ANKRD27

General Information

Gene Name       : ANKRD27
Gene ID             : ENSG00000105186.15
Essential Gene : No

Functions

Localization

Domains (AlphaFold: ANKRD27)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878ANKRD27ENSG00000105186.1516.5119.1517.83ENCSR000AEF
HepG2ANKRD27ENSG00000105186.1517.3516.9917.17ENCSR985KAT
K562ANKRD27ENSG00000105186.1539.2640.5139.88ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for ANKRD27 is not avaliable on ENCORE database.



Proteins bound to RNA
  • ANKRD27 RNA is bound by 26 proteins.  







eCLIP assay for ANKRD27 is not avaliable on ENCORE database.





26 proteins are bound to ANKRD27 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr193313398933134052-3'-UTR,5'-UTR,CDS,intron-Distal,intron-Proximal5.052197.70650HepG2PRPF8
chr193313419733134230-3'-UTR,5'-UTR,CDS,intron-Distal,intron-Proximal5.275887.49801K562ZNF622
chr193308827133088347-3'-UTR,intron-Distal3.417006.25289K562IGF2BP1
chr193314059533140645-3'-UTR,CDS,intron-Distal3.144365.44868K562ZNF622
chr193313408333134105-3'-UTR,5'-UTR,CDS,intron-Distal,intron-Proximal3.748809.20662K562DDX24
chr193313399533134076-3'-UTR,5'-UTR,CDS,intron-Distal,intron-Proximal4.796645.70555K562PRPF8
chr193313736933137439-3'-UTR,CDS,intron-Distal,intron-Proximal5.2395122.65351K562PUM2
chr193313408433134105-3'-UTR,5'-UTR,CDS,intron-Distal,intron-Proximal3.805324.49887K562ZNF622
chr193308841733088481-3'-UTR,intron-Distal4.236274.61859K562IGF2BP1
chr193313433633134390-3'-UTR,CDS,intron-Distal,intron-Proximal4.171558.43090K562DDX24
chr193308793633088003-3'-UTR,intron-Distal5.078734.90933K562CPEB4
chr193308892233088967-3'-UTR,intron-Distal3.822813.43253K562YBX3
chr193308867933088723-3'-UTR,intron-Distal3.947413.20319K562UPF1
chr193313530333135345-3'-UTR,CDS,intron-Distal4.084683.16051HepG2PPIG
chr193313418833134259-3'-UTR,5'-UTR,CDS,intron-Distal,intron-Proximal3.4996313.19442K562DDX24
chr193313419333134236-3'-UTR,5'-UTR,CDS,intron-Distal,intron-Proximal4.277325.37961K562YBX3
chr193313418133134279-3'-UTR,5'-UTR,CDS,intron-Distal,intron-Proximal3.378187.59392K562EFTUD2
chr193313447833134532-3'-UTR,CDS,intron-Distal,intron-Proximal4.324807.99930K562DDX24
chr193313418833134236-3'-UTR,5'-UTR,CDS,intron-Distal,intron-Proximal4.636094.34038HepG2BCLAF1
chr193314983233149945-3'-UTR,5'-UTR,CDS,intron-Distal4.118724.04622HepG2GRWD1
chr193313423033134258-3'-UTR,CDS,intron-Distal,intron-Proximal4.851884.55944K562ZNF622
chr193313402633134083-3'-UTR,5'-UTR,CDS,intron-Distal,intron-Proximal4.2449915.25586K562DDX24
chr193313736433137369-3'-UTR,CDS,intron-Distal,intron-Proximal5.032793.15625K562PUM2
chr193313121233131287-5'-UTR,CDS,intron-Distal,intron-Proximal3.120246.46814K562ZNF622
chr193313398433134030-5'-UTR,CDS,intron-Distal,intron-Proximal5.210816.22530K562AQR
chr193316590933165982-5'-UTR,intron-Distal4.854224.02817HepG2PRPF8
chr193312226633122343-CDS,intron-Distal,intron-Proximal4.562425.05356HepG2PRPF8
chr193312223733122321-CDS,intron-Distal,intron-Proximal5.6122710.04245K562AQR
chr193313121933131275-CDS,intron-Distal4.785808.08662K562DDX24
chr193313026833130393-CDS,intron-Distal3.9167618.34974K562DDX24
chr193313302033133051-CDS,intron-Distal4.9218817.43234K562YBX3
chr193313288733132931-CDS,intron-Distal,intron-Proximal3.995623.12843K562PRPF8
chr193308908033089204-CDS,intron-Distal,intron-Proximal3.771948.05186K562FXR2
chr193311323133113340-CDS,intron-Distal,intron-Proximal4.265436.71940K562PRPF8
chr193313299433133051-CDS,intron-Distal3.827183.25521K562LIN28B
chr193311331733113448-CDS,intron-Distal,intron-Proximal3.223013.21309HepG2GRWD1
chr193313298233133052-CDS,intron-Distal,intron-Proximal3.135406.25786K562ZNF622
chr193312237133122460-CDS,intron-Distal,intron-Proximal3.715597.62845K562SF3B4
chr193311335933113409-CDS,intron-Distal3.849623.15006K562RBM15
chr193309673733096822-CDS,intron-Distal,intron-Proximal3.993169.12426K562FXR2
chr193313031333130395-CDS,intron-Distal,intron-Proximal3.4482012.48200K562ZNF622
chr193310662933106682-CDS,intron-Distal3.220584.89070K562UCHL5
chr193313299233133020-CDS,intron-Distal4.5718612.40060K562YBX3
chr193311894533118990-CDS,intron-Distal,intron-Proximal3.530823.88924K562PRPF8
chr193311335533113415-CDS,intron-Distal3.241593.51358K562FXR2
chr193311894433118994-CDS,intron-Distal,intron-Proximal3.831156.32052K562AQR
chr193311959933119683-CDS,intron-Distal,intron-Proximal3.299455.30777HepG2PPIG
chr193311904233119079-CDS,intron-Distal,intron-Proximal4.244577.95258K562DDX24
chr193311971133119755-CDS,intron-Distal3.539705.21950K562DDX24
chr193311973433119778-CDS,intron-Distal,intron-Proximal4.853345.17615K562AQR
chr193311347433113526-CDS,intron-Distal,intron-Proximal4.850145.26571K562FMR1
chr193310658133106694-CDS,intron-Distal,intron-Proximal4.550306.10084K562SRSF1
chr193311008633110168-CDS,intron-Distal,intron-Proximal4.818086.69228HepG2PRPF8
chr193311963133119685-CDS,intron-Distal4.154285.64813K562DDX24
chr193309082033090895-CDS,intron-Distal,intron-Proximal3.495623.88924K562PRPF8
chr193311671933116781-CDS,intron-Distal,intron-Proximal5.266336.22530K562AQR
chr193312225333122341-CDS,intron-Distal,intron-Proximal4.3432010.26009K562PRPF8
chr193308906733089203-CDS,intron-Distal,intron-Proximal5.4714810.56686K562FMR1
chr193311045133110520-CDS,intron-Distal,intron-Proximal3.696255.02403K562SF3B4
chr193313026033130321-CDS,intron-Distal,intron-Proximal3.764413.25521K562LIN28B
chr193313299733133051-CDS,intron-Distal3.712029.21245K562DDX24
chr193309849233098528-intron-Distal,intron-Proximal5.1464313.75908K562AQR
chr193312533733125485-intron-Distal3.945595.78672K562HNRNPM
chr193316544533165551-intron-Distal4.450806.46853K562EFTUD2
chr193311011933110166-intron-Distal,intron-Proximal4.828326.48405K562AQR
chr193313454433134607-intron-Distal,intron-Proximal3.091263.90287HepG2SF3B4
chr193311921533119334-intron-Distal3.251244.13258K562RBFOX2
chr193310032233100451-intron-Distal4.097303.01445K562EXOSC5
chr193309852833098541-intron-Distal,intron-Proximal4.179318.65427K562AQR
chr193309843233098477-intron-Distal,intron-Proximal4.582403.62536K562AQR
chr193310565733105735-intron-Distal4.550576.02873K562TARDBP
chr193313439633134453-intron-Distal,intron-Proximal6.1987712.75970K562EFTUD2
chr193312625333126364-intron-Distal3.459144.65797K562TARDBP
chr193313518733135229-intron-Distal,intron-Proximal4.204433.49003K562PRPF8
chr193309097633091066-intron-Distal,intron-Proximal3.881263.02234K562KHSRP
chr193311808533118187-intron-Distal3.338205.47574K562TARDBP
chr193310324233103364-intron-Distal4.796564.93238K562QKI
chr193309282333092908-intron-Distal,intron-Proximal3.203346.93011K562KHSRP
chr193313425833134311-intron-Distal,intron-Proximal5.115756.47067K562SF3B4
chr193316591433165971-intron-Distal3.238343.18246K562PRPF8
chr193311882833118891-intron-Distal,intron-Proximal3.678914.65388K562PRPF8
chr193311007433110119-intron-Distal,intron-Proximal4.992114.65563K562AQR
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for ANKRD27 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for ANKRD27 is not available on ENCORE database.

  • 67 RBPs can affect the levels of ANKRD27.  








The Knockdown/knockout RNA-Seq assay for ANKRD27 is not available on ENCORE database.





67 RBPs can affect the gene expression of ANKRD27 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
ANKRD27ENSG00000105186.10521.27540666.14950-0.353802.999302.20440HepG2AKAP8L
ANKRD27ENSG00000105186.10924.23170670.860000.462103.296402.43880HepG2ASCC1
ANKRD27ENSG00000105186.10728.566201110.24400-0.6077010.056208.88280HepG2AUH
ANKRD27ENSG00000105186.10557.48260662.87590-0.249801.877501.31520HepG2CKAP4
ANKRD27ENSG00000105186.10351.32530691.00660-0.975906.967505.75490HepG2CNOT7
ANKRD27ENSG00000105186.10439.08740586.13430-0.416703.121201.89670HepG2DDX1
ANKRD27ENSG00000105186.10418.67540567.20500-0.438002.859702.17160HepG2DDX21
ANKRD27ENSG00000105186.10364.45140570.13380-0.645604.057203.14020HepG2DDX55
ANKRD27ENSG00000105186.10515.03650704.28900-0.451502.362601.42870HepG2DDX5
ANKRD27ENSG00000105186.101036.68490667.116700.635905.170204.35040HepG2DDX6
ANKRD27ENSG00000105186.10404.67620569.69120-0.493405.237104.38530HepG2DNAJC2
ANKRD27ENSG00000105186.10372.89650558.00310-0.581503.807302.73960HepG2EEF2
ANKRD27ENSG00000105186.101138.43960708.848300.683406.196605.24420HepG2EIF4A3
ANKRD27ENSG00000105186.10607.88470835.10320-0.458204.603203.56510HepG2EIF4G1
ANKRD27ENSG00000105186.10299.62100403.30090-0.428702.367001.54620HepG2GEMIN5
ANKRD27ENSG00000105186.10429.45670580.23690-0.434102.635702.00250HepG2HNRNPA1
ANKRD27ENSG00000105186.10629.48030777.90560-0.305402.283101.42590HepG2HNRNPA2B1
ANKRD27ENSG00000105186.10462.10300645.41820-0.482003.353202.59640HepG2HNRNPC
ANKRD27ENSG00000105186.10453.41440641.15020-0.499805.298204.48040HepG2HNRNPU
ANKRD27ENSG00000105186.101164.17520674.359300.787609.052907.91010HepG2IGF2BP2
ANKRD27ENSG00000105186.10860.89660655.806400.392502.446801.76450HepG2PABPC4
ANKRD27ENSG00000105186.10600.77070801.19810-0.415303.007902.39100HepG2PUF60
ANKRD27ENSG00000105186.101185.87510849.898400.480505.725904.77250HepG2PUM2
ANKRD27ENSG00000105186.10519.02870675.40180-0.379903.629002.94340HepG2PUS1
ANKRD27ENSG00000105186.10790.67770571.013000.469501.931701.33240HepG2RAVER1
ANKRD27ENSG00000105186.10699.830601065.47060-0.606406.632805.91390HepG2RBM22
ANKRD27ENSG00000105186.10586.58490845.95370-0.528206.248905.49140HepG2NELFE
ANKRD27ENSG00000105186.10643.88170787.85060-0.291102.371801.79480HepG2RECQL
ANKRD27ENSG00000105186.10307.96890440.76560-0.517203.361602.69200HepG2RPS19
ANKRD27ENSG00000105186.10340.93850632.71730-0.892009.453508.04840HepG2RPS2
ANKRD27ENSG00000105186.10478.75600693.96360-0.535603.050002.21100HepG2RPS3A
ANKRD27ENSG00000105186.10636.22850464.452000.453903.024902.28880HepG2SF3B1
ANKRD27ENSG00000105186.10405.61000665.83050-0.7151010.922809.77940HepG2SMN1
ANKRD27ENSG00000105186.10591.634901203.38050-1.0243027.5290026.37480HepG2SRFBP1
ANKRD27ENSG00000105186.10603.23930826.05410-0.453505.002304.41480HepG2SRSF1
ANKRD27ENSG00000105186.10654.31870791.10600-0.273901.990801.44890HepG2SRSF5
ANKRD27ENSG00000105186.10613.72780742.43540-0.274701.933901.45060HepG2TAF15
ANKRD27ENSG00000105186.10302.60660457.40040-0.596003.903103.05850HepG2TARDBP
ANKRD27ENSG00000105186.10320.35430622.95260-0.9595012.8143011.87360HepG2TIAL1
ANKRD27ENSG00000105186.10561.11360678.34180-0.273702.068101.44920HepG2UPF1
ANKRD27ENSG00000105186.10536.39590697.22700-0.378303.286902.15520HepG2UTP18
ANKRD27ENSG00000105186.10467.90130644.22930-0.461404.850704.00300HepG2ZC3H8
ANKRD27ENSG00000105186.101236.185802830.63180-1.1952027.9059026.24560K562AQR
ANKRD27ENSG00000105186.101546.709901845.17280-0.254603.011102.01150K562BCLAF1
ANKRD27ENSG00000105186.101338.581101617.88310-0.273403.091201.68480K562DDX27
ANKRD27ENSG00000105186.102808.088503321.22990-0.242102.916102.01480K562DKC1
ANKRD27ENSG00000105186.10763.602601074.42200-0.492704.421302.69170K562DNAJC21
ANKRD27ENSG00000105186.101067.839401571.42300-0.557405.667804.33220K562EFTUD2
ANKRD27ENSG00000105186.101682.579302052.59120-0.286803.591702.19310K562EIF2S1
ANKRD27ENSG00000105186.101569.682202055.83600-0.389303.645502.66240K562FIP1L1
ANKRD27ENSG00000105186.10898.753801224.45600-0.446103.393502.37380K562FTO
ANKRD27ENSG00000105186.101748.539303166.79400-0.8569018.2300016.22330K562GRSF1
ANKRD27ENSG00000105186.10860.678901757.00520-1.0296021.6979020.10720K562HNRNPC
ANKRD27ENSG00000105186.10975.081401568.92220-0.686209.744007.55480K562HNRNPF
ANKRD27ENSG00000105186.101328.398301690.97780-0.348202.310501.46480K562HNRNPM
ANKRD27ENSG00000105186.101516.753502093.52630-0.464905.879204.46230K562MATR3
ANKRD27ENSG00000105186.102596.933604065.16300-0.6465010.429308.34780K562MSI2
ANKRD27ENSG00000105186.101034.135902036.99050-0.9780034.1118031.82680K562MTPAP
ANKRD27ENSG00000105186.101065.366401737.09020-0.705307.955006.54540K562PCBP3
ANKRD27ENSG00000105186.10771.306601332.41190-0.7887013.4239011.72900K562POLR2G
ANKRD27ENSG00000105186.10986.430201529.17170-0.632506.928505.74080K562PRPF8
ANKRD27ENSG00000105186.101337.578302038.14680-0.607609.654308.46820K562PTBP1
ANKRD27ENSG00000105186.103421.800704161.18890-0.282202.428201.66560K562PUF60
ANKRD27ENSG00000105186.103431.797104336.66550-0.337605.636404.24920K562PUM2
ANKRD27ENSG00000105186.102285.639203060.94490-0.421404.199203.55130K562PUS1
ANKRD27ENSG00000105186.101548.710601954.29010-0.335602.843701.99080K562RBM22
ANKRD27ENSG00000105186.101477.449802056.58930-0.477104.702803.23370K562NELFE
ANKRD27ENSG00000105186.101708.547801380.037300.308004.186902.24510K562RPS10
ANKRD27ENSG00000105186.101167.676401557.74370-0.415802.821001.99630K562RPS19
ANKRD27ENSG00000105186.101285.208901626.77590-0.340002.294801.39360K562RPS3
ANKRD27ENSG00000105186.101490.972101835.02040-0.299503.013002.11950K562SF3B4
ANKRD27ENSG00000105186.101383.319101998.07350-0.530507.257006.12180K562SRSF1
ANKRD27ENSG00000105186.101804.326101336.437700.433005.399004.24500K562SYNCRIP
ANKRD27ENSG00000105186.101575.702502022.15890-0.359902.948602.21850K562TARDBP
ANKRD27ENSG00000105186.101172.345601515.20390-0.370102.608001.70130K562TIAL1
ANKRD27ENSG00000105186.102182.347502702.57930-0.308504.056802.51640K562TROVE2
ANKRD27ENSG00000105186.101122.771701567.10960-0.481004.224502.93880K562UCHL5
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for ANKRD27 is not available on ENCORE database.





10 RBPs can affect the splicing of ANKRD27 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SEANKRD27ENSG00000105186.10chr19-331373643313752133135230331353853314058733140698-0.205000.000000.00008excludedK562SRSF1
SEANKRD27ENSG00000105186.10chr19-331498193314995133140587331406983316597633166075-0.101000.000830.01807excludedK562SF3B4
SEANKRD27ENSG00000105186.10chr19-331373643313752133135230331353853314058733140698-0.110000.005640.08103excludedK562SF3B4
SEANKRD27ENSG00000105186.10chr19-331340283313410533132929331330513313419233134258-0.056000.004070.06321excludedK562SF3B4
SEANKRD27ENSG00000105186.10chr19-331498193314995133140587331406983316597633166075-0.054000.005070.04708excludedK562AQR
SEANKRD27ENSG00000105186.10chr19-331340283313410533132929331330513313419233134258-0.089000.000100.00297excludedK562U2AF2
SEANKRD27ENSG00000105186.10chr19-331373643313752133135230331353853314058733140698-0.104000.002520.08985excludedK562HNRNPK
SEANKRD27ENSG00000105186.10chr19-331340283313410533132929331330513313419233134258-0.094000.000620.01290excludedK562HNRNPC
A3SSANKRD27ENSG00000105186.10chr19-3309292033093072330929203309303233095168330953300.070000.001280.00866longerK562AQR
A3SSANKRD27ENSG00000105186.10chr19-3313736433137542331373643313752133140587331406980.056000.000850.00599longerK562AQR
A3SSANKRD27ENSG00000105186.10chr19-3309087733090985330908773309095633092920330930320.104000.000000.00005longerK562AQR
A3SSANKRD27ENSG00000105186.10chr19-3309516833095363330951683309533033096740330968600.082000.000820.00580longerK562AQR
MXEANKRD27ENSG00000105186.10chr19-33134336331343903313447733134537331341923313425833135230331353850.127000.000270.007361includedK562DROSHA
MXEANKRD27ENSG00000105186.10chr19-3309854033098738331065633310668633096740330968603310849433108539-0.181000.004450.050752includedK562DROSHA
MXEANKRD27ENSG00000105186.10chr19-33134336331343903313447733134639331341923313425833135230331353850.054000.000480.004801includedK562AQR
MXEANKRD27ENSG00000105186.10chr19-3309854033098738331065633310668633096740330968603310849433108539-0.157000.004200.077962includedK562TARDBP
MXEANKRD27ENSG00000105186.10chr19-3311761733117733331189883311907133116779331168723311962733119755-0.333000.003570.073972includedHepG2XRN2
MXEANKRD27ENSG00000105186.10chr19-33106563331066863310849433108539330985403309873833110165331102850.196000.000010.002761includedK562PUM1

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for ANKRD27 is not avaliable on ENCORE database.