SIVA1

General Information

Gene Name       : SIVA1
Gene ID             : ENSG00000184990.12
Essential Gene : No

Functions

Localization

Domains (AlphaFold: SIVA1)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878SIVA1ENSG00000184990.122.525.203.86ENCSR000AEF
HepG2SIVA1ENSG00000184990.12125.786.7266.25ENCSR985KAT
K562SIVA1ENSG00000184990.1231.715.2218.46ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for SIVA1 is not avaliable on ENCORE database.



Proteins bound to RNA
  • SIVA1 RNA is bound by 10 proteins.  







eCLIP assay for SIVA1 is not avaliable on ENCORE database.





10 proteins are bound to SIVA1 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr14105225859105225900+3'-UTR,intron-Distal5.4644119.22875HepG2LARP4
chr14105225776105225853+3'-UTR,CDS,intron-Distal4.4063628.26671HepG2LARP4
chr14105225900105225945+3'-UTR,intron-Distal5.6903912.06469HepG2LARP4
chr14105225778105225882+3'-UTR,CDS,intron-Distal4.715325.51254HepG2RPS3
chr14105219488105219657+5'-UTR,CDS,intron-Proximal4.1550132.01619K562DDX3X
chr14105219537105219657+5'-UTR,CDS,intron-Proximal4.3815222.14261HepG2LARP4
chr14105219526105219662+5'-UTR,CDS,intron-Proximal3.590686.66729HepG2DDX55
chr14105219494105219586+5'-UTR,CDS5.90701400.00000HepG2DDX3X
chr14105221963105222081+CDS,intron-Distal,intron-Proximal3.6239113.18532K562DDX3X
chr14105222940105223020+CDS,intron-Proximal4.3381819.01322HepG2LARP4
chr14105222961105223097+CDS3.026408.14182K562DDX3X
chr14105223064105223144+CDS,intron-Proximal4.695637.79098HepG2PRPF8
chr14105221966105222026+CDS,intron-Distal,intron-Proximal3.690144.41690HepG2RPS3
chr14105221965105221974+CDS,intron-Distal,intron-Proximal3.841277.71063HepG2LARP4
chr14105222969105223070+CDS3.759843.08342HepG2AKAP1
chr14105219585105219653+CDS3.245723.50122K562DDX55
chr14105219615105219704+CDS,intron-Proximal3.127606.15485HepG2PRPF8
chr14105223020105223078+CDS5.3409927.90717HepG2LARP4
chr14105225763105225776+CDS,intron-Distal,intron-Proximal3.6978010.22807HepG2LARP4
chr14105221974105222084+CDS,intron-Distal3.5992518.85063HepG2LARP4
chr14105222053105222105+CDS,intron-Distal3.393457.24294K562YBX3
chr14105223078105223098+CDS,intron-Proximal5.8139914.76894HepG2LARP4
chr14105223093105223196+CDS,intron-Proximal4.065707.90583K562AQR
chr14105221965105222075+CDS,intron-Distal,intron-Proximal5.72802400.00000HepG2DDX3X
chr14105219586105219656+CDS5.75208400.00000HepG2DDX3X
chr14105222939105223098+CDS,intron-Proximal4.9270367.44572HepG2DDX3X
chr14105225691105225771+CDS,intron-Distal,intron-Proximal3.582633.73688K562SMNDC1
chr14105222075105222160+CDS,intron-Distal6.3612238.99928HepG2DDX3X
chr14105222966105223090+CDS4.2970713.44487HepG2RPS3
chr14105225667105225769+CDS,intron-Distal,intron-Proximal3.764574.70265HepG2AQR
chr14105222026105222091+CDS,intron-Distal5.188095.99789HepG2RPS3
chr14105219715105219771+intron-Distal,intron-Proximal3.362793.82121HepG2RBM22
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for SIVA1 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for SIVA1 is not available on ENCORE database.

  • 83 RBPs can affect the levels of SIVA1.  








The Knockdown/knockout RNA-Seq assay for SIVA1 is not available on ENCORE database.





83 RBPs can affect the gene expression of SIVA1 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
SIVA1ENSG00000184990.8491.76080761.09810-0.630109.168208.19250HepG2ACO1
SIVA1ENSG00000184990.8271.04040141.742100.935102.408001.47560HepG2ADAR
SIVA1ENSG00000184990.8632.82720764.59520-0.272902.136801.45150HepG2AKAP8L
SIVA1ENSG00000184990.8646.60760946.64770-0.549905.643304.72220HepG2AUH
SIVA1ENSG00000184990.8174.70050263.57050-0.593303.052702.24540HepG2CALR
SIVA1ENSG00000184990.8434.37810760.83800-0.8086014.5458013.27110HepG2CKAP4
SIVA1ENSG00000184990.8224.46880142.731200.653103.536402.74810HepG2DNAJC21
SIVA1ENSG00000184990.8297.42890141.462301.0720011.213009.99750HepG2DNAJC2
SIVA1ENSG00000184990.8583.05770357.650400.705006.162404.97010HepG2EIF4G2
SIVA1ENSG00000184990.8596.36980743.64480-0.318402.128701.39750HepG2EWSR1
SIVA1ENSG00000184990.8328.45240495.35050-0.592801.963601.30830HepG2FIP1L1
SIVA1ENSG00000184990.8267.72280656.68420-1.2945019.1571017.16840HepG2FUBP3
SIVA1ENSG00000184990.8257.21950153.289900.746603.520101.96070HepG2HNRNPA0
SIVA1ENSG00000184990.8287.98490160.280100.845302.140501.52130HepG2HNRNPC
SIVA1ENSG00000184990.8495.71240344.705900.524005.038304.15050HepG2HNRNPL
SIVA1ENSG00000184990.8231.98080159.220600.542902.906402.28630HepG2HNRNPU
SIVA1ENSG00000184990.8399.04020283.932900.490903.429302.62960HepG2IGF2BP1
SIVA1ENSG00000184990.81014.75520653.020500.635801.902801.35340HepG2MAGOH
SIVA1ENSG00000184990.8398.91010225.846200.820606.089103.98450HepG2NIP7
SIVA1ENSG00000184990.8540.01540375.244300.525104.539103.56370HepG2NOL12
SIVA1ENSG00000184990.8303.70870165.502600.875704.102003.00680HepG2PABPC1
SIVA1ENSG00000184990.8438.29520142.012601.625808.052206.84460HepG2PPIL4
SIVA1ENSG00000184990.8208.59220286.00070-0.455302.501501.76200HepG2PRPF4
SIVA1ENSG00000184990.8442.68630631.16250-0.511705.453404.74010HepG2PTBP1
SIVA1ENSG00000184990.8748.77530358.210701.0636015.3385014.08870HepG2PUF60
SIVA1ENSG00000184990.8560.00710380.264900.558306.471205.64370HepG2PUM1
SIVA1ENSG00000184990.8490.20860775.21390-0.6612010.152209.09890HepG2PUS1
SIVA1ENSG00000184990.8484.68480683.53240-0.496004.321403.56580HepG2QKI
SIVA1ENSG00000184990.8335.11320908.49150-1.4388021.3743020.20730HepG2RBM22
SIVA1ENSG00000184990.8640.82360301.220401.089009.399007.55010HepG2RBM27
SIVA1ENSG00000184990.8489.29500244.605401.000103.083201.96310HepG2RCC2
SIVA1ENSG00000184990.8447.58450277.783900.688104.243003.25940HepG2RPS2
SIVA1ENSG00000184990.8366.91480181.977701.011606.753905.51280HepG2RPS3A
SIVA1ENSG00000184990.8453.96650283.579800.678704.126202.80080HepG2RPS5
SIVA1ENSG00000184990.8473.15000141.794701.738408.034207.02260HepG2SAFB2
SIVA1ENSG00000184990.8411.62330171.357201.264207.498205.40580HepG2SART3
SIVA1ENSG00000184990.8729.13250343.485601.085804.378603.52500HepG2SLBP
SIVA1ENSG00000184990.8255.32100165.359400.626603.953403.20650HepG2SMN1
SIVA1ENSG00000184990.8625.146801026.07100-0.714908.889308.13150HepG2SRFBP1
SIVA1ENSG00000184990.8236.16290685.87550-1.5382031.8573030.63590HepG2SRSF1
SIVA1ENSG00000184990.8689.87180353.691000.9637016.3918015.04590HepG2SRSF5
SIVA1ENSG00000184990.8337.92850558.00580-0.723609.022608.12820HepG2SRSF9
SIVA1ENSG00000184990.81193.46010890.808500.421903.508402.94660HepG2SSB
SIVA1ENSG00000184990.8270.13420158.381100.770203.165301.98180HepG2STIP1
SIVA1ENSG00000184990.8595.70100402.235500.566406.448405.56850HepG2SUCLG1
SIVA1ENSG00000184990.8214.49020616.52240-1.5232028.3421026.79240HepG2TAF15
SIVA1ENSG00000184990.8354.73000566.46750-0.675306.668905.37470HepG2TIA1
SIVA1ENSG00000184990.8261.56040154.723200.757403.936803.36240HepG2TIAL1
SIVA1ENSG00000184990.8311.42310156.094900.996409.627308.67340HepG2TRIM56
SIVA1ENSG00000184990.8718.69460349.970501.038004.138503.04610HepG2TUFM
SIVA1ENSG00000184990.8286.38330423.58550-0.564701.986501.44450HepG2U2AF1
SIVA1ENSG00000184990.8304.12720163.010900.899605.288403.76770HepG2XPO5
SIVA1ENSG00000184990.8608.59160301.457201.013403.079502.31510HepG2XRN2
SIVA1ENSG00000184990.8388.25740561.60430-0.532505.821605.10500HepG2ZNF622
SIVA1ENSG00000184990.8633.12500301.260001.0714017.2581015.96270K562AGGF1
SIVA1ENSG00000184990.8490.92520331.039400.568403.286902.19210K562AKAP8
SIVA1ENSG00000184990.8565.96330313.474800.852303.968403.18510K562AKAP8L
SIVA1ENSG00000184990.8797.85850574.309300.474203.276101.92430K562APOBEC3C
SIVA1ENSG00000184990.81793.61310708.089901.3408010.564409.52860K562AQR
SIVA1ENSG00000184990.8222.55470324.78480-0.545303.078301.48030K562CEBPZ
SIVA1ENSG00000184990.8476.00670366.773400.376002.624601.54750K562CPEB4
SIVA1ENSG00000184990.8357.13270190.239200.908507.387905.53630K562CSTF2
SIVA1ENSG00000184990.8275.55150379.56610-0.462003.227902.53250K562DDX47
SIVA1ENSG00000184990.8446.21220321.885200.471103.411401.91840K562DDX6
SIVA1ENSG00000184990.8288.45900197.032300.549802.491201.62770K562EFTUD2
SIVA1ENSG00000184990.8212.40200124.164800.774404.170403.20110K562EIF3G
SIVA1ENSG00000184990.8371.75540254.151300.548603.316102.38220K562FIP1L1
SIVA1ENSG00000184990.8496.06710344.940300.524103.358902.70120K562FXR1
SIVA1ENSG00000184990.8322.33580192.126500.746402.535801.38330K562HNRNPA2B1
SIVA1ENSG00000184990.8326.08650209.061000.641203.420602.37680K562HNRNPM
SIVA1ENSG00000184990.8311.38500148.516601.068008.111206.63590K562MAGOH
SIVA1ENSG00000184990.8299.29240148.182401.014102.175701.36730K562MATR3
SIVA1ENSG00000184990.8230.09090331.22090-0.525603.050701.76090K562NCBP2
SIVA1ENSG00000184990.8329.17360181.724000.857003.728401.97600K562NUSAP1
SIVA1ENSG00000184990.8466.79550168.142401.473009.214407.04090K562PABPN1
SIVA1ENSG00000184990.8430.54310288.537900.577303.914202.91330K562PPIG
SIVA1ENSG00000184990.8394.66370199.987300.980604.320702.34790K562PPP1R8
SIVA1ENSG00000184990.8364.78340191.736600.927802.948702.17610K562PRPF8
SIVA1ENSG00000184990.8284.75700165.377300.783904.350903.17730K562PSIP1
SIVA1ENSG00000184990.8331.59380144.309401.200207.394906.34640K562PTBP1
SIVA1ENSG00000184990.8746.98190310.880701.2646017.1203015.81120K562PUS1
SIVA1ENSG00000184990.8493.69530302.906600.704606.689605.79350K562RBM15
SIVA1ENSG00000184990.8358.09280138.257301.372906.037504.73440K562RBM22
SIVA1ENSG00000184990.8294.84400153.820200.938603.418302.04400K562SF1
SIVA1ENSG00000184990.8199.2108080.980701.298509.059507.46350K562SF3B4
SIVA1ENSG00000184990.859.65960114.01410-0.934403.248801.50380K562SND1
SIVA1ENSG00000184990.8214.99960143.142800.586802.270401.36190K562SRFBP1
SIVA1ENSG00000184990.8411.67160141.495601.5406019.2918017.43570K562SRSF1
SIVA1ENSG00000184990.8273.04580133.692101.030106.628404.89110K562SRSF5
SIVA1ENSG00000184990.8387.44710143.150401.436407.319806.10900K562TARDBP
SIVA1ENSG00000184990.8330.87940138.098501.2605010.851009.11350K562TIA1
SIVA1ENSG00000184990.8290.64210135.639601.099408.405806.21080K562TRA2A
SIVA1ENSG00000184990.8299.26560395.45260-0.402102.498001.69200K562WDR43
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for SIVA1 is not available on ENCORE database.





1 RBPs can affect the splicing of SIVA1 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SESIVA1ENSG00000184990.8chr14+1052219661052221611052194831052196561052229401052238160.200000.000310.06639includedHepG2ILF3

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for SIVA1 is not avaliable on ENCORE database.