WIPF3

General Information

Gene Name       : WIPF3
Gene ID             : ENSG00000122574.10
Essential Gene : No

Functions

Localization

Domains (AlphaFold: WIPF3)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878WIPF3ENSG00000122574.100.000.000.00ENCSR000AEF
HepG2WIPF3ENSG00000122574.100.030.010.02ENCSR985KAT
K562WIPF3ENSG00000122574.101.401.471.44ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for WIPF3 is not avaliable on ENCORE database.



Proteins bound to RNA
  • WIPF3 RNA is bound by 12 proteins.  







eCLIP assay for WIPF3 is not avaliable on ENCORE database.





12 proteins are bound to WIPF3 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr72995591329955987+3'-UTR4.419094.36811K562FAM120A
chr72995531429955395+3'-UTR3.035653.69775K562YBX3
chr72992367929923755+CDS4.184276.83369K562ILF3
chr72992367829923780+CDS3.697908.75945K562HNRNPK
chr72992420629924255+CDS,intron-Proximal3.592936.51619K562AQR
chr72992366029923821+CDS4.5927530.99827K562PCBP1
chr72991873729918833+CDS,intron-Proximal3.372203.91614K562BUD13
chr72992342029923500+CDS,intron-Proximal3.961335.47851K562SF3B4
chr72991549329915542+CDS3.182153.24816K562YBX3
chr72992763229927713+CDS,intron-Proximal4.9728710.52912K562SF3B4
chr72992368329923795+CDS3.393134.45086K562DROSHA
chr72992400129924052+CDS4.835467.59520K562PCBP1
chr72992492529925048+intron-Distal4.9481315.96455K562HNRNPL
chr72992498529925040+intron-Distal4.143437.75673K562AGGF1
chr72992153829921703+intron-Distal4.137624.18579K562MATR3
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for WIPF3 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for WIPF3 is not available on ENCORE database.

  • 80 RBPs can affect the levels of WIPF3.  








The Knockdown/knockout RNA-Seq assay for WIPF3 is not available on ENCORE database.





80 RBPs can affect the gene expression of WIPF3 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
WIPF3ENSG00000122574.68.933600.480604.216101.862501.34570HepG2DDX6
WIPF3ENSG00000122574.628.498406.892302.047702.750102.11000HepG2GPKOW
WIPF3ENSG00000122574.621.197305.640801.909801.951601.39750HepG2HNRNPA1
WIPF3ENSG00000122574.634.641303.453303.326305.989105.01520HepG2PUM2
WIPF3ENSG00000122574.621.960006.646401.724102.044501.49650HepG2PUS1
WIPF3ENSG00000122574.626.964907.314101.882202.426001.77950HepG2RPLP0
WIPF3ENSG00000122574.633.788501.233204.776007.326806.38310HepG2RPS19
WIPF3ENSG00000122574.638.220206.512102.553004.880403.96530HepG2SF3B1
WIPF3ENSG00000122574.621.221106.060301.807902.056901.61250HepG2TIAL1
WIPF3ENSG00000122574.6135.93150245.72880-0.854203.208101.92430K562AARS
WIPF3ENSG00000122574.6691.45000448.851000.623305.109603.43480K562ABCF1
WIPF3ENSG00000122574.6683.48490191.348701.836608.255505.37680K562ADAR
WIPF3ENSG00000122574.6757.89890506.714800.580706.998106.15460K562AGGF1
WIPF3ENSG00000122574.6728.65460556.794800.388002.700501.73400K562AKAP8
WIPF3ENSG00000122574.6760.78600527.257700.528904.512503.67040K562AKAP8L
WIPF3ENSG00000122574.6241.60950377.13210-0.642403.715802.25310K562APOBEC3C
WIPF3ENSG00000122574.6730.19140305.162101.258606.132605.31820K562AQR
WIPF3ENSG00000122574.6680.93460553.216400.299602.127801.33440K562ATP5C1
WIPF3ENSG00000122574.6365.37390224.529300.702405.965004.53600K562BCLAF1
WIPF3ENSG00000122574.6335.85490187.381000.841804.503903.09150K562CCAR1
WIPF3ENSG00000122574.6651.74750427.937600.606804.378002.46620K562CEBPZ
WIPF3ENSG00000122574.61031.84010515.399701.0014011.890208.92830K562CKAP4
WIPF3ENSG00000122574.61157.56520429.051901.431809.804807.78030K562CNOT7
WIPF3ENSG00000122574.6598.14790412.881700.534702.906902.10420K562CPSF6
WIPF3ENSG00000122574.6294.01310170.338800.787405.065103.56780K562CSTF2
WIPF3ENSG00000122574.61281.41950525.485501.2859029.5484026.91990K562CELF1
WIPF3ENSG00000122574.6885.93650491.920800.848707.188305.20310K562DDX21
WIPF3ENSG00000122574.6752.21990464.201500.696309.878308.73720K562DDX47
WIPF3ENSG00000122574.6346.03270254.827300.441302.699301.41360K562DDX6
WIPF3ENSG00000122574.6419.59850209.783101.000008.941206.40210K562DHX30
WIPF3ENSG00000122574.6301.18400201.493700.579802.831301.46950K562DNAJC21
WIPF3ENSG00000122574.6121.11660229.62070-0.922906.315605.29430K562EIF2S2
WIPF3ENSG00000122574.6397.75960190.594701.061306.043504.52300K562EIF3A
WIPF3ENSG00000122574.6584.02200427.397200.450303.659002.58050K562EIF4G2
WIPF3ENSG00000122574.6713.85210426.705600.742308.242906.03700K562EXOSC5
WIPF3ENSG00000122574.6520.45600356.207600.547003.025402.06440K562FTO
WIPF3ENSG00000122574.6144.30330273.08590-0.920306.809305.92030K562FXR1
WIPF3ENSG00000122574.6449.09320738.03020-0.716703.874601.34310K562FXR2
WIPF3ENSG00000122574.6359.20010199.090200.851305.295903.31030K562GEMIN5
WIPF3ENSG00000122574.6656.81640299.491201.1329014.3682012.08280K562GLRX3
WIPF3ENSG00000122574.6667.69040394.156200.760303.375302.50090K562GPKOW
WIPF3ENSG00000122574.6412.55020305.953400.431202.058201.39980K562GRSF1
WIPF3ENSG00000122574.6995.56590385.235801.3697012.226008.73200K562HNRNPA0
WIPF3ENSG00000122574.6591.90780259.820101.1878014.9947012.81430K562HNRNPA1
WIPF3ENSG00000122574.6609.49310268.599601.1821015.2236013.90610K562HNRNPC
WIPF3ENSG00000122574.6277.36910437.42820-0.657204.779903.74130K562HSPD1
WIPF3ENSG00000122574.6693.23180559.559300.308902.252601.51850K562KIF1C
WIPF3ENSG00000122574.61162.72490336.676201.788007.806406.14630K562KRR1
WIPF3ENSG00000122574.6531.07390384.759100.464902.192701.41240K562METAP2
WIPF3ENSG00000122574.6591.39760314.873100.9093012.9286011.33870K562MTPAP
WIPF3ENSG00000122574.6976.78980349.867901.4811047.3370044.92460K562NSUN2
WIPF3ENSG00000122574.6770.04860412.198100.901502.882401.62030K562PABPC1
WIPF3ENSG00000122574.6522.40660318.385600.714302.286301.40330K562PABPN1
WIPF3ENSG00000122574.6798.27420542.765600.556504.087403.07500K562PCBP3
WIPF3ENSG00000122574.6309.33480188.203500.716803.471501.40650K562PES1
WIPF3ENSG00000122574.6701.69210382.032300.877003.682401.57160K562PPIL4
WIPF3ENSG00000122574.6172.46030241.74550-0.487202.355201.73490K562PTBP1
WIPF3ENSG00000122574.6691.41530522.909500.402902.743702.20210K562PUS1
WIPF3ENSG00000122574.6787.42220509.484500.628007.388906.45170K562RBM15
WIPF3ENSG00000122574.6155.58430243.96590-0.649003.367202.14790K562NELFE
WIPF3ENSG00000122574.6377.41070196.745600.939705.689904.51420K562RPS19
WIPF3ENSG00000122574.6864.98620383.047101.175103.707701.86920K562RPS3A
WIPF3ENSG00000122574.6440.77720197.481401.158208.340706.09940K562RRP9
WIPF3ENSG00000122574.6971.69880390.918301.313504.666302.57750K562SBDS
WIPF3ENSG00000122574.6602.95530345.207200.8045010.238908.74360K562SF3A3
WIPF3ENSG00000122574.6792.83110375.017701.0800010.856208.84030K562SF3B1
WIPF3ENSG00000122574.6350.57260226.786400.628304.675303.55260K562SF3B4
WIPF3ENSG00000122574.6607.37650206.362801.5573023.8722020.62230K562SLBP
WIPF3ENSG00000122574.6297.59640208.460000.513502.388901.45350K562SRFBP1
WIPF3ENSG00000122574.6896.04970353.670101.3411034.9988032.44230K562SRPK2
WIPF3ENSG00000122574.6962.99960439.100601.1329013.5283010.91770K562SRSF7
WIPF3ENSG00000122574.6673.32150473.822500.506804.498702.54110K562SRSF9
WIPF3ENSG00000122574.6699.04080387.197400.852208.146005.94040K562STAU1
WIPF3ENSG00000122574.6827.31570382.628701.112405.787303.46790K562STIP1
WIPF3ENSG00000122574.6606.68520406.876800.576305.377403.36580K562SUCLG1
WIPF3ENSG00000122574.6280.25350186.941100.584002.384701.44530K562SUPV3L1
WIPF3ENSG00000122574.6286.58980417.58770-0.543103.769402.81090K562SYNCRIP
WIPF3ENSG00000122574.6493.62390231.648701.0914010.376808.46380K562TIAL1
WIPF3ENSG00000122574.6730.75540377.483800.9529010.993008.19930K562TRIP6
WIPF3ENSG00000122574.6291.72420218.332800.418002.073601.37920K562U2AF2
WIPF3ENSG00000122574.6329.29760197.929300.734303.966702.72460K562UCHL5
WIPF3ENSG00000122574.6598.93380370.971100.691008.249107.09040K562UPF1
WIPF3ENSG00000122574.6830.09000421.476600.9777011.042408.84820K562UTP3
WIPF3ENSG00000122574.6872.09310317.430201.4579030.1042027.46320K562WDR3
WIPF3ENSG00000122574.6643.59820330.076800.9633016.5413014.71600K562WDR43
WIPF3ENSG00000122574.6329.61170201.665900.708703.710502.23700K562XRN2
WIPF3ENSG00000122574.6749.09420343.626001.124203.344102.38360K562ZC3H8
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for WIPF3 is not available on ENCORE database.






No RBPs affect the alternative splcing events of WIPF3 on ENCORE database.





The Knockdown/knockout RNA-Seq assay for WIPF3 is not avaliable on ENCORE database.