COQ10B

General Information

Gene Name       : COQ10B
Gene ID             : ENSG00000115520.8
Essential Gene : No

Functions

Localization

Domains (AlphaFold: COQ10B)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878COQ10BENSG00000115520.811.948.9910.46ENCSR000AEF
HepG2COQ10BENSG00000115520.87.3714.6110.99ENCSR985KAT
K562COQ10BENSG00000115520.86.985.896.44ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for COQ10B is not avaliable on ENCORE database.



Proteins bound to RNA
  • COQ10B RNA is bound by 3 proteins.  







eCLIP assay for COQ10B is not avaliable on ENCORE database.





3 proteins are bound to COQ10B RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr2198338785198338868+3'-UTR6.4092516.90444K562PUM2
chr2198334843198334919+CDS,intron-Proximal5.206535.01842HepG2PRPF8
chr2198331036198331195+intron-Distal4.439835.07733HepG2PTBP1
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for COQ10B is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for COQ10B is not available on ENCORE database.

  • 94 RBPs can affect the levels of COQ10B.  








The Knockdown/knockout RNA-Seq assay for COQ10B is not available on ENCORE database.





94 RBPs can affect the gene expression of COQ10B :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
COQ10BENSG00000115520.4262.15440430.23540-0.714705.222903.91760HepG2ADAR
COQ10BENSG00000115520.41988.11080707.572101.4903026.6174025.16330HepG2AKAP1
COQ10BENSG00000115520.4585.52370427.752700.452902.524701.52830HepG2AKAP8
COQ10BENSG00000115520.4758.49190471.988100.684306.580205.44910HepG2AKAP8L
COQ10BENSG00000115520.41075.12830585.462700.8768010.345308.89540HepG2ASCC1
COQ10BENSG00000115520.4639.39190416.062400.619804.281003.18480HepG2BCLAF1
COQ10BENSG00000115520.4635.26900465.105700.449703.128502.49600HepG2BOP1
COQ10BENSG00000115520.4739.09260365.483301.0158015.4692013.90240HepG2CALR
COQ10BENSG00000115520.4683.15110469.681200.540406.700105.74690HepG2CKAP4
COQ10BENSG00000115520.4258.86880427.00740-0.722004.498803.63980HepG2CPSF6
COQ10BENSG00000115520.4562.64040441.205900.350702.392601.45000HepG2YBX3
COQ10BENSG00000115520.4519.29530346.914600.581903.537802.77810HepG2DDX21
COQ10BENSG00000115520.4620.25840440.497900.493602.683201.41260HepG2DDX27
COQ10BENSG00000115520.4520.68240356.646200.545803.265801.75060HepG2DDX28
COQ10BENSG00000115520.41883.44700677.813801.4743029.8505028.03860HepG2DDX3X
COQ10BENSG00000115520.4623.03520470.779100.404202.001201.33210HepG2DDX55
COQ10BENSG00000115520.41106.31810582.224900.9260010.079608.98040HepG2DDX6
COQ10BENSG00000115520.4697.54110449.445800.634007.731306.70740HepG2DKC1
COQ10BENSG00000115520.4381.72720270.194200.498402.623101.54080HepG2EFTUD2
COQ10BENSG00000115520.4505.61830319.149300.663703.649902.36770HepG2AGO1
COQ10BENSG00000115520.4393.75790263.108800.581503.177502.21600HepG2EIF3D
COQ10BENSG00000115520.41024.11400602.256700.765805.830204.85640HepG2EIF4B
COQ10BENSG00000115520.4825.32340605.689200.446304.360003.35270HepG2EIF4G1
COQ10BENSG00000115520.41184.35770833.266700.507207.201606.30810HepG2ETF1
COQ10BENSG00000115520.4746.11530578.956200.365802.034001.46050HepG2G3BP1
COQ10BENSG00000115520.4272.60490437.36810-0.682004.883904.05790HepG2HNRNPA1
COQ10BENSG00000115520.4770.16970564.260900.448704.360203.23220HepG2HNRNPA2B1
COQ10BENSG00000115520.4738.43180461.969700.676604.739903.93850HepG2HNRNPLL
COQ10BENSG00000115520.4285.55230465.77980-0.705904.194202.67100HepG2HSPD1
COQ10BENSG00000115520.41078.97450588.504800.8744010.411209.18930HepG2IGF2BP2
COQ10BENSG00000115520.4815.80870590.954600.465102.587201.78600HepG2LARP4
COQ10BENSG00000115520.4555.47740406.844100.449203.398902.14260HepG2LARP7
COQ10BENSG00000115520.4641.82310408.333400.652305.604303.24360HepG2LSM11
COQ10BENSG00000115520.4927.49300624.304900.571004.593303.75380HepG2MAGOH
COQ10BENSG00000115520.41280.50230642.600700.9946012.9463011.63450HepG2NCBP2
COQ10BENSG00000115520.41040.04560562.666800.886206.024204.67660HepG2PABPC1
COQ10BENSG00000115520.41039.22300572.305400.860509.739208.40330HepG2PABPC4
COQ10BENSG00000115520.4824.36080525.374300.649809.133808.13510HepG2PCBP1
COQ10BENSG00000115520.4778.14670405.310000.940907.557805.92400HepG2PCBP2
COQ10BENSG00000115520.4273.50580431.04670-0.656305.846304.80650HepG2PPIL4
COQ10BENSG00000115520.4215.38650333.65420-0.631404.813003.82420HepG2PRPF4
COQ10BENSG00000115520.4714.62030363.179700.9764010.140808.71570HepG2PRPF8
COQ10BENSG00000115520.4999.36500534.553800.9026014.7719013.70320HepG2PTBP1
COQ10BENSG00000115520.4971.12140581.185900.740607.039706.14630HepG2PUF60
COQ10BENSG00000115520.4821.63510616.921300.413303.398502.75500HepG2PUM1
COQ10BENSG00000115520.4691.34260478.492800.530806.373105.50720HepG2PUS1
COQ10BENSG00000115520.4872.50600579.007900.591506.496405.59670HepG2QKI
COQ10BENSG00000115520.4861.50560391.166301.139008.486007.29400HepG2RAVER1
COQ10BENSG00000115520.41356.59950696.447800.9618021.7340020.56080HepG2RBM22
COQ10BENSG00000115520.41053.03390525.459301.0028016.5357014.97060HepG2RBM25
COQ10BENSG00000115520.4737.72640594.935500.310302.184401.69200HepG2NELFE
COQ10BENSG00000115520.4866.60730574.679500.592505.377304.46830HepG2RPLP0
COQ10BENSG00000115520.4693.39420452.474400.615705.637704.52010HepG2RPS2
COQ10BENSG00000115520.4666.03870461.827400.528203.222102.05670HepG2RPS5
COQ10BENSG00000115520.4775.22000359.261101.1095012.0293010.57540HepG2RRP9
COQ10BENSG00000115520.4332.80060430.37910-0.370902.477201.86180HepG2SAFB2
COQ10BENSG00000115520.4473.46510256.948400.881707.298905.79170HepG2SERBP1
COQ10BENSG00000115520.41080.53300463.148501.2221014.6308013.01040HepG2SF3A3
COQ10BENSG00000115520.4700.72590457.282400.615705.348904.39040HepG2SF3B1
COQ10BENSG00000115520.41062.69900556.600800.9329016.2385014.98730HepG2SF3B4
COQ10BENSG00000115520.4575.35150398.665800.529202.854001.88220HepG2SMNDC1
COQ10BENSG00000115520.41098.94480508.798401.110904.432503.43280HepG2SNRNP70
COQ10BENSG00000115520.41591.71460786.596201.0168032.5188031.29630HepG2SRFBP1
COQ10BENSG00000115520.41074.04490580.945700.8865017.5688016.59240HepG2SRSF1
COQ10BENSG00000115520.4934.94680573.796600.704205.927405.06160HepG2SRSF5
COQ10BENSG00000115520.4653.15890524.105700.317502.364301.71720HepG2SRSF7
COQ10BENSG00000115520.4810.41470472.608700.777908.454807.58350HepG2SRSF9
COQ10BENSG00000115520.4805.91930682.924000.238801.740101.31030HepG2SSB
COQ10BENSG00000115520.4677.59280365.545400.890306.219404.44660HepG2SUB1
COQ10BENSG00000115520.4892.13490652.598900.451005.180304.37470HepG2SUCLG1
COQ10BENSG00000115520.4825.52820468.656700.816707.156906.14990HepG2SUPV3L1
COQ10BENSG00000115520.4644.45570522.107200.303601.979501.49160HepG2TAF15
COQ10BENSG00000115520.4580.77600450.168300.367402.116801.47070HepG2TARDBP
COQ10BENSG00000115520.4491.70390314.126200.646304.016702.84220HepG2TFIP11
COQ10BENSG00000115520.4669.37340479.819100.480203.993002.99540HepG2TIA1
COQ10BENSG00000115520.4875.22510426.376801.0374013.5033012.07890HepG2U2AF1
COQ10BENSG00000115520.4906.22880600.908000.592604.075803.04990HepG2UBE2L3
COQ10BENSG00000115520.4565.39670410.740800.460904.260803.42430HepG2UPF1
COQ10BENSG00000115520.4599.82230384.597000.641103.490102.05130HepG2XRCC5
COQ10BENSG00000115520.4741.77800430.147700.786105.669404.18540HepG2XRCC6
COQ10BENSG00000115520.4418.58940329.284100.346102.168301.56320HepG2ZC3H8
COQ10BENSG00000115520.4818.33330451.737800.8571017.3668016.29030HepG2ZNF622
COQ10BENSG00000115520.4479.12300295.383700.697706.804105.97180K562AGGF1
COQ10BENSG00000115520.4507.94600307.359300.724606.289105.27590K562AKAP8L
COQ10BENSG00000115520.4619.57790431.135200.523003.694603.03620K562AQR
COQ10BENSG00000115520.4441.28350322.492500.452303.180902.19730K562ATP5C1
COQ10BENSG00000115520.4383.65500241.146300.669803.177402.41070K562G3BP2
COQ10BENSG00000115520.4381.10830212.631800.841703.092001.78150K562HNRNPA2B1
COQ10BENSG00000115520.4456.65600326.187800.485302.805201.97360K562KIF1C
COQ10BENSG00000115520.4476.21010256.127400.894602.553401.71350K562NAA15
COQ10BENSG00000115520.4681.57550490.240500.475303.253401.62060K562NOL12
COQ10BENSG00000115520.4306.57520185.908500.721502.208301.34440K562PABPN1
COQ10BENSG00000115520.4329.08480159.643201.043507.387106.16420K562PRPF8
COQ10BENSG00000115520.4691.03970488.974300.498903.492302.57820K562PUF60
COQ10BENSG00000115520.4526.75600304.821700.789106.442105.65300K562PUS1
COQ10BENSG00000115520.4491.14710296.998200.725605.232904.43980K562RBM15
COQ10BENSG00000115520.4102.56140162.61890-0.665002.121201.41010K562RPS19
COQ10BENSG00000115520.4178.20710272.15940-0.610902.541401.58650K562RPS3
COQ10BENSG00000115520.4272.10180163.233300.737103.301401.84910K562RRP9
COQ10BENSG00000115520.4379.33360238.914300.666905.476804.35720K562SF3A3
COQ10BENSG00000115520.4332.73350250.768700.407902.177601.41930K562SF3B4
COQ10BENSG00000115520.4386.89910241.427000.680305.458104.33450K562U2AF2
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for COQ10B is not available on ENCORE database.





2 RBPs can affect the splicing of COQ10B :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SECOQ10BENSG00000115520.4chr2+198324655198324805198318146198318388198327262198327455-0.165000.002800.04782excludedHepG2U2AF1
MXECOQ10BENSG00000115520.4chr2+1983272621983274551983347931983348951983182161983183881983384801983388920.078000.006310.084791includedHepG2U2AF1
MXECOQ10BENSG00000115520.4chr2+198327262198327455198334793198334895198324655198324805198338480198340032-0.227000.007030.040512includedHepG2U2AF2

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for COQ10B is not avaliable on ENCORE database.