CLTB

General Information

Gene Name       : CLTB
Gene ID             : ENSG00000175416.12
Essential Gene : No

Functions

Localization

Domains (AlphaFold: CLTB)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878CLTBENSG00000175416.122.8712.557.71ENCSR000AEF
HepG2CLTBENSG00000175416.1226.7310.9518.84ENCSR985KAT
K562CLTBENSG00000175416.1240.3621.1230.74ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for CLTB is not avaliable on ENCORE database.



Proteins bound to RNA
  • CLTB RNA is bound by 4 proteins.  







eCLIP assay for CLTB is not avaliable on ENCORE database.





4 proteins are bound to CLTB RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr5175819575175819689-3'-UTR,intron-Distal,intron-Proximal3.328133.87559K562YBX3
chr5175843442175843519-5'-UTR,intron-Distal4.453438.20930HepG2DDX3X
chr5175843231175843374-5'-UTR,CDS,intron-Distal,intron-Proximal3.932486.59840HepG2LARP4
chr5175843364175843442-5'-UTR,intron-Distal3.397754.00968HepG2DDX3X
chr5175843204175843332-CDS,intron-Distal,intron-Proximal4.059074.21087HepG2GRWD1
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for CLTB is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for CLTB is not available on ENCORE database.

  • 113 RBPs can affect the levels of CLTB.  








The Knockdown/knockout RNA-Seq assay for CLTB is not available on ENCORE database.





113 RBPs can affect the gene expression of CLTB :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
CLTBENSG00000175416.8694.77440224.304501.6310040.4619038.80580HepG2ACO1
CLTBENSG00000175416.8997.57460235.622002.0819015.4983014.34430HepG2AKAP1
CLTBENSG00000175416.8508.36330217.005201.2280012.5090010.49410HepG2AKAP8
CLTBENSG00000175416.8361.80180225.331600.683005.681504.61860HepG2AKAP8L
CLTBENSG00000175416.8333.32090194.938900.773804.614703.61300HepG2ASCC1
CLTBENSG00000175416.8995.38790299.932501.7305054.4264052.09740HepG2AUH
CLTBENSG00000175416.8814.70590387.689001.0713015.1424013.89720HepG2BOP1
CLTBENSG00000175416.8256.53260151.597900.758804.659703.69020HepG2CALR
CLTBENSG00000175416.8503.39580339.615400.567702.991101.97610HepG2CCAR1
CLTBENSG00000175416.8328.86580224.223600.552503.956903.18890HepG2CKAP4
CLTBENSG00000175416.8304.40990180.967900.750203.222502.39200HepG2CNOT7
CLTBENSG00000175416.8198.80900355.93010-0.840205.708904.75490HepG2CPSF6
CLTBENSG00000175416.8532.02950196.234801.4388025.5657024.01710HepG2CELF1
CLTBENSG00000175416.8182.71770119.594200.611402.342801.71160HepG2DDX21
CLTBENSG00000175416.8155.61100225.66830-0.536302.007801.46620HepG2DDX3X
CLTBENSG00000175416.8166.4971097.125000.777503.236401.76780HepG2DDX52
CLTBENSG00000175416.8445.15030188.871401.236806.722305.57940HepG2DDX55
CLTBENSG00000175416.81184.71840193.947302.6107058.5937056.34100HepG2DDX6
CLTBENSG00000175416.8222.22920113.267800.972206.539805.49300HepG2DNAJC21
CLTBENSG00000175416.8192.07110112.263300.774704.539203.73970HepG2DNAJC2
CLTBENSG00000175416.8294.99570115.856101.348309.408607.83500HepG2EEF2
CLTBENSG00000175416.8215.4551096.558701.157804.429003.02270HepG2EFTUD2
CLTBENSG00000175416.8492.28840186.353401.4014015.3490014.02220HepG2EIF2S1
CLTBENSG00000175416.8200.4722094.034401.092005.688904.42370HepG2EIF3D
CLTBENSG00000175416.8472.11910200.555801.235009.483708.24890HepG2EIF4B
CLTBENSG00000175416.8771.65290344.349301.1640023.0012021.55470HepG2ETF1
CLTBENSG00000175416.8500.73510219.157001.1920014.9471013.10450HepG2EWSR1
CLTBENSG00000175416.8141.6390084.072900.752402.905601.70740HepG2FAM120A
CLTBENSG00000175416.81202.59540298.237702.0115011.6793010.25230HepG2FIP1L1
CLTBENSG00000175416.8223.58320132.890200.750502.735701.62520HepG2FUS
CLTBENSG00000175416.8351.75400207.877800.758704.615703.73900HepG2FXR1
CLTBENSG00000175416.8463.84440192.765701.2667012.5879011.22320HepG2G3BP1
CLTBENSG00000175416.8144.8439083.721100.790702.995802.06120HepG2GEMIN5
CLTBENSG00000175416.8251.67540119.161301.078505.935104.42260HepG2GNB2L1
CLTBENSG00000175416.8297.44070214.127100.474002.861901.86880HepG2HDGF
CLTBENSG00000175416.8284.24780153.217500.891503.357001.84350HepG2HNRNPA0
CLTBENSG00000175416.8335.38600149.599001.164608.780406.17190HepG2HNRNPAB
CLTBENSG00000175416.8384.15260205.711000.901007.273805.84220HepG2HNRNPM
CLTBENSG00000175416.8270.07390126.354201.095809.863608.77550HepG2HNRNPU
CLTBENSG00000175416.8328.65950195.916700.746303.362202.62460HepG2IGF2BP2
CLTBENSG00000175416.8783.54110358.907601.1263011.496809.80520HepG2LARP4
CLTBENSG00000175416.8275.27320116.735301.237509.586507.59970HepG2LARP7
CLTBENSG00000175416.8315.86990207.951000.603002.976802.29770HepG2MAGOH
CLTBENSG00000175416.8550.27620209.092801.3959014.5814013.21600HepG2MATR3
CLTBENSG00000175416.8279.8708098.404901.507908.137206.43030HepG2METAP2
CLTBENSG00000175416.8560.01060241.278401.2147014.7141013.00690HepG2MSI2
CLTBENSG00000175416.8239.62820392.65640-0.712503.145702.10640HepG2MTPAP
CLTBENSG00000175416.8331.27790209.201700.663004.891003.88120HepG2NOL12
CLTBENSG00000175416.8114.02170341.41550-1.5822011.7168010.27760HepG2NSUN2
CLTBENSG00000175416.8691.71460165.464702.0636022.9281020.41150HepG2PABPC1
CLTBENSG00000175416.8318.21060190.498500.740104.253403.36970HepG2PABPC4
CLTBENSG00000175416.8263.54290125.070801.075208.929907.54940HepG2PARN
CLTBENSG00000175416.8231.59480145.533500.670202.044501.34600HepG2PRPF8
CLTBENSG00000175416.8415.40430215.996000.9434010.245809.32280HepG2PTBP1
CLTBENSG00000175416.8379.26650199.709000.925208.064007.11810HepG2PUF60
CLTBENSG00000175416.8637.69960212.009001.5887039.7377038.03070HepG2PUM1
CLTBENSG00000175416.8535.96690211.848501.339009.737908.51890HepG2PUM2
CLTBENSG00000175416.8324.40500228.464000.505703.316002.65710HepG2PUS1
CLTBENSG00000175416.8821.34450121.308402.7592036.4134034.16820HepG2RAVER1
CLTBENSG00000175416.8475.64770304.632500.642705.422404.26940HepG2RBM15
CLTBENSG00000175416.81174.98700287.815102.0293013.8449012.86290HepG2RBM22
CLTBENSG00000175416.8226.21460140.762500.684302.868701.85980HepG2RBM27
CLTBENSG00000175416.8362.82280240.374100.593904.072203.43860HepG2NELFE
CLTBENSG00000175416.8637.77940396.158200.686904.868703.99630HepG2RPLP0
CLTBENSG00000175416.8314.5124091.514601.7809018.4696017.08660HepG2RPS19
CLTBENSG00000175416.8275.81930129.822701.087107.183505.93530HepG2RPS2
CLTBENSG00000175416.8287.34270132.518301.116507.754305.97420HepG2RPS5
CLTBENSG00000175416.8329.50510143.946501.194704.593203.61030HepG2RRP9
CLTBENSG00000175416.8210.4879091.825501.196706.932405.46080HepG2SERBP1
CLTBENSG00000175416.8830.81480258.522901.684107.733506.56630HepG2SF3A3
CLTBENSG00000175416.8371.55380224.860900.724405.844805.03930HepG2SF3B4
CLTBENSG00000175416.8252.83400191.508300.400702.033501.41450HepG2SLBP
CLTBENSG00000175416.8474.75600131.224401.8551036.2556034.38190HepG2SMN1
CLTBENSG00000175416.8390.77550124.059301.6552011.421509.41560HepG2SMNDC1
CLTBENSG00000175416.8166.10190424.09890-1.352309.857008.38980HepG2SNRNP70
CLTBENSG00000175416.82322.06210325.081502.83640211.35720208.78190HepG2SRFBP1
CLTBENSG00000175416.8584.15420410.079900.510302.221901.33690HepG2SRSF3
CLTBENSG00000175416.8339.99930197.194400.785806.844105.92010HepG2SRSF5
CLTBENSG00000175416.8266.77920158.299000.752903.980002.63760HepG2STIP1
CLTBENSG00000175416.8378.10880224.255100.753607.229106.30420HepG2SUCLG1
CLTBENSG00000175416.8403.69420238.279800.760504.298202.63120HepG2SUGP2
CLTBENSG00000175416.8328.94390201.302300.708404.466403.28550HepG2SUPT6H
CLTBENSG00000175416.8395.71480187.970601.073905.902904.97250HepG2SUPV3L1
CLTBENSG00000175416.8116.19930210.99120-0.860603.747203.11120HepG2TAF15
CLTBENSG00000175416.8245.16580125.960800.960704.469803.24810HepG2TFIP11
CLTBENSG00000175416.8281.67790122.782001.1978010.324509.46530HepG2TIAL1
CLTBENSG00000175416.8320.14140123.873901.3697016.1830014.97450HepG2TRIM56
CLTBENSG00000175416.8802.91240255.068501.6543026.0939024.10190HepG2U2AF1
CLTBENSG00000175416.8796.10640238.781401.737207.348405.65990HepG2U2AF2
CLTBENSG00000175416.8425.63540206.543201.043107.543306.13570HepG2UBE2L3
CLTBENSG00000175416.8317.69850111.007201.5169013.2186011.58360HepG2UCHL5
CLTBENSG00000175416.8374.56800229.269300.708106.377705.38920HepG2UPF1
CLTBENSG00000175416.8423.29030221.352000.935205.415504.62500HepG2UTP3
CLTBENSG00000175416.8919.18060252.153701.8659066.7250064.97380HepG2ZNF622
CLTBENSG00000175416.8451.02340329.320500.453602.688601.52580K562AARS
CLTBENSG00000175416.81061.78640749.317000.502707.171806.32140K562AGGF1
CLTBENSG00000175416.81106.89720823.432500.426703.436402.31350K562AKAP8
CLTBENSG00000175416.8953.87000779.709700.290802.023801.46300K562AKAP8L
CLTBENSG00000175416.8421.79300692.02890-0.714303.944302.63270K562CNOT7
CLTBENSG00000175416.8824.455601044.31320-0.341002.944901.93980K562CELF1
CLTBENSG00000175416.8323.00800218.483400.563903.744902.18100K562DDX27
CLTBENSG00000175416.8381.23440249.889000.609302.722801.45470K562EEF2
CLTBENSG00000175416.8367.05350241.377100.604602.776501.86220K562EFTUD2
CLTBENSG00000175416.8252.37100154.174100.710904.334103.34910K562EIF3G
CLTBENSG00000175416.8394.94640295.526700.418302.714501.57720K562EIF4B
CLTBENSG00000175416.8693.91140849.23110-0.291402.273001.41800K562EIF4G2
CLTBENSG00000175416.8615.72840389.793200.659505.757304.50390K562FIP1L1
CLTBENSG00000175416.8514.38660341.280600.591805.314404.51330K562FXR1
CLTBENSG00000175416.847.00120124.06510-1.400305.911204.79160K562G3BP2
CLTBENSG00000175416.8925.43730665.461800.475704.147603.22530K562GRSF1
CLTBENSG00000175416.8427.22670598.99200-0.487503.849302.58530K562HNRNPA1
CLTBENSG00000175416.8264.35270360.18520-0.446302.291101.74070K562HNRNPC
CLTBENSG00000175416.8566.09700320.601500.820206.724805.17610K562HNRNPM
CLTBENSG00000175416.8681.40600528.489300.366502.217301.50250K562HSPD1
CLTBENSG00000175416.8353.13410631.53370-0.838604.677602.79120K562ILF2
CLTBENSG00000175416.8358.10500246.113500.541003.502102.55070K562MAGOH
CLTBENSG00000175416.81049.02470792.083600.405203.217002.03270K562MAK16
CLTBENSG00000175416.8349.41750245.605800.508502.336401.49510K562MATR3
CLTBENSG00000175416.8503.21150627.77740-0.319102.279701.54380K562MTPAP
CLTBENSG00000175416.8571.48830697.47360-0.287402.391401.69340K562NSUN2
CLTBENSG00000175416.8693.50880442.479400.648205.849204.58150K562PPIG
CLTBENSG00000175416.8393.79040234.890500.745302.855902.09580K562PRPF8
CLTBENSG00000175416.8521.61350239.118801.1252015.1535013.66360K562PTBP1
CLTBENSG00000175416.81170.78900773.176500.598505.476004.74390K562PUS1
CLTBENSG00000175416.81031.07100753.411600.452505.189304.40010K562RBM15
CLTBENSG00000175416.8334.06350229.256200.543103.160802.25740K562RBM22
CLTBENSG00000175416.8348.02530241.262500.528502.981901.84320K562NELFE
CLTBENSG00000175416.8415.07310239.183200.795104.745903.67350K562RPS19
CLTBENSG00000175416.8532.00960688.29310-0.371603.104302.24070K562SF3A3
CLTBENSG00000175416.8386.72290234.422300.722104.857003.92490K562SRSF1
CLTBENSG00000175416.8359.28890221.409600.698303.200802.05560K562SRSF5
CLTBENSG00000175416.8360.92360511.44660-0.502903.207901.72690K562SSRP1
CLTBENSG00000175416.8373.44640237.237300.654504.284703.39750K562TARDBP
CLTBENSG00000175416.8395.71530228.845700.790006.505805.17150K562TIA1
CLTBENSG00000175416.8455.06090632.80350-0.475703.754402.73440K562WDR3
CLTBENSG00000175416.8596.88180817.28510-0.453403.742802.71140K562ZC3H8
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for CLTB is not available on ENCORE database.





5 RBPs can affect the splicing of CLTB :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SECLTBENSG00000175416.8chr5-1758234791758235331758194551758199461758246071758247190.063000.000310.00757includedHepG2U2AF1
SECLTBENSG00000175416.8chr5-1758234791758235331758194551758199461758246071758247190.055000.000470.04327includedHepG2QKI
SECLTBENSG00000175416.8chr5-1758234791758235331758194551758199461758246071758247190.087000.000040.00080includedHepG2U2AF2
SECLTBENSG00000175416.8chr5-1758331571758337091758249301758250481758372571758373040.185000.000250.02546includedHepG2DDX3X
SECLTBENSG00000175416.8chr5-175833157175833709175824930175825048175837257175837304-0.067000.000180.03684excludedHepG2RBM15

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for CLTB is not avaliable on ENCORE database.