BRMS1L

General Information

Gene Name       : BRMS1L
Gene ID             : ENSG00000100916.13
Essential Gene : No

Functions

Localization

Domains (AlphaFold: BRMS1L)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878BRMS1LENSG00000100916.137.348.067.70ENCSR000AEF
HepG2BRMS1LENSG00000100916.1326.5741.0733.82ENCSR985KAT
K562BRMS1LENSG00000100916.132.532.232.38ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for BRMS1L is not avaliable on ENCORE database.



Proteins bound to RNA
  • BRMS1L RNA is bound by 12 proteins.  







eCLIP assay for BRMS1L is not avaliable on ENCORE database.





12 proteins are bound to BRMS1L RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr143633307536333108+3'-UTR,CDS,intron-Proximal3.554104.09885HepG2BCLAF1
chr143633307436333165+3'-UTR,CDS,intron-Proximal3.8403912.59726HepG2PPIG
chr143633720836337243+3'-UTR,CDS,intron-Proximal4.776505.68196HepG2BCLAF1
chr143633491836334976+3'-UTR,CDS,intron-Proximal3.250394.81700HepG2U2AF2
chr143633415836334205+3'-UTR,CDS3.113903.55800HepG2BCLAF1
chr143633718036337208+3'-UTR,CDS3.906383.02457HepG2BCLAF1
chr143634002936340105+3'-UTR,intron-Distal3.582493.53952HepG2KHSRP
chr143634003236340105+3'-UTR,intron-Distal4.479083.35973HepG2FUBP3
chr143633184136331895+3'-UTR,CDS,intron-Proximal3.930564.93978HepG2BCLAF1
chr143629579836295886+5'-UTR,CDS,intron-Proximal3.857203.41051HepG2SRSF1
chr143629575536295871+5'-UTR,CDS,intron-Proximal3.749818.10680HepG2GRWD1
chr143629560836295757+5'-UTR,CDS3.0578710.06502HepG2NCBP2
chr143630218336302281+5'-UTR,CDS,intron-Proximal3.665307.83567HepG2BCLAF1
chr143630061536300714+5'-UTR,CDS,intron-Proximal4.4136311.99763HepG2BCLAF1
chr143630061436300677+5'-UTR,CDS,intron-Proximal3.706654.41784HepG2GRWD1
chr143629560736295713+5'-UTR4.682257.01471HepG2GRWD1
chr143631442236314481+intron-Distal3.957213.63454HepG2SUGP2
chr143631053136310578+intron-Distal4.045983.39864HepG2SUGP2
chr143631207436312184+intron-Distal4.114043.54208HepG2SUGP2
chr143632379536323859+intron-Distal3.439703.39827HepG2MATR3
chr143634454836344626+intron-Distal3.376064.43994HepG2U2AF2
chr143632314336323233+intron-Distal3.942833.30440HepG2QKI
chr143631206436312146+intron-Distal3.425694.10380HepG2MATR3
chr143629597836296088+intron-Distal4.056836.49249HepG2EFTUD2
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for BRMS1L is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for BRMS1L is not available on ENCORE database.

  • 70 RBPs can affect the levels of BRMS1L.  








The Knockdown/knockout RNA-Seq assay for BRMS1L is not available on ENCORE database.





70 RBPs can affect the gene expression of BRMS1L :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
BRMS1LENSG00000100916.92454.883601078.757001.1862016.1451014.96930HepG2AKAP1
BRMS1LENSG00000100916.91001.055401366.53800-0.449004.142603.42670HepG2BOP1
BRMS1LENSG00000100916.91331.50610941.753700.499503.170302.34950HepG2CALR
BRMS1LENSG00000100916.91135.97130848.058600.421601.998001.33380HepG2CIRBP
BRMS1LENSG00000100916.9678.619501254.55990-0.8865012.5490011.20330HepG2CPSF6
BRMS1LENSG00000100916.91018.86400599.619800.764709.613607.80610HepG2CSTF2
BRMS1LENSG00000100916.9795.245701250.90560-0.6535015.0931013.60080HepG2DAZAP1
BRMS1LENSG00000100916.9629.97680806.65480-0.356702.473501.54540HepG2DHX30
BRMS1LENSG00000100916.9600.40560836.35490-0.478205.236604.29820HepG2DNAJC21
BRMS1LENSG00000100916.9584.09970828.93170-0.505007.144606.16560HepG2DNAJC2
BRMS1LENSG00000100916.9774.23430571.191700.438703.055402.11000HepG2EIF3D
BRMS1LENSG00000100916.91452.19180943.384500.622203.319002.62000HepG2EIF4A3
BRMS1LENSG00000100916.91944.592401469.607400.403906.476005.62000HepG2ETF1
BRMS1LENSG00000100916.91093.49420847.375400.367802.174001.43440HepG2EWSR1
BRMS1LENSG00000100916.9661.53270508.585300.379202.399601.57230HepG2GEMIN5
BRMS1LENSG00000100916.9818.795001015.47560-0.310602.732702.01920HepG2HNRNPF
BRMS1LENSG00000100916.9781.506201139.54160-0.544106.454705.46670HepG2HNRNPL
BRMS1LENSG00000100916.9866.725501357.18420-0.647006.851705.91190HepG2HNRNPLL
BRMS1LENSG00000100916.9703.11930932.98120-0.408104.827404.04470HepG2HNRNPU
BRMS1LENSG00000100916.9740.54830999.96320-0.433303.856003.01220HepG2IGF2BP1
BRMS1LENSG00000100916.9795.89020953.01150-0.259902.651601.93260HepG2ILF2
BRMS1LENSG00000100916.9652.46790792.68150-0.280802.596201.60620HepG2KIF1C
BRMS1LENSG00000100916.91915.31640957.046501.000805.075604.24460HepG2MATR3
BRMS1LENSG00000100916.9946.916501240.38450-0.389502.995402.20230HepG2NOL12
BRMS1LENSG00000100916.9513.83400872.77430-0.764302.452001.76860HepG2PABPC4
BRMS1LENSG00000100916.91347.41200860.605000.646704.447403.14890HepG2PCBP2
BRMS1LENSG00000100916.9648.28270832.14680-0.360202.029901.39000HepG2PPIL4
BRMS1LENSG00000100916.9838.24830592.005900.501706.174305.07010HepG2PRPF4
BRMS1LENSG00000100916.91683.32590904.719200.895707.848305.89500HepG2PRPF6
BRMS1LENSG00000100916.91009.81970736.315300.455603.583002.67630HepG2PRPF8
BRMS1LENSG00000100916.9639.67070852.53700-0.414404.657903.98880HepG2PTBP1
BRMS1LENSG00000100916.91026.809501256.80000-0.291603.753803.08590HepG2PUM1
BRMS1LENSG00000100916.9458.29560883.20330-0.9465016.4080015.13110HepG2PUS1
BRMS1LENSG00000100916.9881.219501088.92540-0.305302.481701.66540HepG2RBM15
BRMS1LENSG00000100916.92360.029901228.322000.9420027.7419026.44080HepG2RBM22
BRMS1LENSG00000100916.91134.34500838.004200.436702.534501.88640HepG2RBM25
BRMS1LENSG00000100916.91205.97920948.816300.345903.001202.44210HepG2NELFE
BRMS1LENSG00000100916.91070.37980883.649100.276502.410101.82960HepG2RECQL
BRMS1LENSG00000100916.9829.78700555.754600.578205.807804.95570HepG2RPS19
BRMS1LENSG00000100916.91156.42780888.970600.379402.943602.11960HepG2RPS2
BRMS1LENSG00000100916.9924.57160728.385500.344002.079101.38850HepG2RRP9
BRMS1LENSG00000100916.91404.64660903.500600.636504.159202.26280HepG2RTF1
BRMS1LENSG00000100916.9468.01760830.86840-0.8281015.3531014.01930HepG2SAFB2
BRMS1LENSG00000100916.9920.028501135.13300-0.303101.990901.37790HepG2SLBP
BRMS1LENSG00000100916.91648.206801387.348100.248503.095302.57550HepG2SRFBP1
BRMS1LENSG00000100916.91665.24860926.496900.8458022.1066021.04370HepG2SRSF1
BRMS1LENSG00000100916.91536.316701168.946100.394205.233104.41450HepG2SRSF5
BRMS1LENSG00000100916.9435.10040753.73600-0.7927013.3353012.28570HepG2SRSF9
BRMS1LENSG00000100916.91584.736501204.553100.395606.144005.43530HepG2SSB
BRMS1LENSG00000100916.91583.917601329.482300.252502.681902.06720HepG2SUCLG1
BRMS1LENSG00000100916.91095.19700832.711800.395204.131303.46750HepG2TAF15
BRMS1LENSG00000100916.91016.044901322.80830-0.380602.987702.23810HepG2TARDBP
BRMS1LENSG00000100916.91344.69580906.612700.568605.102404.46640HepG2TIAL1
BRMS1LENSG00000100916.9541.73860833.89240-0.622303.777902.07290HepG2TRA2A
BRMS1LENSG00000100916.9487.30350914.66650-0.9084018.6600017.36410HepG2TRIM56
BRMS1LENSG00000100916.91380.78360970.154100.509107.879306.21900HepG2UTP18
BRMS1LENSG00000100916.91143.04870911.244800.326903.466902.81000HepG2UTP3
BRMS1LENSG00000100916.9985.28370584.223100.7539015.0787013.71400HepG2ZC3H8
BRMS1LENSG00000100916.9766.944901038.04750-0.436706.554205.80620HepG2ZNF622
BRMS1LENSG00000100916.9150.1443077.604700.952004.323903.50180K562AKAP8L
BRMS1LENSG00000100916.9220.94930140.519900.652802.271901.32780K562CNOT7
BRMS1LENSG00000100916.9332.88810212.637000.646503.847402.68700K562CELF1
BRMS1LENSG00000100916.9244.25740145.347700.748804.707103.88830K562DDX47
BRMS1LENSG00000100916.9267.92750172.939700.631503.668802.58790K562EIF4G2
BRMS1LENSG00000100916.9147.2037074.423900.983903.960203.07680K562G3BP2
BRMS1LENSG00000100916.9142.9633082.355500.795602.916602.06760K562KIF1C
BRMS1LENSG00000100916.9307.70380184.337300.739104.499403.05520K562MSI2
BRMS1LENSG00000100916.9126.8298064.667300.971703.127202.18030K562NAA15
BRMS1LENSG00000100916.9153.3042078.577000.964103.944103.04990K562PRPF8
BRMS1LENSG00000100916.9275.64780188.690900.546702.469701.70080K562PUF60
BRMS1LENSG00000100916.9271.43070196.648800.464902.190001.33450K562PUM2
BRMS1LENSG00000100916.9121.0666076.957600.653601.842901.38140K562PUS1
BRMS1LENSG00000100916.9135.3032074.987700.851403.416402.76910K562RBM15
BRMS1LENSG00000100916.9128.3028080.074100.680001.996501.30830K562RPS19
BRMS1LENSG00000100916.9108.0999061.767500.807302.607901.81360K562SYNCRIP
BRMS1LENSG00000100916.9145.3242078.032000.897002.821001.51130K562UTP18
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for BRMS1L is not available on ENCORE database.





4 RBPs can affect the splicing of BRMS1L :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SEBRMS1LENSG00000100916.9chr14+363277823632792036302183363023113633179536331892-0.614000.000000.00001excludedHepG2U2AF1
SEBRMS1LENSG00000100916.9chr14+363040493630412936302183363023113633179536331892-0.246000.000000.00000excludedHepG2U2AF2
SEBRMS1LENSG00000100916.9chr14+3629900036299113362956463629586436300615363007060.080000.000340.06961includedHepG2FUS
A3SSBRMS1LENSG00000100916.9chr14+3633709036337238363371113633723836334927363349670.060000.000000.00001longerHepG2U2AF2
MXEBRMS1LENSG00000100916.9chr14+3630404936304129363277823632792036302183363023113633179536331892-0.058000.000420.026542includedHepG2SRSF9

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for BRMS1L is not avaliable on ENCORE database.