C19orf43

General Information

Gene Name       : C19orf43
Gene ID             :
Essential Gene : No

Functions

Localization

Domains (AlphaFold: C19orf43)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for C19orf43 is not avaliable on ENCORE database.



Proteins bound to RNA
  • C19orf43 RNA is bound by 24 proteins.  







eCLIP assay for C19orf43 is not avaliable on ENCORE database.





24 proteins are bound to C19orf43 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr191284147812841561-3'-UTR,intron-Distal3.7972617.77687HepG2LARP4
chr191284157312841618-3'-UTR,intron-Distal3.398349.96417K562DDX55
chr191284155712841614-3'-UTR,intron-Distal3.117856.26015K562RBM15
chr191284182912841873-3'-UTR,CDS,intron-Distal4.102893.11282HepG2G3BP1
chr191284148412841595-3'-UTR,intron-Distal4.1393016.19546K562PCBP1
chr191284156012841613-3'-UTR,intron-Distal4.700779.28335HepG2DDX55
chr191284168212841728-3'-UTR,intron-Distal3.1452910.67855K562DDX55
chr191284187012841932-3'-UTR,CDS,intron-Distal3.5919012.88210K562SF3B4
chr191284215812842185-3'-UTR,CDS,intron-Distal3.080646.19256K562DDX55
chr191284183712841881-3'-UTR,CDS,intron-Distal3.627209.27257K562DDX55
chr191284183212841873-3'-UTR,CDS,intron-Distal3.527153.67652K562APOBEC3C
chr191284174812841768-3'-UTR,intron-Distal3.979006.99054K562DDX55
chr191284215512842216-3'-UTR,CDS,intron-Distal,intron-Proximal3.384184.31813HepG2G3BP1
chr191284158412841619-3'-UTR,intron-Distal3.384747.56719HepG2LARP4
chr191284146712841512-3'-UTR,intron-Distal5.4402176.17979HepG2PCBP2
chr191284182412841882-3'-UTR,CDS,intron-Distal3.512875.56491HepG2BCLAF1
chr191284173112841786-3'-UTR,CDS,intron-Distal3.154717.54974HepG2LARP4
chr191284168112841726-3'-UTR,intron-Distal3.798039.65265HepG2LARP4
chr191284172312841775-3'-UTR,intron-Distal7.12057400.00000K562PUM2
chr191284167112841720-3'-UTR,intron-Distal3.272414.14939K562PUM1
chr191284184012841863-3'-UTR,CDS,intron-Distal4.062333.81597K562RBM15
chr191284168012841719-3'-UTR,intron-Distal4.060117.70265K562RBM15
chr191284168812841716-3'-UTR,intron-Distal5.118468.19301K562PABPC4
chr191284156812841618-3'-UTR,intron-Distal5.47901400.00000K562PABPC4
chr191284167612841723-3'-UTR,intron-Distal7.28348400.00000K562PUM2
chr191284151212841587-3'-UTR,intron-Distal4.7663981.07142HepG2PCBP2
chr191284535612845402-CDS,intron-Distal3.362366.38147K562DDX55
chr191284535012845390-CDS,intron-Distal3.9929410.82192HepG2GRSF1
chr191284528212845457-CDS,intron-Distal4.0381421.36471HepG2RPS3
chr191284517312845241-CDS,intron-Distal3.5724310.27034HepG2RPS3
chr191284528312845350-CDS,intron-Distal3.290297.76665HepG2GRSF1
chr191284532612845410-CDS,intron-Distal3.106275.18500K562GEMIN5
chr191284534812845449-CDS,intron-Distal3.4749911.67323HepG2DDX55
chr191284525312845311-CDS,intron-Distal4.5133011.55613K562PABPC4
chr191284526912845296-CDS,intron-Distal3.389783.96118HepG2LARP4
chr191284514312845282-CDS,intron-Distal3.154756.28114HepG2SRSF1
chr191284531012845382-CDS,intron-Distal3.557255.47723K562DDX51
chr191284533812845396-CDS,intron-Distal4.847249.16812HepG2LARP4
chr191284531612845397-CDS,intron-Distal4.7101414.30089K562DDX6
chr191284540512845463-CDS,intron-Distal3.4931217.03121HepG2DDX3X
chr191284540812845470-CDS,intron-Distal5.2645425.75983HepG2GRSF1
chr191284539012845408-CDS,intron-Distal4.8845120.01150HepG2GRSF1
chr191284537012845468-CDS,intron-Distal3.944755.44376K562NCBP2
chr191284530912845431-CDS,intron-Distal3.163745.84094HepG2PRPF4
chr191284532312845392-CDS,intron-Distal3.200326.06579K562DROSHA
chr191284523112845305-CDS,intron-Distal4.5351710.89936HepG2DDX55
chr191284193212841956-intron-Distal3.387914.64775K562SF3B4
chr191284504012845108-intron-Distal3.017653.98555K562GTF2F1
chr191284488912844944-intron-Distal3.024043.04614K562FUS
chr191284505212845125-intron-Distal3.563973.51554HepG2PRPF4
chr191284486612844961-intron-Distal5.013615.84281K562GTF2F1
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for C19orf43 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for C19orf43 is not available on ENCORE database.

  • 81 RBPs can affect the levels of C19orf43.  








The Knockdown/knockout RNA-Seq assay for C19orf43 is not available on ENCORE database.





81 RBPs can affect the gene expression of C19orf43 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
C19orf43ENSG00000123144.6913.051001614.53280-0.822304.925404.15660HepG2BOP1
C19orf43ENSG00000123144.6874.057001300.20370-0.572905.248904.22790HepG2CALR
C19orf43ENSG00000123144.6724.430401003.15720-0.469603.513602.64870HepG2CIRBP
C19orf43ENSG00000123144.61051.828801342.64460-0.352205.131404.27670HepG2CKAP4
C19orf43ENSG00000123144.62085.866701697.012700.297502.404501.37670HepG2CPSF7
C19orf43ENSG00000123144.6505.13550834.47040-0.724205.289703.21370HepG2CSTF2T
C19orf43ENSG00000123144.6548.65660898.32200-0.711308.027706.93400HepG2DDX21
C19orf43ENSG00000123144.6492.68900856.96620-0.798607.599506.39470HepG2DDX55
C19orf43ENSG00000123144.61200.89330843.422400.509704.190303.07920HepG2EEF2
C19orf43ENSG00000123144.6518.15860827.64290-0.675605.029403.53090HepG2AGO1
C19orf43ENSG00000123144.61951.266601563.256600.319802.893801.69740HepG2EIF2S2
C19orf43ENSG00000123144.6337.44720684.62970-1.0207011.058109.38340HepG2EIF3D
C19orf43ENSG00000123144.6543.544401086.21400-0.998809.376308.14860HepG2EIF4B
C19orf43ENSG00000123144.61519.988101774.43710-0.223302.255501.70350HepG2ETF1
C19orf43ENSG00000123144.6590.52140856.33020-0.536205.008003.53750HepG2FASTKD2
C19orf43ENSG00000123144.6518.20880713.24940-0.460903.294501.91170HepG2FKBP4
C19orf43ENSG00000123144.6838.842701319.56420-0.653608.340107.01330HepG2FUBP3
C19orf43ENSG00000123144.61422.896101125.715000.337902.283301.65250HepG2FXR1
C19orf43ENSG00000123144.6817.765601044.11420-0.352502.102401.51910HepG2G3BP1
C19orf43ENSG00000123144.61038.992701280.97880-0.302102.991802.02460HepG2HNRNPA2B1
C19orf43ENSG00000123144.6906.766901269.61990-0.485608.530107.40720HepG2HNRNPL
C19orf43ENSG00000123144.61118.11660920.544700.280402.079901.43380HepG2ILF2
C19orf43ENSG00000123144.61556.681501132.365100.459003.336102.64900HepG2MATR3
C19orf43ENSG00000123144.61041.674301414.15330-0.441004.495002.94880HepG2NAA15
C19orf43ENSG00000123144.6652.145101159.00060-0.829609.139708.02810HepG2NCBP2
C19orf43ENSG00000123144.61124.703401382.09200-0.297302.678201.92740HepG2NOL12
C19orf43ENSG00000123144.6762.502001031.99070-0.436603.027202.27410HepG2PABPC4
C19orf43ENSG00000123144.6981.05500803.797500.287402.438901.74240HepG2PPIL4
C19orf43ENSG00000123144.6438.53590660.87290-0.591704.576603.56650HepG2PRPF8
C19orf43ENSG00000123144.6599.347401162.47520-0.9557021.3460020.10210HepG2PTBP1
C19orf43ENSG00000123144.6723.257101367.84520-0.9193026.1497024.61260HepG2PUS1
C19orf43ENSG00000123144.6694.238201259.11510-0.8589016.3694015.03240HepG2QKI
C19orf43ENSG00000123144.61607.157502229.08630-0.471902.834601.96790HepG2RBM15
C19orf43ENSG00000123144.61171.578501483.08790-0.340203.948003.35780HepG2RBM22
C19orf43ENSG00000123144.6845.464301142.68040-0.434603.823703.04020HepG2RBM25
C19orf43ENSG00000123144.6336.75490635.87260-0.917008.306806.48160HepG2RCC2
C19orf43ENSG00000123144.6482.77400653.71970-0.437302.584401.82230HepG2RRP9
C19orf43ENSG00000123144.6799.55710548.426800.543803.433201.98390HepG2SART3
C19orf43ENSG00000123144.63302.602302014.551100.713002.709702.04280HepG2SF3A3
C19orf43ENSG00000123144.61395.327401675.07010-0.263603.229102.70110HepG2SRFBP1
C19orf43ENSG00000123144.61012.066701263.34460-0.319902.348301.90330HepG2SRSF1
C19orf43ENSG00000123144.6587.712101027.76090-0.8063016.4964015.35200HepG2SRSF9
C19orf43ENSG00000123144.6587.01390853.03660-0.539204.079203.28150HepG2SUPV3L1
C19orf43ENSG00000123144.6618.539701135.42360-0.8763015.7323014.55740HepG2TAF15
C19orf43ENSG00000123144.6645.023401043.42670-0.693908.337106.89000HepG2TIA1
C19orf43ENSG00000123144.61234.507401786.60760-0.533304.018603.20080HepG2UPF1
C19orf43ENSG00000123144.61469.277401836.31720-0.321702.382201.39960HepG2UTP18
C19orf43ENSG00000123144.62181.392101724.886000.338602.019001.49100HepG2UTP3
C19orf43ENSG00000123144.61100.41740839.722800.390002.207401.55360HepG2XRN2
C19orf43ENSG00000123144.62374.156201656.373200.5193010.709209.68650K562AGGF1
C19orf43ENSG00000123144.62496.155101820.236400.455502.792001.80290K562AKAP8
C19orf43ENSG00000123144.62427.589201723.564000.494005.332904.40930K562AKAP8L
C19orf43ENSG00000123144.62232.653701801.374000.309602.595401.39490K562APOBEC3C
C19orf43ENSG00000123144.62596.112001628.018700.673103.535702.88840K562AQR
C19orf43ENSG00000123144.62600.629301808.495200.524003.703702.63320K562ATP5C1
C19orf43ENSG00000123144.61193.55760819.152200.543005.441803.84750K562CCAR1
C19orf43ENSG00000123144.62584.472801979.350900.384704.499602.95510K562CCDC124
C19orf43ENSG00000123144.62379.620901845.418700.366703.202402.00540K562CPEB4
C19orf43ENSG00000123144.62066.471202510.48600-0.280803.087702.05850K562CELF1
C19orf43ENSG00000123144.62692.130601909.481200.4955010.765809.57720K562DDX47
C19orf43ENSG00000123144.61812.686801451.942700.320002.403301.72520K562EIF2S2
C19orf43ENSG00000123144.6470.06610800.67670-0.768406.652404.95720K562EIF3D
C19orf43ENSG00000123144.6761.16490538.392000.499505.246304.16660K562EIF3G
C19orf43ENSG00000123144.62426.486201662.857700.545106.656105.29690K562FIP1L1
C19orf43ENSG00000123144.61176.21820831.056400.501006.573705.69770K562FXR1
C19orf43ENSG00000123144.6349.38210504.24020-0.529301.984001.39790K562G3BP2
C19orf43ENSG00000123144.61553.784302055.70120-0.403805.588403.99310K562GLRX3
C19orf43ENSG00000123144.62566.444401934.702600.407604.594003.62110K562GRSF1
C19orf43ENSG00000123144.62303.271501367.621500.751909.118607.24520K562HNRNPM
C19orf43ENSG00000123144.61720.927401315.263500.387704.940603.73250K562HNRNPU
C19orf43ENSG00000123144.6927.54450673.094800.462504.320203.26580K562MAGOH
C19orf43ENSG00000123144.62218.134601750.912900.341102.761501.68770K562MAK16
C19orf43ENSG00000123144.6888.99050671.712100.404203.430402.38930K562MATR3
C19orf43ENSG00000123144.61323.259202176.03130-0.7176011.247409.10190K562MSI2
C19orf43ENSG00000123144.61648.179202161.32470-0.391003.354402.46760K562MTPAP
C19orf43ENSG00000123144.61928.638202401.29700-0.316206.489705.41090K562NSUN2
C19orf43ENSG00000123144.62957.459601887.524300.647808.906407.22220K562PPIG
C19orf43ENSG00000123144.6949.03200727.851700.382702.438401.73320K562PRPF8
C19orf43ENSG00000123144.62346.285001665.423900.494404.402203.67240K562RBM15
C19orf43ENSG00000123144.6456.25710977.22900-1.0988019.6234017.01720K562RCC2
C19orf43ENSG00000123144.6783.74990565.321100.471202.955701.91770K562RPS3
C19orf43ENSG00000123144.61661.515602369.65890-0.512203.502302.59200K562SF3A3
C19orf43ENSG00000123144.61852.487402427.78400-0.390204.423303.26970K562SRPK2
C19orf43ENSG00000123144.61157.41590641.113700.8522013.6985012.12620K562SRSF1
C19orf43ENSG00000123144.6923.67490545.673800.759209.070407.03160K562SRSF4
C19orf43ENSG00000123144.61517.334801995.75070-0.395402.651701.43340K562STAU1
C19orf43ENSG00000123144.61028.80440648.821500.665007.070905.88750K562TARDBP
C19orf43ENSG00000123144.6909.17030625.868800.538605.694804.45350K562TIA1
C19orf43ENSG00000123144.6511.07330745.74260-0.545104.388103.07660K562UCHL5
C19orf43ENSG00000123144.62242.210302546.15630-0.183401.904901.30110K562UPF1
C19orf43ENSG00000123144.61535.255002178.64890-0.505006.820505.40860K562WDR3
C19orf43ENSG00000123144.61587.970202265.65640-0.5127010.035108.54030K562WDR43
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for C19orf43 is not available on ENCORE database.






No RBPs affect the alternative splcing events of C19orf43 on ENCORE database.





The Knockdown/knockout RNA-Seq assay for C19orf43 is not avaliable on ENCORE database.