ZDHHC4

General Information

Gene Name       : ZDHHC4
Gene ID             : ENSG00000136247.14
Essential Gene : No

Functions

Localization

Domains (AlphaFold: ZDHHC4)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878ZDHHC4ENSG00000136247.1416.1224.2320.18ENCSR000AEF
HepG2ZDHHC4ENSG00000136247.1473.6968.9871.34ENCSR985KAT
K562ZDHHC4ENSG00000136247.1446.4447.8347.13ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for ZDHHC4 is not avaliable on ENCORE database.



Proteins bound to RNA
  • ZDHHC4 RNA is bound by 7 proteins.  







eCLIP assay for ZDHHC4 is not avaliable on ENCORE database.





7 proteins are bound to ZDHHC4 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr766171036617144+5'-UTR,intron-Proximal6.185208.97384HepG2DDX3X
chr766183026618336+5'-UTR4.487403.44458K562DDX3X
chr766182836618345+5'-UTR3.791076.06436HepG2BCLAF1
chr766172336617353+5'-UTR,intron-Distal,intron-Proximal3.7456718.42485HepG2DDX3X
chr766172686617353+5'-UTR,intron-Distal,intron-Proximal3.855885.06399K562DDX3X
chr766171106617169+5'-UTR,intron-Proximal4.107707.08947HepG2PRPF8
chr766172126617233+5'-UTR,intron-Distal,intron-Proximal3.312794.61051HepG2DDX3X
chr766181586618230+5'-UTR,intron-Proximal3.236445.48399K562DDX3X
chr766230616623073+CDS,intron-Proximal5.027315.69951K562AQR
chr766246736624794+CDS4.697667.44583HepG2YBX3
chr766248386624890+CDS4.437445.64460HepG2GRWD1
chr766246976624790+CDS3.073675.97777HepG2PPIG
chr766246806624829+CDS3.192804.95206HepG2GRWD1
chr766230506623142+CDS,intron-Proximal5.2015212.09955HepG2PRPF8
chr766230396623071+CDS,intron-Proximal3.039793.03237HepG2AQR
chr766217026621742+CDS,intron-Proximal3.247365.58482K562YBX3
chr766230736623105+intron-Proximal4.221836.48405K562AQR
chr766230716623100+intron-Proximal5.057604.97857HepG2AQR
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for ZDHHC4 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for ZDHHC4 is not available on ENCORE database.

  • 74 RBPs can affect the levels of ZDHHC4.  








The Knockdown/knockout RNA-Seq assay for ZDHHC4 is not available on ENCORE database.





74 RBPs can affect the gene expression of ZDHHC4 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
ZDHHC4ENSG00000136247.101081.942601269.03600-0.230102.325101.75930HepG2ACO1
ZDHHC4ENSG00000136247.10471.40210824.14240-0.805908.814007.16150HepG2ADAR
ZDHHC4ENSG00000136247.101591.788402458.99090-0.627406.008605.25910HepG2AKAP1
ZDHHC4ENSG00000136247.10959.409201274.87190-0.410103.721202.84440HepG2AKAP8L
ZDHHC4ENSG00000136247.10642.71300424.597300.598004.852104.08800HepG2BOP1
ZDHHC4ENSG00000136247.101568.264701933.02240-0.301702.064601.38980HepG2CIRBP
ZDHHC4ENSG00000136247.101074.847501268.60820-0.239102.600301.95110HepG2CKAP4
ZDHHC4ENSG00000136247.101110.573301607.97360-0.533903.016802.21500HepG2CNOT7
ZDHHC4ENSG00000136247.10597.22480389.791800.615502.366101.72330HepG2CPSF6
ZDHHC4ENSG00000136247.101229.729001484.40440-0.271502.644902.01440HepG2CELF1
ZDHHC4ENSG00000136247.101925.783301596.002100.270904.132303.25490HepG2DAZAP1
ZDHHC4ENSG00000136247.10765.211001073.76850-0.488804.595803.74690HepG2DDX21
ZDHHC4ENSG00000136247.101476.083102355.54160-0.674307.852506.84990HepG2DDX3X
ZDHHC4ENSG00000136247.10629.87980863.74160-0.455502.634301.87720HepG2DDX55
ZDHHC4ENSG00000136247.10410.62690747.40460-0.864108.862707.33460HepG2EIF3D
ZDHHC4ENSG00000136247.10808.912101013.99670-0.326002.557101.51950HepG2EIF3G
ZDHHC4ENSG00000136247.101239.830702092.99620-0.755406.705105.66650HepG2EIF4B
ZDHHC4ENSG00000136247.101320.739301574.63770-0.253702.517501.71090HepG2EIF4G1
ZDHHC4ENSG00000136247.101491.074602168.90050-0.540605.415804.46930HepG2FXR1
ZDHHC4ENSG00000136247.101573.767302011.99890-0.354402.420901.79680HepG2G3BP1
ZDHHC4ENSG00000136247.10460.77450665.45250-0.530304.045502.95020HepG2GEMIN5
ZDHHC4ENSG00000136247.10593.43390441.827400.425502.214301.63850HepG2GPKOW
ZDHHC4ENSG00000136247.10678.29910837.80830-0.304701.871301.32820HepG2HNRNPA1
ZDHHC4ENSG00000136247.101071.62280771.959000.473105.696104.71270HepG2HNRNPF
ZDHHC4ENSG00000136247.101216.028601453.80630-0.257703.058802.35200HepG2HNRNPL
ZDHHC4ENSG00000136247.10667.94670421.646900.663605.327504.48390HepG2HNRNPLL
ZDHHC4ENSG00000136247.101116.36100760.147600.554406.118505.08250HepG2IGF2BP1
ZDHHC4ENSG00000136247.101348.939002045.16200-0.600406.393705.40490HepG2IGF2BP2
ZDHHC4ENSG00000136247.101020.475001919.25950-0.911303.885802.72110HepG2IGF2BP3
ZDHHC4ENSG00000136247.101336.860102169.65740-0.698608.207007.08900HepG2MAGOH
ZDHHC4ENSG00000136247.101262.775102181.80870-0.788909.227808.13020HepG2MATR3
ZDHHC4ENSG00000136247.10670.883601000.98850-0.577302.863102.04080HepG2MSI2
ZDHHC4ENSG00000136247.10610.89350430.094900.506202.419201.51940HepG2MTPAP
ZDHHC4ENSG00000136247.101575.948502233.20900-0.502904.532903.73190HepG2NCBP2
ZDHHC4ENSG00000136247.101254.901101937.98600-0.6270011.2470010.15660HepG2PCBP1
ZDHHC4ENSG00000136247.101129.024201971.86820-0.8045016.2975015.18260HepG2PTBP1
ZDHHC4ENSG00000136247.101158.033501510.75480-0.383603.483102.82420HepG2PUF60
ZDHHC4ENSG00000136247.101737.559802135.80590-0.297703.405902.72230HepG2QKI
ZDHHC4ENSG00000136247.10259.585601059.51140-2.0291024.0854022.21180HepG2RAVER1
ZDHHC4ENSG00000136247.101406.754801702.15050-0.275002.737602.22160HepG2RBM22
ZDHHC4ENSG00000136247.101426.837401938.29650-0.442005.359004.44900HepG2RBM25
ZDHHC4ENSG00000136247.10624.34930987.84310-0.661905.923404.36690HepG2RCC2
ZDHHC4ENSG00000136247.101088.855702194.58730-1.0111022.4433021.19130HepG2NELFE
ZDHHC4ENSG00000136247.101520.565702043.80140-0.426606.728605.82810HepG2RECQL
ZDHHC4ENSG00000136247.101077.79070831.763600.373702.486201.83280HepG2RPLP0
ZDHHC4ENSG00000136247.10516.55260727.30880-0.493704.143403.40670HepG2RPS19
ZDHHC4ENSG00000136247.10951.930901268.13820-0.413802.090801.50360HepG2SF3A3
ZDHHC4ENSG00000136247.10620.50330417.328700.572203.955003.12410HepG2SF3B1
ZDHHC4ENSG00000136247.101496.671202053.15770-0.456106.759705.89960HepG2SF3B4
ZDHHC4ENSG00000136247.10737.42140961.40240-0.382704.962604.14230HepG2SMN1
ZDHHC4ENSG00000136247.10751.19890464.358000.693904.027603.07620HepG2SNRNP70
ZDHHC4ENSG00000136247.101543.683201922.52800-0.316604.881204.26970HepG2SRFBP1
ZDHHC4ENSG00000136247.10860.015902142.97520-1.3172032.1613030.93660HepG2SRSF1
ZDHHC4ENSG00000136247.101075.918001491.68800-0.471407.372206.41710HepG2SRSF5
ZDHHC4ENSG00000136247.101058.70210758.464500.481003.203102.46040HepG2SRSF7
ZDHHC4ENSG00000136247.101203.281301743.35830-0.534908.717307.83420HepG2SRSF9
ZDHHC4ENSG00000136247.101375.554501669.22970-0.279203.392102.83720HepG2SSB
ZDHHC4ENSG00000136247.101446.974701696.42790-0.229502.510801.91290HepG2SUCLG1
ZDHHC4ENSG00000136247.101468.155001925.97630-0.391605.311904.57650HepG2TAF15
ZDHHC4ENSG00000136247.10560.28900411.059900.446702.745802.02370HepG2TARDBP
ZDHHC4ENSG00000136247.10933.429301124.64660-0.268902.726002.03090HepG2UPF1
ZDHHC4ENSG00000136247.10839.289801085.79920-0.371504.187903.47500HepG2UTP3
ZDHHC4ENSG00000136247.10699.115001165.22720-0.737005.749104.25720HepG2XRCC6
ZDHHC4ENSG00000136247.10970.522901236.89330-0.349905.013804.33190HepG2ZNF622
ZDHHC4ENSG00000136247.10931.372001170.48230-0.329703.553502.92400K562AGGF1
ZDHHC4ENSG00000136247.10896.841701217.92630-0.441504.080503.28550K562AKAP8L
ZDHHC4ENSG00000136247.10489.17610358.604100.447902.907302.10430K562CPSF6
ZDHHC4ENSG00000136247.10512.84510724.85930-0.499202.977201.90090K562EIF3D
ZDHHC4ENSG00000136247.10803.40550605.891100.407002.987702.10440K562FIP1L1
ZDHHC4ENSG00000136247.101548.082401174.629800.398203.690902.82170K562GRSF1
ZDHHC4ENSG00000136247.101506.46560821.394200.8749013.3659011.66180K562HSPD1
ZDHHC4ENSG00000136247.10994.835901292.57200-0.377702.012301.31740K562KIF1C
ZDHHC4ENSG00000136247.101136.098501448.00040-0.350003.340502.32410K562MBNL1
ZDHHC4ENSG00000136247.10460.55590334.201300.462602.715201.84870K562METAP2
ZDHHC4ENSG00000136247.10840.44300671.811800.323003.090102.23810K562MTPAP
ZDHHC4ENSG00000136247.10807.90020657.343800.297402.039501.35190K562POLR2G
ZDHHC4ENSG00000136247.10850.843301207.94630-0.505604.496603.82740K562PUS1
ZDHHC4ENSG00000136247.10986.948901176.88080-0.253902.058701.53300K562RBM15
ZDHHC4ENSG00000136247.10585.14940788.90730-0.431103.524502.73370K562SRSF1
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for ZDHHC4 is not available on ENCORE database.





21 RBPs can affect the splicing of ZDHHC4 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SEZDHHC4ENSG00000136247.10chr7+6617220661735166171116617129661819666183510.439000.000000.00000includedHepG2HNRNPK
SEZDHHC4ENSG00000136247.10chr7+6617220661735166171116617129661819666183510.206000.000280.02958includedHepG2DDX6
SEZDHHC4ENSG00000136247.10chr7+661722066173516617111661712966181966618351-0.325000.000010.00044excludedHepG2SRSF1
SEZDHHC4ENSG00000136247.10chr7+661722066173516617111661712966181966618351-0.211000.000270.03909excludedHepG2SSB
SEZDHHC4ENSG00000136247.10chr7+6617220661735166171116617129661819666183510.230000.000090.00413includedK562AGGF1
SEZDHHC4ENSG00000136247.10chr7+6617220661735166171116617129661819666183510.328000.000010.02132includedHepG2NOLC1
A5SSZDHHC4ENSG00000136247.10chr7+6622936662317566229366623062662464666248910.066000.000400.01789longerK562PUS1
A5SSZDHHC4ENSG00000136247.10chr7+6622936662317566229366623062662464666248910.070000.002430.03980longerK562AQR
A5SSZDHHC4ENSG00000136247.10chr7+6617098661735166170986617129661819666183770.455000.000000.00000longerHepG2HNRNPK
A5SSZDHHC4ENSG00000136247.10chr7+661709866173516617098661712966181966618377-0.321000.000010.00160shorterHepG2SRSF1
A5SSZDHHC4ENSG00000136247.10chr7+6622936662317566229366623062662464666248910.111000.000080.01270longerK562EFTUD2
A5SSZDHHC4ENSG00000136247.10chr7+6617098661735166170986617129661819666183770.203000.000570.08868longerHepG2DDX6
RIZDHHC4ENSG00000136247.10chr7+6617064661735166170646617129661722066173510.233000.000220.00399includedHepG2SF3A3
RIZDHHC4ENSG00000136247.10chr7+661706466173516617064661712966172206617351-0.230000.000030.00066excludedK562AGGF1
RIZDHHC4ENSG00000136247.10chr7+661706466173516617064661712966172206617351-0.159000.000490.08082excludedHepG2RBM15
RIZDHHC4ENSG00000136247.10chr7+661706466173516617064661712966172206617351-0.191000.001060.01188excludedK562AKAP8L
RIZDHHC4ENSG00000136247.10chr7+6617064661735166170646617129661722066173510.193000.001010.01170includedHepG2U2AF1
RIZDHHC4ENSG00000136247.10chr7+661706466173516617064661712966172206617351-0.193000.001530.01836excludedK562RBM15
RIZDHHC4ENSG00000136247.10chr7+6617064661735166170646617129661722066173510.225000.004340.06134includedHepG2FUBP3
MXEZDHHC4ENSG00000136247.10chr7+66181966618351662018566203096617220661735166212376621311-0.084000.003540.056302includedHepG2U2AF1
MXEZDHHC4ENSG00000136247.10chr7+66181966618377662018566203096617098661735166212376621311-0.101000.000430.010822includedHepG2U2AF1
MXEZDHHC4ENSG00000136247.10chr7+66172206617351661813166183516617064661712966201856620309-0.151000.000030.005562includedHepG2FUBP3
MXEZDHHC4ENSG00000136247.10chr7+66181966618351662018566203096617220661735166212376621311-0.096000.003110.055672includedHepG2SRSF1
MXEZDHHC4ENSG00000136247.10chr7+661722066173516618131661835166170646617129662018566203090.120000.000010.010231includedHepG2IGF2BP1
MXEZDHHC4ENSG00000136247.10chr7+661722066173516618131661835166170646617129662018566203090.390000.000040.006281includedHepG2NOLC1
MXEZDHHC4ENSG00000136247.10chr7+661722066173516618131661835166170646617129662018566203090.217000.000210.011911includedK562SBDS
MXEZDHHC4ENSG00000136247.10chr7+661722066173516618131661835166170646617129662018566203090.112000.000060.025601includedK562PUM2
MXEZDHHC4ENSG00000136247.10chr7+661813166183516620185662030966171356617351662123766213110.075000.001780.063051includedK562HNRNPU
MXEZDHHC4ENSG00000136247.10chr7+661722066173516618131661835166170646617129662018566203090.061000.001910.084561includedHepG2DDX3X
MXEZDHHC4ENSG00000136247.10chr7+661722066173516618131661835166170646617129662018566203090.191000.000160.016311includedHepG2LARP4
MXEZDHHC4ENSG00000136247.10chr7+66181966618351662018566203096617220661735166212376621311-0.109000.000160.077332includedHepG2BUD13

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for ZDHHC4 is not avaliable on ENCORE database.