The Knockdown/knockout RNA-Seq assay for CLN3 is not available on ENCORE database.
72 RBPs can affect the gene expression of CLN3 :
Gene Name | Gene ID | KDMean | CNMean | log2(fold change) * | -log(pval) ** | -log(padj) ** | Cell Line | Affected by RBP | Bound by RBP |
CLN3 | ENSG00000188603.12 | 499.99610 | 832.28060 | -0.73520 | 12.65010 | 11.55190 | HepG2 | ACO1 | |
CLN3 | ENSG00000188603.12 | 1938.42280 | 1252.28370 | 0.63020 | 3.98750 | 3.36630 | HepG2 | AKAP1 | |
CLN3 | ENSG00000188603.12 | 743.25380 | 1036.06530 | -0.47920 | 2.07120 | 1.38780 | HepG2 | ASCC1 | |
CLN3 | ENSG00000188603.12 | 874.02530 | 324.44230 | 1.42960 | 23.81370 | 22.33300 | HepG2 | BOP1 | |
CLN3 | ENSG00000188603.12 | 2065.00350 | 984.36380 | 1.06880 | 18.65550 | 16.85480 | HepG2 | CIRBP | |
CLN3 | ENSG00000188603.12 | 931.95120 | 443.22590 | 1.07210 | 8.84140 | 7.50040 | HepG2 | CNOT7 | |
CLN3 | ENSG00000188603.12 | 573.30700 | 725.62770 | -0.33990 | 2.49950 | 1.44970 | HepG2 | CPSF7 | |
CLN3 | ENSG00000188603.12 | 363.55110 | 530.12680 | -0.54420 | 2.84330 | 1.46180 | HepG2 | CSTF2T | |
CLN3 | ENSG00000188603.12 | 1103.83790 | 873.24270 | 0.33800 | 4.15140 | 3.27200 | HepG2 | DAZAP1 | |
CLN3 | ENSG00000188603.12 | 434.83810 | 558.88050 | -0.36210 | 2.23000 | 1.42070 | HepG2 | DDX24 | |
CLN3 | ENSG00000188603.12 | 1698.70640 | 1199.39050 | 0.50200 | 3.53240 | 2.83510 | HepG2 | DDX3X | |
CLN3 | ENSG00000188603.12 | 716.58590 | 524.66020 | 0.44970 | 3.43830 | 2.35190 | HepG2 | DHX30 | |
CLN3 | ENSG00000188603.12 | 1015.98220 | 796.27990 | 0.35140 | 3.61760 | 2.86140 | HepG2 | DKC1 | |
CLN3 | ENSG00000188603.12 | 700.34340 | 543.97330 | 0.36440 | 3.00600 | 2.27780 | HepG2 | DNAJC21 | |
CLN3 | ENSG00000188603.12 | 707.20130 | 539.16270 | 0.39130 | 4.21320 | 3.44040 | HepG2 | DNAJC2 | |
CLN3 | ENSG00000188603.12 | 364.02840 | 525.89640 | -0.53070 | 2.90370 | 1.76620 | HepG2 | AGO1 | |
CLN3 | ENSG00000188603.12 | 1780.26300 | 1094.32230 | 0.70200 | 6.96590 | 5.95210 | HepG2 | EIF4A3 | |
CLN3 | ENSG00000188603.12 | 583.73630 | 1065.91330 | -0.86870 | 4.68260 | 3.80190 | HepG2 | EIF4B | |
CLN3 | ENSG00000188603.12 | 746.81370 | 1024.51630 | -0.45610 | 1.97290 | 1.40720 | HepG2 | G3BP1 | |
CLN3 | ENSG00000188603.12 | 602.72180 | 410.31110 | 0.55470 | 2.88690 | 1.75070 | HepG2 | GRSF1 | |
CLN3 | ENSG00000188603.12 | 748.82980 | 549.18460 | 0.44720 | 3.36990 | 2.66500 | HepG2 | HNRNPA1 | |
CLN3 | ENSG00000188603.12 | 919.10130 | 705.70890 | 0.38110 | 4.10010 | 3.24490 | HepG2 | HNRNPF | |
CLN3 | ENSG00000188603.12 | 653.12500 | 322.19170 | 1.01930 | 10.87990 | 9.73220 | HepG2 | HNRNPLL | |
CLN3 | ENSG00000188603.12 | 948.94980 | 606.82550 | 0.64500 | 7.42200 | 6.46670 | HepG2 | HNRNPU | |
CLN3 | ENSG00000188603.12 | 1072.40130 | 694.92230 | 0.62580 | 8.15770 | 6.97480 | HepG2 | IGF2BP1 | |
CLN3 | ENSG00000188603.12 | 808.02150 | 619.85260 | 0.38240 | 4.44780 | 3.53760 | HepG2 | ILF2 | |
CLN3 | ENSG00000188603.12 | 765.07110 | 1111.27990 | -0.53860 | 2.44320 | 1.84780 | HepG2 | MATR3 | |
CLN3 | ENSG00000188603.12 | 1532.88440 | 1137.36520 | 0.43050 | 2.81630 | 2.17740 | HepG2 | NCBP2 | |
CLN3 | ENSG00000188603.12 | 476.76130 | 600.65630 | -0.33330 | 2.49530 | 1.68670 | HepG2 | PARN | |
CLN3 | ENSG00000188603.12 | 865.06110 | 1079.31350 | -0.31920 | 3.06740 | 2.49690 | HepG2 | PTBP1 | |
CLN3 | ENSG00000188603.12 | 1150.31190 | 826.58040 | 0.47670 | 3.00890 | 2.39180 | HepG2 | PUF60 | |
CLN3 | ENSG00000188603.12 | 1169.43110 | 877.44940 | 0.41430 | 6.31530 | 5.49550 | HepG2 | PUM1 | |
CLN3 | ENSG00000188603.12 | 1259.22590 | 847.73910 | 0.57070 | 10.70490 | 9.63000 | HepG2 | PUS1 | |
CLN3 | ENSG00000188603.12 | 689.92260 | 1168.83210 | -0.76060 | 12.22750 | 11.05180 | HepG2 | QKI | |
CLN3 | ENSG00000188603.12 | 814.28800 | 1060.82470 | -0.38160 | 3.15330 | 2.43870 | HepG2 | RBM25 | |
CLN3 | ENSG00000188603.12 | 905.88340 | 614.34330 | 0.56020 | 3.48550 | 2.29670 | HepG2 | RCC2 | |
CLN3 | ENSG00000188603.12 | 842.20640 | 1201.13680 | -0.51220 | 7.21560 | 6.41320 | HepG2 | NELFE | |
CLN3 | ENSG00000188603.12 | 821.60810 | 1118.76010 | -0.44540 | 5.56230 | 4.72600 | HepG2 | RECQL | |
CLN3 | ENSG00000188603.12 | 1216.36910 | 760.21430 | 0.67800 | 3.27600 | 2.54250 | HepG2 | RPLP0 | |
CLN3 | ENSG00000188603.12 | 703.27930 | 445.13230 | 0.65980 | 4.31180 | 3.31280 | HepG2 | RPS3A | |
CLN3 | ENSG00000188603.12 | 721.85660 | 540.40630 | 0.41760 | 4.37640 | 3.59890 | HepG2 | SAFB2 | |
CLN3 | ENSG00000188603.12 | 498.41290 | 815.40420 | -0.71020 | 4.98590 | 4.06290 | HepG2 | SF3A3 | |
CLN3 | ENSG00000188603.12 | 853.99680 | 1123.62800 | -0.39590 | 4.49170 | 3.76560 | HepG2 | SF3B4 | |
CLN3 | ENSG00000188603.12 | 778.38230 | 1126.82210 | -0.53370 | 8.91090 | 8.15230 | HepG2 | SRFBP1 | |
CLN3 | ENSG00000188603.12 | 892.22850 | 1172.85570 | -0.39450 | 4.63030 | 4.05800 | HepG2 | SRSF1 | |
CLN3 | ENSG00000188603.12 | 855.90310 | 693.33410 | 0.30380 | 2.73410 | 2.04200 | HepG2 | SRSF7 | |
CLN3 | ENSG00000188603.12 | 482.88630 | 954.20750 | -0.98260 | 22.01330 | 20.72890 | HepG2 | SRSF9 | |
CLN3 | ENSG00000188603.12 | 1278.02930 | 978.33840 | 0.38540 | 5.22190 | 4.56090 | HepG2 | SSB | |
CLN3 | ENSG00000188603.12 | 647.04760 | 1054.29520 | -0.70430 | 10.46970 | 9.49070 | HepG2 | TAF15 | |
CLN3 | ENSG00000188603.12 | 567.98480 | 314.09380 | 0.85460 | 8.01300 | 6.86300 | HepG2 | TARDBP | |
CLN3 | ENSG00000188603.12 | 662.59400 | 968.66160 | -0.54790 | 6.07730 | 4.84390 | HepG2 | TIA1 | |
CLN3 | ENSG00000188603.12 | 1237.77180 | 589.65330 | 1.06970 | 21.54650 | 20.39600 | HepG2 | TIAL1 | |
CLN3 | ENSG00000188603.12 | 503.86100 | 761.20570 | -0.59530 | 3.04440 | 2.38690 | HepG2 | U2AF1 | |
CLN3 | ENSG00000188603.12 | 508.96950 | 366.17380 | 0.47500 | 2.33780 | 1.63900 | HepG2 | UCHL5 | |
CLN3 | ENSG00000188603.12 | 500.35240 | 723.14140 | -0.53130 | 6.39560 | 5.40640 | HepG2 | UPF1 | |
CLN3 | ENSG00000188603.12 | 1003.04790 | 743.26910 | 0.43230 | 5.02980 | 3.65850 | HepG2 | UTP18 | |
CLN3 | ENSG00000188603.12 | 404.01720 | 309.69110 | 0.38350 | 1.89810 | 1.35300 | K562 | AKAP8L | |
CLN3 | ENSG00000188603.12 | 873.24820 | 660.21410 | 0.40340 | 2.98320 | 1.69400 | K562 | APOBEC3C | |
CLN3 | ENSG00000188603.12 | 566.79920 | 380.91960 | 0.57330 | 2.58420 | 1.56480 | K562 | CNOT7 | |
CLN3 | ENSG00000188603.12 | 325.54660 | 232.61090 | 0.48480 | 2.55930 | 1.80430 | K562 | CPSF6 | |
CLN3 | ENSG00000188603.12 | 497.83510 | 362.26380 | 0.45850 | 2.50020 | 1.63500 | K562 | EFTUD2 | |
CLN3 | ENSG00000188603.12 | 252.79900 | 184.40990 | 0.45500 | 2.00680 | 1.32000 | K562 | EIF3G | |
CLN3 | ENSG00000188603.12 | 416.61000 | 293.50250 | 0.50520 | 3.10850 | 2.24020 | K562 | EIF4A3 | |
CLN3 | ENSG00000188603.12 | 479.79190 | 354.25750 | 0.43750 | 2.63400 | 1.80680 | K562 | FIP1L1 | |
CLN3 | ENSG00000188603.12 | 333.34730 | 236.69600 | 0.49390 | 2.36870 | 1.57610 | K562 | FMR1 | |
CLN3 | ENSG00000188603.12 | 589.42070 | 305.22850 | 0.94930 | 12.85000 | 11.64340 | K562 | FXR1 | |
CLN3 | ENSG00000188603.12 | 30.55950 | 107.86680 | -1.81960 | 7.70270 | 6.39930 | K562 | G3BP2 | |
CLN3 | ENSG00000188603.12 | 1206.08780 | 861.45860 | 0.48540 | 4.68500 | 3.70300 | K562 | GRSF1 | |
CLN3 | ENSG00000188603.12 | 656.71760 | 480.62300 | 0.45030 | 3.44720 | 2.25060 | K562 | HNRNPL | |
CLN3 | ENSG00000188603.12 | 393.22370 | 224.11170 | 0.81100 | 4.84750 | 3.72660 | K562 | MAGOH | |
CLN3 | ENSG00000188603.12 | 342.04210 | 223.61380 | 0.61310 | 2.47000 | 1.60260 | K562 | MATR3 | |
CLN3 | ENSG00000188603.12 | 573.55660 | 433.67870 | 0.40320 | 3.41110 | 2.51790 | K562 | MTPAP | |
CLN3 | ENSG00000188603.12 | 432.47400 | 628.65200 | -0.53960 | 3.58480 | 2.63790 | K562 | PCBP3 | |
CLN3 | ENSG00000188603.12 | 465.89570 | 217.75980 | 1.09720 | 7.05010 | 6.02640 | K562 | PTBP1 | |
CLN3 | ENSG00000188603.12 | 1083.56010 | 816.36540 | 0.40840 | 3.29200 | 2.40270 | K562 | PUF60 | |
CLN3 | ENSG00000188603.12 | 396.17300 | 307.15740 | 0.36710 | 1.79370 | 1.33800 | K562 | PUS1 | |
CLN3 | ENSG00000188603.12 | 359.22900 | 208.65020 | 0.78370 | 4.19220 | 3.13230 | K562 | RBM22 | |
CLN3 | ENSG00000188603.12 | 166.27650 | 112.17900 | 0.56770 | 2.27730 | 1.50370 | K562 | SF3B4 | |
CLN3 | ENSG00000188603.12 | 376.02550 | 213.50920 | 0.81640 | 5.28900 | 4.31740 | K562 | SRSF1 | |
CLN3 | ENSG00000188603.12 | 637.81550 | 483.66720 | 0.39900 | 2.88420 | 2.04590 | K562 | SYNCRIP | |
CLN3 | ENSG00000188603.12 | 505.08500 | 216.01640 | 1.22530 | 8.41810 | 7.09730 | K562 | TARDBP | |
CLN3 | ENSG00000188603.12 | 311.34950 | 208.39030 | 0.57910 | 2.26870 | 1.53470 | K562 | TIA1 | |
CLN3 | ENSG00000188603.12 | 411.04410 | 301.02630 | 0.44930 | 2.20140 | 1.37580 | K562 | TIAL1 | |
CLN3 | ENSG00000188603.12 | 508.89900 | 367.86830 | 0.46810 | 2.68640 | 1.50140 | K562 | XRN2 | |
Gene Name | Gene ID | KDMean | CNMean | log2(fold change) | -log(pval) | -log(padj) | Cell Line | Affected by RBP | Bound by RBP |
*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".
The Knockdown/knockout RNA-Seq assay for CLN3 is not available on ENCORE database.
34 RBPs can affect the splicing of CLN3 :
Event Type | Gene Name | Gene ID | chr | Strand | ExonStart | ExonEnd | 2ndExonStart | 2ndExonEnd | upstreamES | upstreamEE | downstreamES | downstreamEE | dPSI | p-value | FDR | is_included | Cell Line | Affected by RBP | Bound by RBP |
SE | CLN3 | ENSG00000188603.12 | chr16 | - | 28498982 | 28499062 | | | 28498776 | 28498862 | 28499911 | 28499983 | -0.06500 | 0.00345 | 0.05661 | excluded | HepG2 | U2AF1 | |
SE | CLN3 | ENSG00000188603.12 | chr16 | - | 28498982 | 28499062 | | | 28498776 | 28498862 | 28502802 | 28502913 | -0.14600 | 0.00254 | 0.02677 | excluded | K562 | AQR | |
SE | CLN3 | ENSG00000188603.12 | chr16 | - | 28499911 | 28500121 | | | 28498982 | 28499062 | 28500610 | 28500707 | -0.06500 | 0.00122 | 0.09237 | excluded | HepG2 | SRSF7 | |
SE | CLN3 | ENSG00000188603.12 | chr16 | - | 28502802 | 28502881 | | | 28500610 | 28500707 | 28503034 | 28503156 | -0.27500 | 0.00000 | 0.00000 | excluded | HepG2 | SRSF1 | |
SE | CLN3 | ENSG00000188603.12 | chr16 | - | 28502282 | 28502383 | | | 28500634 | 28500707 | 28502802 | 28502881 | 0.19500 | 0.00009 | 0.00249 | included | K562 | HNRNPC | |
A3SS | CLN3 | ENSG00000188603.12 | chr16 | - | 28498976 | 28499174 | | | 28498976 | 28499062 | 28499911 | 28500121 | 0.08200 | 0.00000 | 0.00003 | longer | K562 | AQR | |
A3SS | CLN3 | ENSG00000188603.12 | chr16 | - | 28502802 | 28502913 | | | 28502802 | 28502881 | 28503034 | 28503156 | 0.07600 | 0.00072 | 0.00520 | longer | K562 | AQR | |
A3SS | CLN3 | ENSG00000188603.12 | chr16 | - | 28489057 | 28489275 | | | 28489057 | 28489198 | 28493425 | 28493519 | 0.08600 | 0.00157 | 0.01043 | longer | K562 | AQR | |
A3SS | CLN3 | ENSG00000188603.12 | chr16 | - | 28497898 | 28498074 | | | 28497898 | 28497971 | 28498776 | 28498862 | 0.07500 | 0.00000 | 0.00000 | longer | K562 | AQR | |
A3SS | CLN3 | ENSG00000188603.12 | chr16 | - | 28499911 | 28500121 | | | 28499911 | 28499983 | 28500610 | 28500707 | 0.10300 | 0.00000 | 0.00000 | longer | K562 | AQR | |
A5SS | CLN3 | ENSG00000188603.12 | chr16 | - | 28502802 | 28503156 | | | 28503034 | 28503156 | 28500610 | 28500707 | -0.41400 | 0.00000 | 0.00000 | shorter | HepG2 | SRSF1 | |
RI | CLN3 | ENSG00000188603.12 | chr16 | - | 28503034 | 28503536 | | | 28503034 | 28503156 | 28503340 | 28503536 | -0.32100 | 0.00120 | 0.08655 | excluded | HepG2 | DDX59 | |
RI | CLN3 | ENSG00000188603.12 | chr16 | - | 28503034 | 28503363 | | | 28503034 | 28503156 | 28503340 | 28503363 | -0.14200 | 0.00014 | 0.01353 | excluded | K562 | DROSHA | |
RI | CLN3 | ENSG00000188603.12 | chr16 | - | 28493647 | 28493993 | | | 28493647 | 28493866 | 28493946 | 28493993 | 0.05300 | 0.00383 | 0.06296 | included | HepG2 | PCBP2 | |
RI | CLN3 | ENSG00000188603.12 | chr16 | - | 28503034 | 28503363 | | | 28503034 | 28503156 | 28503340 | 28503363 | -0.17000 | 0.00543 | 0.07843 | excluded | HepG2 | PCBP2 | |
RI | CLN3 | ENSG00000188603.12 | chr16 | - | 28493425 | 28493703 | | | 28493425 | 28493519 | 28493647 | 28493703 | 0.09100 | 0.00080 | 0.01217 | included | HepG2 | PRPF8 | |
RI | CLN3 | ENSG00000188603.12 | chr16 | - | 28488599 | 28488956 | | | 28488599 | 28488680 | 28488784 | 28488956 | -0.15100 | 0.00055 | 0.00899 | excluded | HepG2 | PRPF8 | |
RI | CLN3 | ENSG00000188603.12 | chr16 | - | 28502802 | 28503156 | | | 28502802 | 28502881 | 28503034 | 28503156 | 0.06900 | 0.00379 | 0.04127 | included | K562 | AGGF1 | |
RI | CLN3 | ENSG00000188603.12 | chr16 | - | 28493425 | 28493703 | | | 28493425 | 28493519 | 28493647 | 28493703 | 0.15700 | 0.00000 | 0.00008 | included | K562 | PRPF8 | |
RI | CLN3 | ENSG00000188603.12 | chr16 | - | 28493647 | 28493866 | | | 28493647 | 28493703 | 28493797 | 28493866 | 0.09200 | 0.00072 | 0.01121 | included | K562 | PRPF8 | |
RI | CLN3 | ENSG00000188603.12 | chr16 | - | 28503034 | 28503363 | | | 28503034 | 28503156 | 28503340 | 28503363 | -0.15900 | 0.00014 | 0.02169 | excluded | HepG2 | DDX55 | |
RI | CLN3 | ENSG00000188603.12 | chr16 | - | 28503034 | 28503363 | | | 28503034 | 28503156 | 28503340 | 28503363 | 0.18800 | 0.00119 | 0.05749 | included | HepG2 | HNRNPA1 | |
RI | CLN3 | ENSG00000188603.12 | chr16 | - | 28493647 | 28493993 | | | 28493647 | 28493866 | 28493946 | 28493993 | 0.06900 | 0.00199 | 0.02116 | included | HepG2 | TAF15 | |
RI | CLN3 | ENSG00000188603.12 | chr16 | - | 28493425 | 28493703 | | | 28493425 | 28493519 | 28493647 | 28493703 | 0.05300 | 0.00757 | 0.06774 | included | K562 | RBM15 | |
RI | CLN3 | ENSG00000188603.12 | chr16 | - | 28493425 | 28493703 | | | 28493425 | 28493519 | 28493647 | 28493703 | 0.05100 | 0.00017 | 0.00528 | included | HepG2 | TIAL1 | |
RI | CLN3 | ENSG00000188603.12 | chr16 | - | 28502802 | 28503156 | | | 28502802 | 28502881 | 28503034 | 28503156 | -0.25500 | 0.00191 | 0.09217 | excluded | K562 | CPSF6 | |
RI | CLN3 | ENSG00000188603.12 | chr16 | - | 28493647 | 28493993 | | | 28493647 | 28493866 | 28493946 | 28493993 | 0.07200 | 0.00074 | 0.00713 | included | HepG2 | SF3B4 | |
RI | CLN3 | ENSG00000188603.12 | chr16 | - | 28503034 | 28503363 | | | 28503034 | 28503156 | 28503340 | 28503363 | -0.15100 | 0.00175 | 0.01476 | excluded | HepG2 | SF3B4 | |
RI | CLN3 | ENSG00000188603.12 | chr16 | - | 28503034 | 28503363 | | | 28503034 | 28503156 | 28503340 | 28503363 | -0.21000 | 0.00036 | 0.00853 | excluded | HepG2 | SRSF9 | |
RI | CLN3 | ENSG00000188603.12 | chr16 | - | 28503034 | 28503363 | | | 28503034 | 28503156 | 28503340 | 28503363 | -0.17300 | 0.00233 | 0.02689 | excluded | HepG2 | HNRNPK | |
RI | CLN3 | ENSG00000188603.12 | chr16 | - | 28493425 | 28493703 | | | 28493425 | 28493519 | 28493647 | 28493703 | 0.13600 | 0.00001 | 0.00022 | included | K562 | EFTUD2 | |
RI | CLN3 | ENSG00000188603.12 | chr16 | - | 28493647 | 28493993 | | | 28493647 | 28493866 | 28493946 | 28493993 | 0.19900 | 0.00000 | 0.00000 | included | K562 | AQR | |
RI | CLN3 | ENSG00000188603.12 | chr16 | - | 28502802 | 28503156 | | | 28502802 | 28502881 | 28503034 | 28503156 | 0.25800 | 0.00000 | 0.00000 | included | K562 | AQR | |
RI | CLN3 | ENSG00000188603.12 | chr16 | - | 28493425 | 28493703 | | | 28493425 | 28493519 | 28493647 | 28493703 | 0.09500 | 0.00033 | 0.00246 | included | K562 | AQR | |
RI | CLN3 | ENSG00000188603.12 | chr16 | - | 28493647 | 28493866 | | | 28493647 | 28493703 | 28493797 | 28493866 | 0.07500 | 0.00013 | 0.00103 | included | K562 | AQR | |
MXE | CLN3 | ENSG00000188603.12 | chr16 | - | 28498982 | 28499062 | 28499911 | 28500121 | 28498776 | 28498862 | 28500610 | 28500707 | 0.10500 | 0.00439 | 0.06558 | 1included | HepG2 | U2AF1 | |
MXE | CLN3 | ENSG00000188603.12 | chr16 | - | 28498982 | 28499062 | 28499911 | 28499983 | 28498776 | 28498862 | 28502802 | 28502881 | 0.13300 | 0.00144 | 0.02821 | 1included | HepG2 | U2AF1 | |
MXE | CLN3 | ENSG00000188603.12 | chr16 | - | 28498982 | 28499062 | 28499911 | 28499983 | 28498776 | 28498862 | 28502802 | 28502881 | 0.07100 | 0.00079 | 0.02417 | 1included | HepG2 | MATR3 | |
MXE | CLN3 | ENSG00000188603.12 | chr16 | - | 28499911 | 28499983 | 28500610 | 28500707 | 28498776 | 28498862 | 28502802 | 28502881 | -0.07600 | 0.00142 | 0.03823 | 2included | HepG2 | MATR3 | |
MXE | CLN3 | ENSG00000261832.1 | chr16 | - | 28499911 | 28499983 | 28502802 | 28502881 | 28498982 | 28499062 | 28503034 | 28503333 | 0.15700 | 0.00177 | 0.03475 | 1included | HepG2 | FTO | |
MXE | CLN3 | ENSG00000188603.12 | chr16 | - | 28498776 | 28498862 | 28500610 | 28500707 | 28495326 | 28495439 | 28502802 | 28502881 | -0.10000 | 0.00102 | 0.08504 | 2included | HepG2 | FUBP3 | |
MXE | CLN3 | ENSG00000261832.1 | chr16 | - | 28499911 | 28499983 | 28500610 | 28500707 | 28498982 | 28499062 | 28503034 | 28503333 | 0.13800 | 0.00000 | 0.00000 | 1included | HepG2 | SRSF1 | |
MXE | CLN3 | ENSG00000188603.12 | chr16 | - | 28500610 | 28500707 | 28502802 | 28502881 | 28499911 | 28499983 | 28503034 | 28503156 | -0.11900 | 0.00099 | 0.02354 | 2included | HepG2 | SRSF1 | |
MXE | CLN3 | ENSG00000188603.12 | chr16 | - | 28500610 | 28500707 | 28502802 | 28502881 | 28498776 | 28498862 | 28503034 | 28503156 | -0.33300 | 0.00000 | 0.00000 | 2included | HepG2 | SRSF1 | |
MXE | CLN3 | ENSG00000188603.12 | chr16 | - | 28500610 | 28500707 | 28502802 | 28502881 | 28498982 | 28499062 | 28503034 | 28503080 | -0.34600 | 0.00000 | 0.00000 | 2included | HepG2 | SRSF1 | |
MXE | CLN3 | ENSG00000261832.1 | chr16 | - | 28499911 | 28499983 | 28502802 | 28502881 | 28498776 | 28498862 | 28503034 | 28503333 | -0.11700 | 0.00199 | 0.04023 | 2included | HepG2 | SRSF1 | |
MXE | CLN3 | ENSG00000188603.12 | chr16 | - | 28500610 | 28500707 | 28502802 | 28502881 | 28498982 | 28499062 | 28503034 | 28503080 | 0.15800 | 0.00015 | 0.03250 | 1included | HepG2 | BCLAF1 | |
MXE | CLN3 | ENSG00000188603.12 | chr16 | - | 28500610 | 28500707 | 28502802 | 28502881 | 28499911 | 28499983 | 28503034 | 28503156 | 0.24100 | 0.00006 | 0.01134 | 1included | HepG2 | UCHL5 | |
MXE | CLN3 | ENSG00000188603.12 | chr16 | - | 28500610 | 28500707 | 28502802 | 28502881 | 28499911 | 28499983 | 28503034 | 28503156 | 0.22200 | 0.00002 | 0.00163 | 1included | K562 | XRN2 | |
MXE | CLN3 | ENSG00000261832.1 | chr16 | - | 28499911 | 28499983 | 28500610 | 28500707 | 28498982 | 28499062 | 28503034 | 28503333 | 0.06500 | 0.00458 | 0.09780 | 1included | K562 | XRN2 | |
MXE | CLN3 | ENSG00000261832.1 | chr16 | - | 28499911 | 28499983 | 28502802 | 28502881 | 28498982 | 28499062 | 28503034 | 28503333 | 0.19800 | 0.00018 | 0.00953 | 1included | K562 | XRN2 | |
MXE | CLN3 | ENSG00000188603.12 | chr16 | - | 28500610 | 28500707 | 28502802 | 28502881 | 28499911 | 28499983 | 28503034 | 28503156 | -0.13900 | 0.00178 | 0.05942 | 2included | HepG2 | TAF15 | |
MXE | CLN3 | ENSG00000261832.1 | chr16 | - | 28499911 | 28499983 | 28502802 | 28502881 | 28498982 | 28499062 | 28503034 | 28503333 | -0.15300 | 0.00003 | 0.00217 | 2included | HepG2 | TAF15 | |
MXE | CLN3 | ENSG00000188603.12 | chr16 | - | 28498776 | 28498862 | 28500610 | 28500707 | 28495326 | 28495439 | 28502802 | 28502881 | -0.12100 | 0.01578 | 0.09121 | 2included | K562 | AQR | |
MXE | CLN3 | ENSG00000188603.12 | chr16 | - | 28500610 | 28500707 | 28502802 | 28502881 | 28499911 | 28499983 | 28503034 | 28503156 | 0.10600 | 0.00173 | 0.09565 | 1included | HepG2 | NOLC1 | |
MXE | CLN3 | ENSG00000188603.12 | chr16 | - | 28498982 | 28499062 | 28499911 | 28500121 | 28498776 | 28498862 | 28500610 | 28500707 | 0.11600 | 0.00262 | 0.06496 | 1included | K562 | EFTUD2 | |
MXE | CLN3 | ENSG00000261832.1 | chr16 | - | 28499911 | 28499983 | 28502802 | 28502881 | 28498982 | 28499062 | 28503034 | 28503333 | 0.12800 | 0.00265 | 0.06556 | 1included | K562 | EFTUD2 | |
MXE | CLN3 | ENSG00000188603.12 | chr16 | - | 28500610 | 28500707 | 28502802 | 28502881 | 28499911 | 28499983 | 28503034 | 28503156 | 0.15100 | 0.00002 | 0.00356 | 1included | HepG2 | NOL12 | |
MXE | CLN3 | ENSG00000188603.12 | chr16 | - | 28500610 | 28500707 | 28502802 | 28502881 | 28498982 | 28499062 | 28503034 | 28503080 | 0.11000 | 0.00374 | 0.07627 | 1included | HepG2 | XRN2 | |
MXE | CLN3 | ENSG00000261832.1 | chr16 | - | 28499911 | 28499983 | 28502802 | 28502881 | 28498982 | 28499062 | 28503034 | 28503333 | 0.16600 | 0.00015 | 0.00824 | 1included | HepG2 | XRN2 | |
MXE | CLN3 | ENSG00000188603.12 | chr16 | - | 28500610 | 28500707 | 28502802 | 28502881 | 28498776 | 28498862 | 28503034 | 28503156 | 0.08800 | 0.00628 | 0.09545 | 1included | HepG2 | DDX55 | |
MXE | CLN3 | ENSG00000188603.12 | chr16 | - | 28500610 | 28500707 | 28502802 | 28502881 | 28498982 | 28499062 | 28503034 | 28503080 | 0.11600 | 0.00177 | 0.03931 | 1included | HepG2 | DDX55 | |
MXE | CLN3 | ENSG00000188603.12 | chr16 | - | 28500610 | 28500707 | 28502802 | 28502881 | 28499911 | 28499983 | 28503034 | 28503156 | -0.09900 | 0.00188 | 0.08859 | 2included | HepG2 | TBRG4 | |
MXE | CLN3 | ENSG00000188603.12 | chr16 | - | 28500610 | 28500707 | 28502802 | 28502881 | 28495326 | 28495439 | 28503034 | 28503156 | -0.17400 | 0.00244 | 0.07957 | 2included | K562 | SAFB | |
MXE | CLN3 | ENSG00000188603.12 | chr16 | - | 28500610 | 28500707 | 28502802 | 28502881 | 28498776 | 28498862 | 28503034 | 28503156 | -0.17500 | 0.00163 | 0.06234 | 2included | K562 | SAFB | |
MXE | CLN3 | ENSG00000188603.12 | chr16 | - | 28500610 | 28500707 | 28502802 | 28502881 | 28498982 | 28499062 | 28503034 | 28503080 | -0.17400 | 0.00246 | 0.07957 | 2included | K562 | SAFB | |
MXE | CLN3 | ENSG00000188603.12 | chr16 | - | 28500610 | 28500707 | 28502802 | 28502881 | 28499911 | 28499983 | 28503034 | 28503156 | 0.14600 | 0.00010 | 0.00613 | 1included | HepG2 | HNRNPC | |
MXE | CLN3 | ENSG00000188603.12 | chr16 | - | 28500610 | 28500707 | 28502802 | 28502881 | 28499911 | 28499983 | 28503034 | 28503156 | 0.14400 | 0.00022 | 0.02594 | 1included | K562 | CPSF6 | |
MXE | CLN3 | ENSG00000261832.1 | chr16 | - | 28499911 | 28499983 | 28502802 | 28502881 | 28498982 | 28499062 | 28503034 | 28503333 | 0.11100 | 0.00060 | 0.05022 | 1included | K562 | CPSF6 | |
MXE | CLN3 | ENSG00000188603.12 | chr16 | - | 28500610 | 28500707 | 28502802 | 28502881 | 28499911 | 28499983 | 28503034 | 28503156 | 0.18900 | 0.00000 | 0.00003 | 1included | HepG2 | HNRNPU | |
MXE | CLN3 | ENSG00000188603.12 | chr16 | - | 28500610 | 28500707 | 28502802 | 28502881 | 28498982 | 28499062 | 28503034 | 28503080 | 0.12600 | 0.00136 | 0.04642 | 1included | HepG2 | SUPV3L1 | |
MXE | CLN3 | ENSG00000188603.12 | chr16 | - | 28500610 | 28500707 | 28502802 | 28502881 | 28499911 | 28499983 | 28503034 | 28503156 | 0.14300 | 0.00017 | 0.00984 | 1included | HepG2 | HNRNPL | |
MXE | CLN3 | ENSG00000188603.12 | chr16 | - | 28498982 | 28499062 | 28499911 | 28499983 | 28498776 | 28498862 | 28502802 | 28502881 | 0.05700 | 0.00181 | 0.05748 | 1included | HepG2 | NCBP2 | |
MXE | CLN3 | ENSG00000188603.12 | chr16 | - | 28500610 | 28500707 | 28502802 | 28502881 | 28499911 | 28499983 | 28503034 | 28503156 | 0.26200 | 0.00000 | 0.00000 | 1included | HepG2 | TIAL1 | |
MXE | CLN3 | ENSG00000188603.12 | chr16 | - | 28500610 | 28500707 | 28502802 | 28502881 | 28499911 | 28499983 | 28503034 | 28503156 | 0.18800 | 0.00025 | 0.00788 | 1included | K562 | PRPF8 | |
MXE | CLN3 | ENSG00000188603.12 | chr16 | - | 28499911 | 28499983 | 28500610 | 28500707 | 28498982 | 28499062 | 28502802 | 28502881 | 0.14800 | 0.00224 | 0.04239 | 1included | K562 | PRPF8 | |
MXE | CLN3 | ENSG00000188603.12 | chr16 | - | 28498982 | 28499062 | 28500610 | 28500707 | 28498776 | 28498862 | 28502802 | 28502881 | 0.18600 | 0.00197 | 0.03838 | 1included | K562 | PRPF8 | |
MXE | CLN3 | ENSG00000261832.1 | chr16 | - | 28499911 | 28499983 | 28500610 | 28500707 | 28498982 | 28499062 | 28503034 | 28503333 | 0.07000 | 0.00296 | 0.05182 | 1included | K562 | PRPF8 | |
MXE | CLN3 | ENSG00000261832.1 | chr16 | - | 28499911 | 28499983 | 28502802 | 28502881 | 28498982 | 28499062 | 28503034 | 28503333 | 0.22200 | 0.00001 | 0.00035 | 1included | K562 | PRPF8 | |
MXE | CLN3 | ENSG00000188603.12 | chr16 | - | 28500610 | 28500707 | 28502802 | 28502881 | 28498982 | 28499062 | 28503034 | 28503080 | 0.15800 | 0.00112 | 0.08657 | 1included | HepG2 | PRPF8 | |
MXE | CLN3 | ENSG00000188603.12 | chr16 | - | 28500610 | 28500707 | 28502802 | 28502881 | 28499911 | 28499983 | 28503034 | 28503080 | 0.25200 | 0.00000 | 0.00028 | 1included | K562 | SUPV3L1 | |
MXE | CLN3 | ENSG00000261832.1 | chr16 | - | 28499911 | 28499983 | 28502802 | 28502881 | 28498982 | 28499062 | 28503034 | 28503333 | 0.23700 | 0.00000 | 0.00013 | 1included | K562 | SUPV3L1 | |
MXE | CLN3 | ENSG00000261832.1 | chr16 | - | 28499911 | 28499983 | 28500610 | 28500707 | 28498982 | 28499062 | 28503034 | 28503333 | 0.08800 | 0.00036 | 0.01158 | 1included | K562 | SUPV3L1 | |
*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".
The Knockdown/knockout RNA-Seq assay for CLN3 is not avaliable on ENCORE database.