chr1	153913335	153913384	-	CDS,intron-Distal,intron-Proximal	3.00626	5.17453	K562	PRPF8
chr1	153905476	153905498	-	CDS,intron-Distal	3.40977	8.56897	K562	DDX24
chr1	153912235	153912358	-	CDS,intron-Distal,intron-Proximal	3.41334	6.27771	K562	SMNDC1
chr1	153902832	153902904	-	CDS,intron-Distal	3.75851	5.99892	HepG2	LSM11
chr1	153905958	153905995	-	CDS,intron-Distal,intron-Proximal	3.43894	6.13978	HepG2	PPIG
chr1	153914829	153914877	-	CDS,intron-Distal,intron-Proximal	3.84467	5.34978	HepG2	PRPF8
chr1	153910212	153910295	-	CDS,intron-Distal	4.67069	19.62313	K562	DDX24
chr1	153915093	153915121	-	CDS,intron-Distal,intron-Proximal	3.70538	9.84476	K562	AQR
chr1	153913340	153913396	-	CDS,intron-Distal,intron-Proximal	3.61906	4.20273	HepG2	PRPF8
chr1	153914567	153914637	-	CDS,intron-Distal,intron-Proximal	4.05226	3.50006	HepG2	SF3B4
chr1	153915596	153915642	-	CDS,intron-Distal,intron-Proximal	3.93039	11.47097	K562	AQR
chr1	153914789	153914833	-	CDS,intron-Distal,intron-Proximal	5.28992	22.83458	K562	AQR
chr1	153912238	153912327	-	CDS,intron-Distal,intron-Proximal	4.96254	7.45424	HepG2	AQR
chr1	153903534	153903587	-	CDS,intron-Distal,intron-Proximal	3.43768	7.52070	K562	SF3B4
chr1	153903461	153903501	-	CDS,intron-Distal	3.90111	5.35619	K562	AQR
chr1	153906212	153906312	-	CDS,intron-Distal	4.78768	27.25736	K562	DDX24
chr1	153914567	153914640	-	CDS,intron-Distal,intron-Proximal	5.98480	25.78697	K562	SF3B4
chr1	153905340	153905380	-	CDS,intron-Distal,intron-Proximal	3.28580	9.97241	K562	DDX24
chr1	153913490	153913541	-	CDS,intron-Distal,intron-Proximal	4.33715	7.38843	HepG2	BUD13
chr1	153906626	153906691	-	CDS,intron-Distal	3.65244	6.00907	HepG2	PPIG
chr1	153903299	153903344	-	CDS,intron-Distal,intron-Proximal	3.28919	6.61645	HepG2	BUD13
chr1	153914485	153914494	-	CDS,intron-Distal	4.09459	3.53690	K562	ZNF622
chr1	153914457	153914529	-	CDS,intron-Distal	3.67769	7.09278	HepG2	PPIG
chr1	153911491	153911518	-	CDS,intron-Distal	3.98196	10.53109	K562	DDX24
chr1	153906014	153906106	-	CDS,intron-Distal	4.36902	10.49381	K562	PCBP1
chr1	153905639	153905689	-	CDS,intron-Distal,intron-Proximal	3.84084	6.04280	HepG2	PRPF8
chr1	153914803	153914823	-	CDS,intron-Distal,intron-Proximal	3.55493	4.41267	HepG2	PPIG
chr1	153906210	153906327	-	CDS,intron-Distal	3.89029	7.27605	HepG2	GRWD1
chr1	153902846	153902917	-	CDS,intron-Distal,intron-Proximal	4.36716	4.52184	HepG2	PABPN1
chr1	153915099	153915123	-	CDS,intron-Distal,intron-Proximal	3.62714	3.88924	K562	PRPF8
chr1	153902830	153902887	-	CDS,intron-Distal	3.83995	3.21205	HepG2	EIF3H
chr1	153910213	153910256	-	CDS,intron-Distal	3.67353	8.15794	K562	BUD13
chr1	153907424	153907451	-	CDS,intron-Distal,intron-Proximal	4.18542	8.46556	K562	BUD13
chr1	153912242	153912345	-	CDS,intron-Distal,intron-Proximal	5.46315	29.19655	K562	SF3B4
chr1	153902807	153902867	-	CDS,intron-Distal	5.66034	8.65463	K562	ZC3H11A
chr1	153910212	153910237	-	CDS,intron-Distal	3.54635	3.12941	K562	UCHL5
chr1	153912173	153912273	-	CDS,intron-Distal	3.88039	13.33074	K562	UCHL5
chr1	153913698	153913741	-	CDS,intron-Distal,intron-Proximal	3.04884	9.43276	K562	DDX24
chr1	153906205	153906341	-	CDS,intron-Distal	3.59753	6.61645	HepG2	BUD13
chr1	153916769	153916791	-	CDS,intron-Distal	3.39561	3.66187	K562	ZNF622
chr1	153913513	153913614	-	CDS,intron-Distal,intron-Proximal	5.35155	9.60578	HepG2	AQR
chr1	153913504	153913544	-	CDS,intron-Distal,intron-Proximal	3.98632	9.84476	K562	AQR
chr1	153913474	153913522	-	CDS,intron-Distal	4.55575	4.53890	K562	PCBP1
chr1	153916763	153916826	-	CDS,intron-Distal	4.03555	3.15171	K562	SRSF1
chr1	153906203	153906281	-	CDS,intron-Distal	3.14744	11.08040	K562	BUD13
chr1	153903305	153903345	-	CDS,intron-Distal,intron-Proximal	5.06920	6.47067	K562	SF3B4
chr1	153910295	153910339	-	CDS,intron-Distal	4.24457	17.20091	K562	DDX24
chr1	153912218	153912276	-	CDS,intron-Distal	3.52731	4.52272	K562	SRSF1
chr1	153912262	153912305	-	CDS,intron-Distal,intron-Proximal	5.33769	14.81877	K562	AQR
chr1	153905419	153905432	-	CDS,intron-Distal,intron-Proximal	4.00819	6.28735	K562	DDX24
chr1	153906319	153906360	-	CDS,intron-Distal,intron-Proximal	3.87311	8.61602	K562	AQR
chr1	153916532	153916591	-	CDS,intron-Distal,intron-Proximal	4.26906	9.27186	HepG2	PPIG
chr1	153913707	153913755	-	CDS,intron-Distal,intron-Proximal	3.98544	5.38389	HepG2	PCBP2
chr1	153909212	153909275	-	CDS,intron-Distal,intron-Proximal	5.72291	8.42776	K562	SF3B4
chr1	153906641	153906690	-	CDS,intron-Distal	3.94621	3.60441	HepG2	GRWD1
chr1	153908559	153908594	-	CDS,intron-Distal	4.99050	9.32383	K562	DDX24
chr1	153910319	153910338	-	CDS,intron-Distal	3.84930	6.08151	K562	BUD13
chr1	153905236	153905308	-	CDS,intron-Distal,intron-Proximal	5.62194	6.39134	HepG2	SF3A3
chr1	153903312	153903329	-	CDS,intron-Distal,intron-Proximal	4.58947	6.85891	K562	DDX24
chr1	153912277	153912334	-	CDS,intron-Distal,intron-Proximal	4.91945	12.17993	HepG2	SF3A3
chr1	153904860	153904934	-	CDS,intron-Distal,intron-Proximal	5.62502	25.49678	K562	AQR
chr1	153914830	153914873	-	CDS,intron-Distal,intron-Proximal	3.45716	8.92089	K562	BUD13
chr1	153906203	153906284	-	CDS,intron-Distal	5.84994	14.67011	HepG2	PPIG
chr1	153915301	153915357	-	CDS,intron-Distal,intron-Proximal	4.95292	11.76457	HepG2	PRPF8
chr1	153905476	153905572	-	CDS,intron-Distal,intron-Proximal	6.16197	38.39804	K562	AQR
chr1	153913490	153913539	-	CDS,intron-Distal,intron-Proximal	3.78535	8.08346	HepG2	PRPF8
chr1	153912198	153912279	-	CDS,intron-Distal	3.80581	18.72024	K562	DDX24
chr1	153914529	153914588	-	CDS,intron-Distal,intron-Proximal	3.19622	6.69553	HepG2	PPIG
chr1	153913462	153913559	-	CDS,intron-Distal,intron-Proximal	4.49800	12.24966	K562	SF3B4
chr1	153914575	153914628	-	CDS,intron-Distal,intron-Proximal	3.97719	6.66865	HepG2	SF3A3
chr1	153914571	153914639	-	CDS,intron-Distal,intron-Proximal	3.48804	8.80518	K562	EFTUD2
chr1	153913848	153913906	-	CDS,intron-Distal,intron-Proximal	3.82211	5.47443	HepG2	PCBP2
chr1	153916766	153916800	-	CDS,intron-Distal	3.07073	8.05533	K562	DDX24
chr1	153905487	153905560	-	CDS,intron-Distal,intron-Proximal	5.39897	8.88638	HepG2	AQR
chr1	153907435	153907488	-	CDS,intron-Distal,intron-Proximal	3.61716	5.67192	K562	SF3B4
chr1	153913475	153913553	-	CDS,intron-Distal,intron-Proximal	4.05004	17.88860	K562	BUD13
chr1	153913495	153913550	-	CDS,intron-Distal,intron-Proximal	4.65456	12.28583	HepG2	EFTUD2
chr1	153905696	153905730	-	CDS,intron-Distal,intron-Proximal	3.28396	7.77368	K562	DDX24
chr1	153904633	153904688	-	CDS,intron-Distal,intron-Proximal	3.81701	10.95071	HepG2	PRPF8
chr1	153910206	153910269	-	CDS,intron-Distal	4.14789	3.60441	HepG2	GRWD1
chr1	153906297	153906361	-	CDS,intron-Distal,intron-Proximal	3.09896	8.69849	K562	BUD13
chr1	153912064	153912074	-	CDS,intron-Distal,intron-Proximal	4.32480	7.39346	K562	DDX24
chr1	153906638	153906672	-	CDS,intron-Distal	3.49663	5.23038	K562	ZNF622
chr1	153914962	153915026	-	intron-Distal,intron-Proximal	3.48720	7.07647	K562	PRPF8
chr1	153914986	153915025	-	intron-Distal,intron-Proximal	8.23492	57.71503	K562	AQR
chr1	153912854	153912906	-	intron-Distal,intron-Proximal	3.99984	5.34978	HepG2	PRPF8
chr1	153913217	153913323	-	intron-Distal,intron-Proximal	3.30167	4.64577	K562	HNRNPK
chr1	153913566	153913671	-	intron-Distal,intron-Proximal	5.68811	12.37853	HepG2	EFTUD2
chr1	153916523	153916533	-	intron-Distal,intron-Proximal	6.32264	16.98862	K562	AQR
chr1	153913588	153913666	-	intron-Distal,intron-Proximal	4.49745	5.18476	K562	RBFOX2
chr1	153912302	153912377	-	intron-Distal,intron-Proximal	3.65521	6.39581	HepG2	EFTUD2
chr1	153915260	153915309	-	intron-Distal,intron-Proximal	5.55675	16.94745	K562	AQR
chr1	153912583	153912631	-	intron-Distal,intron-Proximal	4.35198	13.09382	K562	AQR
chr1	153915025	153915032	-	intron-Distal,intron-Proximal	6.79602	39.13912	K562	AQR
chr1	153916408	153916434	-	intron-Distal	4.78459	6.48405	K562	AQR
chr1	153911534	153911577	-	intron-Distal,intron-Proximal	3.42126	5.82046	K562	SF3B4
chr1	153916452	153916485	-	intron-Distal,intron-Proximal	3.38999	8.04398	K562	AQR
chr1	153912475	153912488	-	intron-Distal	4.53183	4.21675	K562	ZNF622
chr1	153913342	153913378	-	intron-Distal,intron-Proximal	5.49211	7.28294	K562	AQR
chr1	153905506	153905569	-	intron-Distal,intron-Proximal	4.82468	20.66358	K562	SF3B4
chr1	153905510	153905576	-	intron-Distal,intron-Proximal	3.74786	11.28521	K562	BUD13
chr1	153905514	153905574	-	intron-Distal,intron-Proximal	4.20423	7.57443	HepG2	BUD13
chr1	153905028	153905070	-	intron-Distal,intron-Proximal	5.99361	9.63974	K562	AQR
chr1	153916435	153916510	-	intron-Distal,intron-Proximal	5.46238	19.20599	HepG2	AQR
chr1	153905032	153905079	-	intron-Distal,intron-Proximal	5.12692	5.24235	HepG2	EFTUD2
chr1	153909955	153909963	-	intron-Distal,intron-Proximal	4.76633	8.01338	K562	AQR
chr1	153914208	153914258	-	intron-Distal,intron-Proximal	4.52086	3.77360	K562	GTF2F1
chr1	153914204	153914262	-	intron-Distal,intron-Proximal	5.38601	12.38995	K562	EFTUD2
chr1	153914867	153914880	-	intron-Distal,intron-Proximal	5.92089	24.46729	K562	AQR
chr1	153913572	153913621	-	intron-Distal,intron-Proximal	4.51561	7.52362	K562	EFTUD2
chr1	153913621	153913680	-	intron-Distal,intron-Proximal	3.97136	9.47365	K562	EFTUD2
chr1	153914220	153914321	-	intron-Distal,intron-Proximal	4.40103	8.92943	HepG2	AQR
chr1	153913546	153913677	-	intron-Distal,intron-Proximal	3.25759	5.16666	K562	AATF
chr1	153913657	153913705	-	intron-Distal,intron-Proximal	3.34233	11.19864	K562	AQR
chr1	153914833	153914841	-	intron-Distal,intron-Proximal	6.16765	29.93494	K562	AQR
chr1	153915309	153915353	-	intron-Distal,intron-Proximal	7.43160	35.08048	K562	AQR
chr1	153918727	153918753	-	intron-Distal	3.19963	7.13900	K562	AQR
chr1	153913588	153913652	-	intron-Distal,intron-Proximal	3.05111	5.41277	K562	UCHL5
chr1	153912435	153912524	-	intron-Distal	3.71605	4.13525	K562	RBFOX2
chr1	153913559	153913606	-	intron-Distal,intron-Proximal	5.35564	10.89051	K562	SF3B4
chr1	153917986	153918049	-	intron-Distal	5.08712	11.93667	K562	EIF4G2
chr1	153904663	153904679	-	intron-Distal,intron-Proximal	5.74336	9.95272	K562	AQR
chr1	153913617	153913661	-	intron-Distal,intron-Proximal	4.95213	15.48559	K562	BUD13
chr1	153917983	153918056	-	intron-Distal	3.57886	5.39069	K562	TARDBP
chr1	153905076	153905117	-	intron-Distal,intron-Proximal	4.05425	6.79646	HepG2	PRPF8
chr1	153913567	153913617	-	intron-Distal,intron-Proximal	4.37220	14.03664	K562	BUD13
chr1	153913095	153913145	-	intron-Distal,intron-Proximal	3.60464	10.21568	K562	BUD13
chr1	153916488	153916523	-	intron-Distal,intron-Proximal	5.09785	19.12979	K562	AQR
chr1	153905070	153905107	-	intron-Distal,intron-Proximal	6.75232	41.87056	K562	AQR
chr1	153913678	153913705	-	intron-Distal,intron-Proximal	4.84054	5.35117	HepG2	PRPF8
chr1	153912864	153912893	-	intron-Distal,intron-Proximal	4.40432	7.50107	K562	AQR
chr1	153908497	153908516	-	intron-Distal,intron-Proximal	3.99211	4.98250	K562	AQR
chr1	153912025	153912037	-	intron-Distal,intron-Proximal	5.32359	7.23718	K562	AQR
chr1	153914955	153914986	-	intron-Distal,intron-Proximal	5.64643	20.15911	K562	AQR
chr1	153913565	153913615	-	intron-Distal,intron-Proximal	3.90245	3.82719	HepG2	RBM22
chr1	153913568	153913603	-	intron-Distal,intron-Proximal	4.78003	6.01989	HepG2	PRPF8
chr1	153905798	153905853	-	intron-Distal,intron-Proximal	4.11000	3.50006	HepG2	SF3B4
chr1	153918231	153918275	-	intron-Distal	4.58076	6.11036	HepG2	XPO5
chr1	153918693	153918709	-	intron-Distal	5.42110	7.28294	K562	AQR
chr1	153917012	153917088	-	intron-Distal	3.91898	3.02711	K562	EWSR1
chr1	153916510	153916534	-	intron-Distal,intron-Proximal	4.83490	11.87300	HepG2	AQR
chr1	153912037	153912064	-	intron-Distal,intron-Proximal	5.28459	6.44303	K562	AQR
chr1	153905107	153905118	-	intron-Distal,intron-Proximal	5.86598	30.31447	K562	AQR
chr1	153909921	153909955	-	intron-Distal,intron-Proximal	5.02731	11.12698	K562	AQR
chr1	153904636	153904663	-	intron-Distal,intron-Proximal	5.91360	10.48996	K562	AQR
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

eCLIP assay for DENND4B is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout assay for DENND4B is not available on ENCORE database.
77 RBPs can affect the levels of DENND4B.

The Knockdown/knockout RNA-Seq assay for DENND4B is not available on ENCORE database.

77 RBPs can affect the gene expression of DENND4B :

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
DENND4B	ENSG00000198837.5	734.44470	1219.50350	-0.73160	2.70230	2.17680	HepG2	AKAP1
DENND4B	ENSG00000198837.5	1944.90520	1626.10620	0.25820	3.13760	2.41330	HepG2	AUH
DENND4B	ENSG00000198837.5	1089.38710	809.75170	0.42790	3.48550	2.82230	HepG2	BOP1
DENND4B	ENSG00000198837.5	596.13480	866.46820	-0.53950	5.34670	4.31880	HepG2	CALR
DENND4B	ENSG00000198837.5	471.87860	958.58720	-1.02250	4.29230	3.34190	HepG2	CIRBP
DENND4B	ENSG00000198837.5	1454.06100	1271.66360	0.19330	1.97780	1.33470	HepG2	DAZAP1
DENND4B	ENSG00000198837.5	564.13870	834.32860	-0.56460	3.38560	2.36900	HepG2	DDX24
DENND4B	ENSG00000198837.5	858.61600	1103.57040	-0.36210	2.54880	1.57380	HepG2	DDX5
DENND4B	ENSG00000198837.5	1524.17830	1003.84510	0.60240	4.10230	3.36200	HepG2	DDX6
DENND4B	ENSG00000198837.5	880.11280	1325.47860	-0.59080	7.07410	6.08710	HepG2	DKC1
DENND4B	ENSG00000198837.5	951.73040	749.41600	0.34470	3.24410	2.48720	HepG2	DNAJC21
DENND4B	ENSG00000198837.5	723.01510	997.57000	-0.46440	3.50710	2.47490	HepG2	EEF2
DENND4B	ENSG00000198837.5	1441.21830	964.48330	0.57940	2.71810	2.13050	HepG2	EIF2S1
DENND4B	ENSG00000198837.5	607.03680	809.76450	-0.41570	2.78150	1.87600	HepG2	EIF3D
DENND4B	ENSG00000198837.5	959.20750	1254.54320	-0.38720	4.80960	3.75600	HepG2	EIF4G1
DENND4B	ENSG00000198837.5	1452.67300	1867.05050	-0.36210	5.82750	5.00880	HepG2	ETF1
DENND4B	ENSG00000198837.5	1002.32840	1353.77600	-0.43360	4.47160	3.41580	HepG2	EWSR1
DENND4B	ENSG00000198837.5	1478.76180	1075.93990	0.45870	2.33020	1.69320	HepG2	FXR1
DENND4B	ENSG00000198837.5	552.29930	720.97890	-0.38450	2.22600	1.42890	HepG2	GEMIN5
DENND4B	ENSG00000198837.5	1246.20300	842.60990	0.56450	3.15910	2.48010	HepG2	GPKOW
DENND4B	ENSG00000198837.5	559.89390	906.94600	-0.69590	3.57420	1.97460	HepG2	HLTF
DENND4B	ENSG00000198837.5	572.54210	756.59470	-0.40210	2.71640	2.07540	HepG2	HNRNPA1
DENND4B	ENSG00000198837.5	702.56660	835.98300	-0.25080	2.01760	1.49000	HepG2	HNRNPU
DENND4B	ENSG00000198837.5	1100.38430	853.93360	0.36570	5.06410	4.09770	HepG2	ILF2
DENND4B	ENSG00000198837.5	498.26220	713.05450	-0.51710	3.74200	2.87320	HepG2	NSUN2
DENND4B	ENSG00000198837.5	906.42980	673.42530	0.42860	2.29580	1.55700	HepG2	PRPF8
DENND4B	ENSG00000198837.5	1013.84710	1276.84610	-0.33270	3.07240	2.36490	HepG2	PUM2
DENND4B	ENSG00000198837.5	822.26690	1411.15470	-0.77920	19.92490	18.54260	HepG2	PUS1
DENND4B	ENSG00000198837.5	484.17870	862.99960	-0.83380	5.04130	4.10380	HepG2	RAVER1
DENND4B	ENSG00000198837.5	827.34750	1060.01800	-0.35750	2.79670	2.11850	HepG2	RBM25
DENND4B	ENSG00000198837.5	585.31990	848.22580	-0.53520	2.85480	1.89760	HepG2	RPS10
DENND4B	ENSG00000198837.5	570.80070	787.97870	-0.46520	3.92920	3.20910	HepG2	RPS19
DENND4B	ENSG00000198837.5	949.83830	744.49570	0.35130	3.91760	3.17340	HepG2	SAFB2
DENND4B	ENSG00000198837.5	1584.18330	1122.76520	0.49660	8.60820	7.65490	HepG2	SF3B4
DENND4B	ENSG00000198837.5	528.42780	885.57770	-0.74490	4.81680	3.77260	HepG2	SNRNP70
DENND4B	ENSG00000198837.5	1496.87310	1762.49910	-0.23570	3.02260	2.50620	HepG2	SRFBP1
DENND4B	ENSG00000198837.5	890.85380	1171.96540	-0.39570	4.75930	4.18170	HepG2	SRSF1
DENND4B	ENSG00000198837.5	466.87830	856.47980	-0.87540	7.64700	5.90690	HepG2	SRSF3
DENND4B	ENSG00000198837.5	1406.31470	1188.46720	0.24270	2.42180	1.83150	HepG2	SRSF5
DENND4B	ENSG00000198837.5	1282.05470	1530.22600	-0.25530	2.90790	2.38560	HepG2	SSB
DENND4B	ENSG00000198837.5	564.80060	869.39840	-0.62230	4.20320	3.39340	HepG2	SUPV3L1
DENND4B	ENSG00000198837.5	770.01060	1053.52370	-0.45230	4.93380	4.21920	HepG2	TAF15
DENND4B	ENSG00000198837.5	1063.91990	812.41440	0.38900	3.71630	3.15470	HepG2	TIAL1
DENND4B	ENSG00000198837.5	1163.65770	819.56870	0.50560	7.40170	6.55550	HepG2	TRIM56
DENND4B	ENSG00000198837.5	422.91140	969.91810	-1.19750	32.44610	30.63230	HepG2	ZC3H8
DENND4B	ENSG00000198837.5	4777.87180	3822.49160	0.32180	6.56310	5.74360	K562	AGGF1
DENND4B	ENSG00000198837.5	5401.99730	3977.50880	0.44150	2.92160	2.25040	K562	AKAP8L
DENND4B	ENSG00000198837.5	2942.50490	3706.90460	-0.33320	2.85290	2.25690	K562	AQR
DENND4B	ENSG00000198837.5	2165.80400	1890.08850	0.19630	2.16250	1.31190	K562	BCLAF1
DENND4B	ENSG00000198837.5	1852.00680	1492.93560	0.31080	2.84400	2.05070	K562	CPSF6
DENND4B	ENSG00000198837.5	1785.04130	1433.91350	0.31590	3.42990	2.23360	K562	CSTF2
DENND4B	ENSG00000198837.5	2903.81120	2308.97130	0.33060	3.51290	2.31920	K562	DDX3X
DENND4B	ENSG00000198837.5	1490.11200	2024.20130	-0.44190	4.32620	2.61970	K562	DNAJC21
DENND4B	ENSG00000198837.5	2584.04430	1706.17610	0.59880	4.42300	3.25240	K562	EFTUD2
DENND4B	ENSG00000198837.5	2811.22250	2172.44200	0.37180	5.27820	3.60910	K562	EIF4B
DENND4B	ENSG00000198837.5	1245.02360	1761.84480	-0.50090	4.56250	3.05000	K562	FKBP4
DENND4B	ENSG00000198837.5	1906.11240	2508.71560	-0.39630	6.29090	5.43290	K562	FXR1
DENND4B	ENSG00000198837.5	2134.37470	1693.19480	0.33400	3.18530	1.62280	K562	G3BP1
DENND4B	ENSG00000198837.5	685.82590	1276.27040	-0.89600	9.00860	7.58210	K562	G3BP2
DENND4B	ENSG00000198837.5	1977.52990	1425.35750	0.47230	5.33770	4.24080	K562	GPKOW
DENND4B	ENSG00000198837.5	2723.25850	3316.66130	-0.28440	2.64490	1.90510	K562	GRSF1
DENND4B	ENSG00000198837.5	2448.84950	3129.95680	-0.35400	2.72350	1.65910	K562	HNRNPA1
DENND4B	ENSG00000198837.5	2136.95760	2594.93040	-0.28010	2.03570	1.34880	K562	HSPD1
DENND4B	ENSG00000198837.5	2640.70600	1771.29080	0.57600	3.17510	2.05030	K562	IGF2BP2
DENND4B	ENSG00000198837.5	2311.98560	1801.51900	0.35980	3.41740	2.05490	K562	IGF2BP3
DENND4B	ENSG00000198837.5	2314.48280	1809.19420	0.35520	3.46340	1.68950	K562	LSM11
DENND4B	ENSG00000198837.5	3235.18710	2074.74030	0.64080	2.94050	1.91020	K562	PABPN1
DENND4B	ENSG00000198837.5	2162.46900	1655.99690	0.38490	2.36020	1.46060	K562	PCBP2
DENND4B	ENSG00000198837.5	2340.06520	1818.63720	0.36360	3.73610	2.66350	K562	PSIP1
DENND4B	ENSG00000198837.5	3709.85680	4984.41230	-0.42610	3.36470	2.46530	K562	PUF60
DENND4B	ENSG00000198837.5	3941.38790	5303.18280	-0.42820	3.64720	2.41240	K562	PUM1
DENND4B	ENSG00000198837.5	4334.69140	5194.56030	-0.26110	2.38250	1.49030	K562	PUM2
DENND4B	ENSG00000198837.5	4951.55940	3843.38150	0.36540	6.12720	5.27010	K562	RBM15
DENND4B	ENSG00000198837.5	3295.46860	1897.26070	0.79650	3.47250	2.08450	K562	SF1
DENND4B	ENSG00000198837.5	2868.35380	3280.63740	-0.19380	2.08930	1.37420	K562	SF3A3
DENND4B	ENSG00000198837.5	2155.37510	1326.44880	0.70030	13.45320	11.47020	K562	SF3B4
DENND4B	ENSG00000198837.5	4107.98480	2312.76450	0.82870	4.08710	2.37970	K562	SFPQ
DENND4B	ENSG00000198837.5	1650.88490	2073.19730	-0.32860	2.57400	1.36030	K562	SLBP
DENND4B	ENSG00000198837.5	1925.63810	1573.24460	0.29150	2.28080	1.37030	K562	SRFBP1
DENND4B	ENSG00000198837.5	2274.67920	1674.37550	0.44190	2.90490	1.82470	K562	SRSF5
DENND4B	ENSG00000198837.5	1841.52030	2247.56120	-0.28750	2.87090	2.03460	K562	SYNCRIP
DENND4B	ENSG00000198837.5	2591.34900	1794.13080	0.53030	6.03190	4.95880	K562	TARDBP
DENND4B	ENSG00000198837.5	2311.13930	1730.66120	0.41720	5.00350	3.85240	K562	TIA1
DENND4B	ENSG00000198837.5	2425.87080	1698.46840	0.51420	6.12630	4.34800	K562	TRA2A
DENND4B	ENSG00000198837.5	2405.28630	1858.67610	0.37180	3.66370	2.54650	K562	TRIM56
DENND4B	ENSG00000198837.5	2443.83880	3136.72060	-0.36010	7.59960	6.26180	K562	WDR43
DENND4B	ENSG00000198837.5	3439.76720	4175.56870	-0.27970	2.43870	1.63730	K562	ZC3H8
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

The Knockdown/knockout RNA-Seq assay for DENND4B is not available on ENCORE database.

15 RBPs can affect the splicing of DENND4B :

Event Type	Gene Name	Gene ID	chr	Strand	ExonStart	ExonEnd	2ndExonStart	2ndExonEnd	upstreamES	upstreamEE	downstreamES	downstreamEE	dPSI	p-value	FDR	is_included	Cell Line	Affected by RBP
SE	DENND4B	ENSG00000198837.5	chr1	-	153903167	153903333			153903014	153903079	153903422	153903540	-0.13300	0.00052	0.02264	excluded	K562	PRPF8
SE	DENND4B	ENSG00000198837.5	chr1	-	153913379	153913524			153912906	153913082	153913706	153913765	-0.06400	0.00374	0.08442	excluded	K562	AKAP8L
SE	DENND4B	ENSG00000198837.5	chr1	-	153913379	153913524			153912906	153913082	153913706	153913765	-0.20700	0.00000	0.00001	excluded	K562	PUS1
SE	DENND4B	ENSG00000198837.5	chr1	-	153912064	153912280			153911375	153911521	153912631	153912732	-0.11700	0.00521	0.09093	excluded	HepG2	SRSF1
SE	DENND4B	ENSG00000198837.5	chr1	-	153913379	153913524			153912906	153913082	153913706	153913870	-0.06900	0.00386	0.07643	excluded	K562	AGGF1
A5SS	DENND4B	ENSG00000198837.5	chr1	-	153903422	153903540			153903498	153903540	153903167	153903333	-0.34200	0.00006	0.03764	shorter	HepG2	SSB
RI	DENND4B	ENSG00000198837.5	chr1	-	153903167	153903540			153903167	153903333	153903422	153903540	0.21700	0.00491	0.05298	included	HepG2	PRPF8
RI	DENND4B	ENSG00000198837.5	chr1	-	153903014	153903540			153903014	153903079	153903167	153903540	0.08500	0.00910	0.08801	included	K562	PRPF8
RI	DENND4B	ENSG00000198837.5	chr1	-	153903014	153903540			153903014	153903079	153903167	153903540	0.05400	0.00865	0.08380	included	HepG2	PCBP1
RI	DENND4B	ENSG00000198837.5	chr1	-	153903014	153903540			153903014	153903079	153903167	153903540	0.06400	0.00412	0.07687	included	HepG2	SRSF1
RI	DENND4B	ENSG00000198837.5	chr1	-	153903167	153903540			153903167	153903333	153903422	153903540	0.18200	0.00268	0.05405	included	HepG2	SRSF1
RI	DENND4B	ENSG00000198837.5	chr1	-	153903014	153903540			153903014	153903079	153903167	153903540	0.07200	0.00193	0.02060	included	HepG2	TAF15
RI	DENND4B	ENSG00000198837.5	chr1	-	153903014	153903540			153903014	153903079	153903167	153903540	0.29700	0.00000	0.00001	included	HepG2	U2AF1
RI	DENND4B	ENSG00000198837.5	chr1	-	153903167	153903540			153903167	153903333	153903422	153903540	0.15100	0.00467	0.06267	included	HepG2	G3BP1
RI	DENND4B	ENSG00000198837.5	chr1	-	153903014	153903540			153903014	153903079	153903167	153903540	0.07800	0.00433	0.05292	included	K562	U2AF2
RI	DENND4B	ENSG00000198837.5	chr1	-	153903014	153903540			153903014	153903079	153903167	153903540	0.09200	0.00463	0.04367	included	K562	EFTUD2
RI	DENND4B	ENSG00000198837.5	chr1	-	153903167	153903540			153903167	153903333	153903422	153903540	0.10800	0.00003	0.01002	included	K562	PUM1
RI	DENND4B	ENSG00000198837.5	chr1	-	153903014	153903540			153903014	153903079	153903167	153903540	0.08200	0.00000	0.00000	included	K562	AQR
RI	DENND4B	ENSG00000198837.5	chr1	-	153903167	153903540			153903167	153903333	153903422	153903540	0.08100	0.00284	0.01731	included	K562	AQR
RI	DENND4B	ENSG00000198837.5	chr1	-	153903167	153903540			153903167	153903333	153903422	153903540	0.11100	0.00288	0.07993	included	K562	TARDBP
RI	DENND4B	ENSG00000198837.5	chr1	-	153903167	153903540			153903167	153903333	153903498	153903540	-0.22900	0.00052	0.03759	excluded	HepG2	SSB
MXE	DENND4B	ENSG00000198837.5	chr1	-	153905117	153905253	153905336	153905506	153904679	153904916	153905672	153905795	-0.17100	0.00199	0.03876	2included	K562	PRPF8

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

DENND4B

General Information

Functions

Localization

Domains (AlphaFold: DENND4B)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for DENND4B is not avaliable on ENCORE database.

42 proteins are bound to DENND4B RNA:

eCLIP assay for DENND4B is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for DENND4B is not available on ENCORE database.

77 RBPs can affect the gene expression of DENND4B :

The Knockdown/knockout RNA-Seq assay for DENND4B is not available on ENCORE database.

15 RBPs can affect the splicing of DENND4B :

The Knockdown/knockout RNA-Seq assay for DENND4B is not avaliable on ENCORE database.