CD7

General Information

Gene Name       : CD7
Gene ID             : ENSG00000173762.7
Essential Gene : No

Functions

Localization

Domains (AlphaFold: CD7)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878CD7ENSG00000173762.70.000.010.01ENCSR000AEF
HepG2CD7ENSG00000173762.759.7110.0534.88ENCSR985KAT
K562CD7ENSG00000173762.70.030.000.01ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for CD7 is not avaliable on ENCORE database.



Proteins bound to RNA
  • CD7 RNA is bound by 13 proteins.  







eCLIP assay for CD7 is not avaliable on ENCORE database.





13 proteins are bound to CD7 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr178027407880274126-3'-UTR,CDS,intron-Distal,intron-Proximal3.5998410.29465HepG2SND1
chr178027280080272881-3'-UTR,intron-Distal3.683845.14978HepG2AKAP1
chr178027322380273283-3'-UTR,CDS,intron-Distal3.178986.34924HepG2SND1
chr178027363880273700-3'-UTR,intron-Distal3.452144.27354HepG2UPF1
chr178027407480274129-3'-UTR,CDS,intron-Distal,intron-Proximal3.123727.42570HepG2PCBP2
chr178027302180273150-3'-UTR,intron-Distal4.8403714.58493HepG2UPF1
chr178027407480274150-3'-UTR,CDS,intron-Distal,intron-Proximal3.4862120.34988HepG2RPS3
chr178027408480274152-3'-UTR,CDS,intron-Distal,intron-Proximal4.489807.39763HepG2PCBP1
chr178027285280272941-3'-UTR,intron-Distal4.1274513.79659HepG2LARP4
chr178027285880272919-3'-UTR,intron-Distal4.183128.88184HepG2LIN28B
chr178027320080273277-3'-UTR,CDS,intron-Distal3.598688.05310HepG2LARP4
chr178027375080273822-3'-UTR,intron-Distal,intron-Proximal4.585606.11802HepG2AKAP1
chr178027467680274731-3'-UTR,5'-UTR,CDS,intron-Distal3.5604714.03344HepG2SND1
chr178027365380273710-3'-UTR,intron-Distal3.352774.01829HepG2AKAP1
chr178027362680273674-3'-UTR,intron-Distal3.474973.85040HepG2IGF2BP1
chr178027303280273082-3'-UTR,intron-Distal6.8149724.55056HepG2LARP4
chr178027458480274676-3'-UTR,5'-UTR,CDS,intron-Distal3.6846515.83395HepG2SND1
chr178027304580273146-3'-UTR,intron-Distal3.5859915.28260HepG2DDX55
chr178027417280274272-3'-UTR,CDS,intron-Distal,intron-Proximal3.1819015.14340HepG2SND1
chr178027297480273040-3'-UTR,intron-Distal3.489553.92922HepG2AKAP1
chr178027308280273200-3'-UTR,intron-Distal6.0896444.24662HepG2LARP4
chr178027301880273150-3'-UTR,intron-Distal4.0964116.44944HepG2DDX59
chr178027407280274161-3'-UTR,CDS,intron-Distal,intron-Proximal3.3332012.47984HepG2DDX55
chr178027346580273566-3'-UTR,intron-Distal5.103749.16654HepG2UPF1
chr178027305880273190-3'-UTR,intron-Distal5.0557663.54980HepG2PCBP2
chr178027418280274201-3'-UTR,CDS,intron-Distal,intron-Proximal3.057104.65018HepG2PCBP2
chr178027454280274582-3'-UTR,CDS,intron-Distal,intron-Proximal4.9549314.38031HepG2SND1
chr178027348280273572-3'-UTR,intron-Distal3.824484.66086HepG2AKAP1
chr178027361880273677-3'-UTR,intron-Distal3.414573.98726HepG2RBFOX2
chr178027476180274826-3'-UTR,5'-UTR,CDS,intron-Distal,intron-Proximal3.9386910.93629HepG2RPS3
chr178027374480273808-3'-UTR,intron-Distal,intron-Proximal4.668626.20043HepG2UPF1
chr178027304080273169-3'-UTR,intron-Distal3.274126.10277HepG2AKAP1
chr178027294180273024-3'-UTR,intron-Distal3.8719713.25408HepG2LARP4
chr178027407580274185-3'-UTR,CDS,intron-Distal,intron-Proximal3.8137317.91371HepG2LARP4
chr178027536780275468-5'-UTR,CDS,intron-Distal,intron-Proximal5.3216771.34755HepG2DDX3X
chr178027529280275406-5'-UTR,CDS,intron-Distal4.2574923.07860HepG2RPS3
chr178027528980275335-5'-UTR,CDS,intron-Distal4.6525349.47910HepG2DDX3X
chr178027483580274858-5'-UTR,CDS,intron-Distal,intron-Proximal4.2936010.43313HepG2DDX3X
chr178027476480274823-5'-UTR,CDS,intron-Distal,intron-Proximal3.4817215.86410HepG2DDX3X
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for CD7 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for CD7 is not available on ENCORE database.

  • 77 RBPs can affect the levels of CD7.  








The Knockdown/knockout RNA-Seq assay for CD7 is not available on ENCORE database.





77 RBPs can affect the gene expression of CD7 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
CD7ENSG00000173762.32587.572001684.292400.619404.520803.33780HepG2ABCF1
CD7ENSG00000173762.32286.737301045.931501.1284017.8626015.50270HepG2AKAP8
CD7ENSG00000173762.31554.703901318.623200.237502.366501.65120HepG2AKAP8L
CD7ENSG00000173762.3395.75150854.34910-1.110207.007405.85150HepG2CALR
CD7ENSG00000173762.32052.225401386.200100.566003.416002.19100HepG2CPSF7
CD7ENSG00000173762.3491.25510288.581800.767404.359803.08350HepG2YBX3
CD7ENSG00000173762.3920.78820474.734100.9556018.3924017.03380HepG2CELF1
CD7ENSG00000173762.31592.371201213.871600.391506.801905.58400HepG2DDX19B
CD7ENSG00000173762.31225.423601664.73140-0.442004.414702.79850HepG2DDX47
CD7ENSG00000173762.33863.71170872.660502.146407.900106.90830HepG2DDX6
CD7ENSG00000173762.31606.366701255.730000.355204.720403.87830HepG2DKC1
CD7ENSG00000173762.31257.41480283.356102.149708.487807.30970HepG2DNAJC21
CD7ENSG00000173762.3481.20170280.868000.776602.434701.81650HepG2DNAJC2
CD7ENSG00000173762.31283.67780676.888600.923202.998902.04170HepG2EEF2
CD7ENSG00000173762.33093.08740837.998301.883907.730606.77640HepG2EIF2S1
CD7ENSG00000173762.3552.20310847.82730-0.618603.353301.41660HepG2EIF3H
CD7ENSG00000173762.3632.14690482.418400.389902.323601.57400HepG2EIF4G2
CD7ENSG00000173762.3921.652201282.49540-0.476704.616403.54290HepG2EWSR1
CD7ENSG00000173762.3870.17620491.307200.824602.965801.74880HepG2FAM120A
CD7ENSG00000173762.31123.948201700.55450-0.597402.082601.41040HepG2FIP1L1
CD7ENSG00000173762.3470.450601208.01780-1.360507.714206.44000HepG2FUBP3
CD7ENSG00000173762.3984.10300489.017801.008802.189701.39930HepG2GEMIN5
CD7ENSG00000173762.31900.589101078.209100.8177010.096808.92780HepG2GPKOW
CD7ENSG00000173762.3689.29370337.788101.028902.654301.31970HepG2HNRNPA0
CD7ENSG00000173762.3770.13050286.070901.428603.573702.85200HepG2HNRNPA1
CD7ENSG00000173762.31434.70400756.542200.9232019.2988017.63340HepG2HNRNPF
CD7ENSG00000173762.31186.83160465.011701.3517031.1626029.20680HepG2HNRNPL
CD7ENSG00000173762.31474.368301028.956900.518804.797703.99200HepG2HNRNPLL
CD7ENSG00000173762.3707.77820316.101501.1628014.1425012.86170HepG2HNRNPU
CD7ENSG00000173762.31631.38850744.977601.1307028.1150026.10020HepG2IGF2BP1
CD7ENSG00000173762.3510.93550322.886400.662008.162406.97070HepG2ILF2
CD7ENSG00000173762.3905.71440380.511301.251003.962602.48750HepG2KHDRBS1
CD7ENSG00000173762.31776.170201199.766500.5659014.2268012.15590HepG2KIF1C
CD7ENSG00000173762.32901.453201520.146700.932503.380602.46310HepG2LARP4
CD7ENSG00000173762.31861.46450962.604300.951303.225102.54340HepG2NCBP2
CD7ENSG00000173762.3871.34190506.186600.783502.859602.08360HepG2NOL12
CD7ENSG00000173762.31095.01090380.969101.523109.386506.74810HepG2NOLC1
CD7ENSG00000173762.31512.13810400.964101.9149012.153409.76080HepG2NONO
CD7ENSG00000173762.31488.48660912.384200.706008.920907.63590HepG2NSUN2
CD7ENSG00000173762.31123.88480364.337801.625009.715608.01100HepG2PABPC1
CD7ENSG00000173762.3717.13960936.69160-0.385304.043203.33710HepG2PCBP1
CD7ENSG00000173762.31065.31800281.936501.9177020.5133018.64450HepG2PPIL4
CD7ENSG00000173762.32499.55860483.193602.37090101.5388098.56920HepG2PUF60
CD7ENSG00000173762.3874.92750512.924400.7703015.0236013.86920HepG2PUM1
CD7ENSG00000173762.31842.70290512.554001.845908.049606.93130HepG2PUM2
CD7ENSG00000173762.31308.330501648.63830-0.333502.632301.79390HepG2RBM15
CD7ENSG00000173762.3797.39290394.107201.016604.158402.92430HepG2RBM27
CD7ENSG00000173762.31921.556101060.743600.8571023.7157022.44240HepG2NELFE
CD7ENSG00000173762.3702.20970363.398000.950302.734801.93850HepG2RPS2
CD7ENSG00000173762.3749.54100400.899200.902702.019201.33610HepG2RPS3A
CD7ENSG00000173762.3602.12790281.499601.0968012.2520011.04190HepG2SAFB2
CD7ENSG00000173762.33560.440501391.015301.355809.517208.21060HepG2SF3A3
CD7ENSG00000173762.31108.90080463.293201.2590012.4023011.09900HepG2SLBP
CD7ENSG00000173762.3830.60710328.271501.3392036.0135034.14800HepG2SMN1
CD7ENSG00000173762.31106.38650464.574301.251802.983001.60790HepG2SNRNP200
CD7ENSG00000173762.3606.715601133.20970-0.901307.187105.92100HepG2SNRNP70
CD7ENSG00000173762.3634.512401297.41780-1.0319029.0635027.88640HepG2SRFBP1
CD7ENSG00000173762.3358.960301035.76420-1.5288043.2712041.89320HepG2SRSF1
CD7ENSG00000173762.31332.93740477.075001.4822052.3055050.07210HepG2SRSF5
CD7ENSG00000173762.31125.23810743.279300.598205.574404.64320HepG2SRSF7
CD7ENSG00000173762.31055.91160842.680700.325303.713303.09500HepG2SRSF9
CD7ENSG00000173762.3690.93010349.071900.984902.483501.45020HepG2STIP1
CD7ENSG00000173762.3790.65510542.572800.543107.039406.12640HepG2SUCLG1
CD7ENSG00000173762.31676.596401147.629000.546804.820003.59500HepG2SUPT6H
CD7ENSG00000173762.3341.18590931.08610-1.4484019.5842018.28520HepG2TAF15
CD7ENSG00000173762.31523.701401002.976800.603205.329504.36990HepG2TARDBP
CD7ENSG00000173762.3984.39930307.134201.6803016.6077015.56900HepG2TIAL1
CD7ENSG00000173762.31045.92850309.898501.7548060.8431058.66920HepG2TRIM56
CD7ENSG00000173762.31902.64310472.048402.010904.173703.07370HepG2TUFM
CD7ENSG00000173762.31503.57550538.863301.480303.344502.25720HepG2U2AF2
CD7ENSG00000173762.31039.47650499.648401.056804.517003.42900HepG2UBE2L3
CD7ENSG00000173762.3599.11180256.227901.225303.440802.59900HepG2UCHL5
CD7ENSG00000173762.32743.471701233.623101.1530056.0549053.81560HepG2UPF1
CD7ENSG00000173762.3966.010501267.95320-0.392404.046202.80640HepG2UTP18
CD7ENSG00000173762.31167.79910427.170401.450806.410905.32220HepG2XRN2
CD7ENSG00000173762.3472.08190794.25810-0.7506012.6572011.39170HepG2ZC3H8
CD7ENSG00000173762.32049.814701356.742000.5952013.1388012.17010HepG2ZNF622
CD7ENSG00000173762.322.794104.213002.435603.178101.75070K562DDX6
CD7ENSG00000173762.324.329905.714202.090002.863602.26170K562RBM15
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for CD7 is not available on ENCORE database.






No RBPs affect the alternative splcing events of CD7 on ENCORE database.





The Knockdown/knockout RNA-Seq assay for CD7 is not avaliable on ENCORE database.