SNX15

General Information

Gene Name       : SNX15
Gene ID             : ENSG00000110025.12
Essential Gene : No

Functions

Localization

Domains (AlphaFold: SNX15)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878SNX15ENSG00000110025.120.2210.085.15ENCSR000AEF
HepG2SNX15ENSG00000110025.1220.2112.6516.43ENCSR985KAT
K562SNX15ENSG00000110025.1217.8413.5015.67ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for SNX15 is not avaliable on ENCORE database.



Proteins bound to RNA
  • SNX15 RNA is bound by 1 proteins.  







eCLIP assay for SNX15 is not avaliable on ENCORE database.





1 proteins are bound to SNX15 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr116480236564802379+3'-UTR,CDS,intron-Distal3.664073.22721K562YBX3
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for SNX15 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for SNX15 is not available on ENCORE database.

  • 91 RBPs can affect the levels of SNX15.  








The Knockdown/knockout RNA-Seq assay for SNX15 is not available on ENCORE database.





91 RBPs can affect the gene expression of SNX15 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
SNX15ENSG00000110025.8470.50180300.617300.646204.706701.93860HepG2CEBPZ
SNX15ENSG00000110025.8583.28190352.806700.725206.190304.58650HepG2CPSF7
SNX15ENSG00000110025.8207.91440124.613600.738403.556302.09100HepG2DDX47
SNX15ENSG00000110025.8622.39000484.346600.361702.800302.11940HepG2DKC1
SNX15ENSG00000110025.8311.1968073.166202.088505.205904.27030HepG2DNAJC21
SNX15ENSG00000110025.8310.8421072.413602.101705.237504.38560HepG2DNAJC2
SNX15ENSG00000110025.8587.83510159.757101.879403.554402.51740HepG2EEF2
SNX15ENSG00000110025.8542.87470325.018200.740006.315904.61560HepG2EIF2S2
SNX15ENSG00000110025.8260.6965064.569002.013402.935102.07690HepG2EIF4G1
SNX15ENSG00000110025.8735.79300897.30200-0.286302.453001.88110HepG2ETF1
SNX15ENSG00000110025.8463.46270115.314502.006805.073803.85630HepG2GEMIN5
SNX15ENSG00000110025.8428.42030298.493700.521203.093802.08960HepG2HNRNPM
SNX15ENSG00000110025.8309.0860081.586501.921502.541801.96080HepG2HNRNPU
SNX15ENSG00000110025.8132.53580209.52580-0.660702.512601.34640HepG2HSPD1
SNX15ENSG00000110025.8243.8214083.344001.548602.355501.67150HepG2ILF2
SNX15ENSG00000110025.891.67910209.36020-1.191303.011101.70970HepG2KRR1
SNX15ENSG00000110025.8389.0329077.673102.324309.481407.50710HepG2LARP7
SNX15ENSG00000110025.8364.48890178.448001.030305.716303.69230HepG2NOLC1
SNX15ENSG00000110025.8197.4864036.008602.455208.750405.23280HepG2NUFIP2
SNX15ENSG00000110025.8249.9655090.534501.465102.443501.46530HepG2PCBP2
SNX15ENSG00000110025.8456.9569072.774902.650409.090507.80300HepG2PPIL4
SNX15ENSG00000110025.8500.8884061.940103.0154011.9887010.86650HepG2PUF60
SNX15ENSG00000110025.8203.5675065.759601.630108.285207.37320HepG2PUM1
SNX15ENSG00000110025.8527.4359065.706903.004805.158704.25600HepG2PUM2
SNX15ENSG00000110025.8306.75510170.489900.847304.713302.39740HepG2RBM14
SNX15ENSG00000110025.8409.4138093.685302.127607.980606.28660HepG2RBM27
SNX15ENSG00000110025.8341.9955085.952601.992303.533002.46720HepG2RPS10
SNX15ENSG00000110025.8333.7252086.360501.950106.506105.30920HepG2RPS2
SNX15ENSG00000110025.8362.5647088.200702.039303.422502.22490HepG2RPS5
SNX15ENSG00000110025.895.9014035.002501.454002.824601.45500HepG2SF1
SNX15ENSG00000110025.8688.32850476.847100.529502.669002.00730HepG2SF3A3
SNX15ENSG00000110025.8483.8974059.406103.0259012.4058011.10220HepG2SLBP
SNX15ENSG00000110025.8359.6900089.755502.002605.951704.50430HepG2SMNDC1
SNX15ENSG00000110025.8429.72580847.08770-0.9791018.5680017.57390HepG2SRFBP1
SNX15ENSG00000110025.8530.4547061.165703.1163079.8347077.17320HepG2SRSF5
SNX15ENSG00000110025.8254.79850524.35980-1.041203.084002.50710HepG2SRSF9
SNX15ENSG00000110025.8958.22960735.488400.381603.544102.97990HepG2SSB
SNX15ENSG00000110025.8574.2655069.554703.0454083.1685080.72500HepG2SUCLG1
SNX15ENSG00000110025.867.14730211.34990-1.6542010.677608.13730HepG2SUGP2
SNX15ENSG00000110025.8421.26490292.090500.528202.619401.70360HepG2SUPT6H
SNX15ENSG00000110025.837.86340579.22750-3.9353026.1536024.66200HepG2TAF15
SNX15ENSG00000110025.8724.35240205.045801.820604.639603.28380HepG2TBRG4
SNX15ENSG00000110025.8447.5204079.409302.494502.222701.76470HepG2TIAL1
SNX15ENSG00000110025.8223.8755079.976701.484902.476301.93600HepG2TRIM56
SNX15ENSG00000110025.8386.2562060.524902.6739042.5574039.35230HepG2TUFM
SNX15ENSG00000110025.8954.30470370.118501.3664021.0616019.26610HepG2U2AF1
SNX15ENSG00000110025.8309.2886064.072602.271102.203901.46180HepG2UBE2L3
SNX15ENSG00000110025.8467.03860582.14600-0.317802.107601.60040K562AGGF1
SNX15ENSG00000110025.8388.01980635.56970-0.711908.266906.55810K562ATP5C1
SNX15ENSG00000110025.8452.57780270.969200.739906.159704.99160K562CPSF6
SNX15ENSG00000110025.81011.34880155.976102.6968031.5854029.63150K562DDX47
SNX15ENSG00000110025.8361.02640172.752901.063304.465502.34280K562DDX51
SNX15ENSG00000110025.8343.56500165.663801.052204.078602.49190K562EEF2
SNX15ENSG00000110025.8429.48070160.141501.4231011.107309.14200K562EFTUD2
SNX15ENSG00000110025.8665.22970317.844101.065406.835205.20270K562EIF3A
SNX15ENSG00000110025.8616.73730171.594201.845608.332106.37870K562EIF3D
SNX15ENSG00000110025.8349.53470154.061501.181805.760304.62620K562EIF3G
SNX15ENSG00000110025.8615.76980293.336401.069703.765402.76570K562FIP1L1
SNX15ENSG00000110025.8380.45490275.732000.464402.371801.57850K562FMR1
SNX15ENSG00000110025.8416.94910317.437500.393302.333401.76940K562FXR1
SNX15ENSG00000110025.8822.18510654.244400.329502.053201.39600K562GRSF1
SNX15ENSG00000110025.8553.70440423.614900.386302.588101.54810K562HNRNPA1
SNX15ENSG00000110025.8551.85220247.471201.156901.961401.44770K562HNRNPC
SNX15ENSG00000110025.8141.46310226.93990-0.681902.981401.69840K562HNRNPK
SNX15ENSG00000110025.8534.29730140.876101.923109.659207.57820K562HNRNPL
SNX15ENSG00000110025.8819.26460397.573001.043003.482502.59230K562HSPD1
SNX15ENSG00000110025.8424.72310642.85740-0.598002.645101.84020K562KIF1C
SNX15ENSG00000110025.8531.22600720.16150-0.439003.540802.49350K562MBNL1
SNX15ENSG00000110025.8395.80820252.522500.648304.327603.21580K562METAP2
SNX15ENSG00000110025.8226.33870504.78030-1.157203.640302.59580K562NAA15
SNX15ENSG00000110025.8369.09210157.470701.228805.401103.44660K562NONO
SNX15ENSG00000110025.8682.29300479.146100.509806.026604.98420K562NSUN2
SNX15ENSG00000110025.8457.27620250.944900.865602.951401.91840K562PABPN1
SNX15ENSG00000110025.8495.26660664.41820-0.423902.465201.68130K562PCBP3
SNX15ENSG00000110025.8342.77720151.656301.176405.762003.09500K562PES1
SNX15ENSG00000110025.8608.47230333.127400.869002.336401.58410K562PPIG
SNX15ENSG00000110025.8416.83250155.832801.4194011.210409.69160K562PRPF8
SNX15ENSG00000110025.8426.44080767.88970-0.8486011.137908.92950K562PUM1
SNX15ENSG00000110025.8687.90640158.828402.1146034.6133031.88320K562RPS19
SNX15ENSG00000110025.8496.98440261.787200.924705.948304.41450K562RPS3
SNX15ENSG00000110025.8431.28790159.436001.435608.187905.95960K562RRP9
SNX15ENSG00000110025.8518.01560280.188000.886502.808201.49320K562SFPQ
SNX15ENSG00000110025.8367.60860155.484101.241307.612104.69850K562SRP68
SNX15ENSG00000110025.8377.09600252.628700.577802.475701.48690K562SRSF4
SNX15ENSG00000110025.8386.41420151.049901.355005.968004.43160K562SUPV3L1
SNX15ENSG00000110025.8337.09210230.211500.550102.973302.24000K562TARDBP
SNX15ENSG00000110025.8296.18260137.588301.106005.055502.82670K562TFIP11
SNX15ENSG00000110025.8346.48870222.070400.641704.211603.17100K562TIA1
SNX15ENSG00000110025.8501.81890213.455201.233102.203601.37770K562TIAL1
SNX15ENSG00000110025.8307.21680217.966300.495102.457801.44120K562TRA2A
SNX15ENSG00000110025.8332.13360159.782601.055604.871003.47990K562UCHL5
SNX15ENSG00000110025.8642.32760508.046800.338202.646001.94310K562UPF1
SNX15ENSG00000110025.8574.80440434.722800.402902.708601.84130K562WDR3
SNX15ENSG00000110025.8665.26000452.039600.557406.734405.46870K562WDR43
SNX15ENSG00000110025.8372.79720162.569101.197204.830203.07110K562XRN2
SNX15ENSG00000110025.839.56180310.27120-2.971303.896001.87250K562YTHDC2
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for SNX15 is not available on ENCORE database.





4 RBPs can affect the splicing of SNX15 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SESNX15ENSG00000110025.8chr11+648060436480630164802991648031356480715764808044-0.360000.000000.00000excludedHepG2U2AF1
SESNX15ENSG00000110025.8chr11+647996396479967564795011647951086479990264800023-0.158000.000000.00000excludedHepG2U2AF1
SESNX15ENSG00000110025.8chr11+648025306480267864802318648024346480299164806301-0.393000.000040.00128excludedHepG2U2AF1
SESNX15ENSG00000110025.8chr11+648060436480630164802991648031356480715764808044-0.278000.000000.00007excludedHepG2SRSF1
SESNX15ENSG00000110025.8chr11+647996396479967564795011647951086479990264800023-0.122000.001060.02025excludedK562HNRNPC
RISNX15ENSG00000110025.8chr11+6480299164806301648029916480313564806043648063010.074000.004600.04181includedHepG2RBM22

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for SNX15 is not avaliable on ENCORE database.