SDCCAG8

General Information

Gene Name       : SDCCAG8
Gene ID             : ENSG00000054282.15
Essential Gene : No

Functions

Localization

Domains (AlphaFold: SDCCAG8)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878SDCCAG8ENSG00000054282.1511.6413.6712.66ENCSR000AEF
HepG2SDCCAG8ENSG00000054282.154.586.545.56ENCSR985KAT
K562SDCCAG8ENSG00000054282.1512.6516.8414.75ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for SDCCAG8 is not avaliable on ENCORE database.



Proteins bound to RNA
  • SDCCAG8 RNA is bound by 19 proteins.  







eCLIP assay for SDCCAG8 is not avaliable on ENCORE database.





19 proteins are bound to SDCCAG8 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr1243468709243468809+3'-UTR,intron-Distal3.322234.35650K562KHSRP
chr1243434292243434339+CDS,intron-Distal3.117363.12941K562UCHL5
chr1243471439243471526+CDS,intron-Proximal3.458623.18246K562PRPF8
chr1243589805243589857+CDS4.844365.03746HepG2BCLAF1
chr1243468039243468103+CDS,intron-Proximal3.984024.93978HepG2BCLAF1
chr1243542075243542123+CDS4.261623.38968HepG2BCLAF1
chr1243468049243468109+CDS,intron-Proximal3.603133.54718K562PRPF8
chr1243480083243480166+CDS3.305543.69481K562UCHL5
chr1243434339243434366+CDS,intron-Distal,intron-Proximal4.214554.16170K562UCHL5
chr1243589766243589845+CDS4.644365.44793K562ZNF622
chr1243507516243507570+CDS,intron-Proximal4.507035.29868K562UCHL5
chr1243471329243471397+CDS3.008143.55800HepG2BCLAF1
chr1243493841243493896+CDS,intron-Proximal3.337623.27569HepG2BCLAF1
chr1243433405243433446+CDS,intron-Distal,intron-Proximal3.906783.19539K562YBX3
chr1243471247243471346+CDS,intron-Proximal3.059684.04646K562PRPF8
chr1243589778243589857+CDS5.189887.69727K562UCHL5
chr1243475408243475468+intron-Distal4.672844.85866HepG2QKI
chr1243644354243644404+intron-Distal4.158353.59342K562CSTF2T
chr1243644143243644187+intron-Distal4.690444.57154HepG2FAM120A
chr1243475355243475467+intron-Distal5.102045.61339K562QKI
chr1243643944243643982+intron-Distal4.906325.84761K562FAM120A
chr1243424493243424536+intron-Distal4.778509.03914K562PTBP1
chr1243456867243456972+intron-Distal,intron-Proximal4.813807.66316K562KHSRP
chr1243644204243644259+intron-Distal6.181299.02011K562EIF4G2
chr1243428444243428560+intron-Distal3.667993.24603K562KHSRP
chr1243644546243644623+intron-Distal5.9175012.43562K562FAM120A
chr1243420354243420451+intron-Distal4.207304.79477K562KHSRP
chr1243644206243644262+intron-Distal5.7824313.49984K562CSTF2T
chr1243644205243644263+intron-Distal5.210125.24810K562GTF2F1
chr1243643732243643782+intron-Distal4.721405.44892HepG2FAM120A
chr1243644215243644262+intron-Distal6.6590822.02190K562FAM120A
chr1243438591243438636+intron-Distal5.243305.89856K562PTBP1
chr1243644006243644085+intron-Distal5.501667.22168HepG2FAM120A
chr1243424453243424538+intron-Distal4.338338.21761HepG2PTBP1
chr1243420904243421015+intron-Distal3.307644.56724K562KHSRP
chr1243644208243644260+intron-Distal5.214897.17413K562FTO
chr1243510448243510524+intron-Distal3.488073.69083K562PTBP1
chr1243644206243644215+intron-Distal6.1360414.34259K562FAM120A
chr1243643412243643531+intron-Distal5.2425314.20681K562FAM120A
chr1243643887243643907+intron-Distal4.437834.09144K562FAM120A
chr1243431824243431922+intron-Distal4.431035.62025K562KHSRP
chr1243599022243599093+intron-Distal4.122444.13641K562TARDBP
chr1243643887243643993+intron-Distal6.6188813.94592K562FASTKD2
chr1243656539243656627+intron-Distal4.077613.15816HepG2PRPF4
chr1243644204243644269+intron-Distal6.1951712.89523HepG2FAM120A
chr1243644365243644402+intron-Distal4.567284.01524K562FAM120A
chr1243456983243457056+intron-Distal4.554155.02888K562KHSRP
chr1243456631243456684+intron-Distal,intron-Proximal3.065883.51696K562KHSRP
chr1243460929243461018+intron-Distal4.191834.79379K562KHSRP
chr1243451415243451484+intron-Distal3.637888.10682K562KHSRP
chr1243656542243656636+intron-Distal3.895093.85148K562GTF2F1
chr1243644262243644313+intron-Distal4.664105.40707K562CSTF2T
chr1243644360243644390+intron-Distal4.073874.10564HepG2CSTF2T
chr1243644205243644261+intron-Distal5.4903112.30723HepG2CSTF2T
chr1243644552243644608+intron-Distal4.290893.30242K562FTO
chr1243483444243483580+intron-Distal4.657255.20135HepG2QKI
chr1243644528243644627+intron-Distal5.062028.58840K562CSTF2T
chr1243640922243641009+intron-Distal4.287574.01524K562FAM120A
chr1243644535243644599+intron-Distal5.103318.83237HepG2CSTF2T
chr1243643422243643517+intron-Distal4.905357.65828HepG2CSTF2T
chr1243475319243475408+intron-Distal4.776545.54528HepG2QKI
chr1243479759243479837+intron-Distal4.151573.35169HepG2U2AF2
chr1243644484243644534+intron-Distal3.499084.69054HepG2CSTF2T
chr1243644278243644303+intron-Distal4.664675.10887HepG2FAM120A
chr1243644261243644332+intron-Distal5.2795910.82255HepG2CSTF2T
chr1243449732243449815+intron-Distal,intron-Proximal4.327374.23094K562TIA1
chr1243644210243644268+intron-Distal4.451524.14056K562EWSR1
chr1243643923243643984+intron-Distal3.972433.30336K562EWSR1
chr1243643898243643992+intron-Distal5.6879322.69653HepG2FAM120A
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for SDCCAG8 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for SDCCAG8 is not available on ENCORE database.

  • 66 RBPs can affect the levels of SDCCAG8.  








The Knockdown/knockout RNA-Seq assay for SDCCAG8 is not available on ENCORE database.





66 RBPs can affect the gene expression of SDCCAG8 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
SDCCAG8ENSG00000054282.11378.43320238.306900.667104.725503.75140HepG2CALR
SDCCAG8ENSG00000054282.11260.12350189.304500.458402.671901.85100HepG2DDX19B
SDCCAG8ENSG00000054282.11277.70810172.941600.683203.642502.87290HepG2DDX21
SDCCAG8ENSG00000054282.11604.82980318.640900.9245013.6309012.46070HepG2ETF1
SDCCAG8ENSG00000054282.11184.20250272.93600-0.567302.592101.92300HepG2FXR1
SDCCAG8ENSG00000054282.11171.46660256.46330-0.580802.551401.87980HepG2HNRNPK
SDCCAG8ENSG00000054282.11345.82030256.370400.431702.033501.38720HepG2NSUN2
SDCCAG8ENSG00000054282.11257.98570168.759900.612203.635702.75940HepG2PRPF4
SDCCAG8ENSG00000054282.11206.93940120.432100.780902.930302.09980HepG2PRPF8
SDCCAG8ENSG00000054282.11431.51290266.329000.696105.933305.24570HepG2RBM22
SDCCAG8ENSG00000054282.11180.66680249.22950-0.464101.929201.35760HepG2RBM25
SDCCAG8ENSG00000054282.11142.05730255.34040-0.845903.375502.27420HepG2RBM27
SDCCAG8ENSG00000054282.11263.51230174.093600.597902.450201.69560HepG2RPS3A
SDCCAG8ENSG00000054282.11630.06890300.816201.066507.666206.94720HepG2SRFBP1
SDCCAG8ENSG00000054282.11333.69560247.703400.429802.392901.86510HepG2TAF15
SDCCAG8ENSG00000054282.11248.93550177.136400.490802.324901.85840HepG2TIAL1
SDCCAG8ENSG00000054282.11176.18750249.88490-0.504202.543601.96430HepG2UTP3
SDCCAG8ENSG00000054282.11267.39580166.547800.682904.558403.73090HepG2ZC3H8
SDCCAG8ENSG00000054282.11481.12610786.37250-0.708809.087208.13430K562AGGF1
SDCCAG8ENSG00000054282.11505.49430818.23340-0.694807.674306.53800K562AKAP8L
SDCCAG8ENSG00000054282.11255.42490596.86370-1.2245013.9682012.79350K562AQR
SDCCAG8ENSG00000054282.11652.56480858.48060-0.395703.981602.86810K562ATP5C1
SDCCAG8ENSG00000054282.11625.96370941.15270-0.588303.012601.89870K562CNOT7
SDCCAG8ENSG00000054282.11524.70120690.94180-0.397103.504102.25180K562CPEB4
SDCCAG8ENSG00000054282.11241.21340331.77800-0.459902.481101.49760K562DDX3X
SDCCAG8ENSG00000054282.111023.23560714.854800.517307.283606.29550K562DDX47
SDCCAG8ENSG00000054282.11695.73160880.62110-0.340002.845501.95770K562DKC1
SDCCAG8ENSG00000054282.11160.14390319.25450-0.995307.185105.65470K562EFTUD2
SDCCAG8ENSG00000054282.11623.73820436.844000.513705.004904.07870K562EIF2S2
SDCCAG8ENSG00000054282.11367.52630218.070700.753003.287002.18260K562EIF3A
SDCCAG8ENSG00000054282.11424.84460300.975900.497203.495302.60670K562EIF3G
SDCCAG8ENSG00000054282.11254.83610346.62070-0.443802.342001.58500K562EIF4A3
SDCCAG8ENSG00000054282.11251.29800360.47000-0.520503.432302.76840K562FXR1
SDCCAG8ENSG00000054282.11291.26950446.02230-0.614804.314603.32940K562GPKOW
SDCCAG8ENSG00000054282.11391.67900582.17100-0.571804.497503.53820K562GRSF1
SDCCAG8ENSG00000054282.11315.31730456.15620-0.532703.967602.68250K562HNRNPA1
SDCCAG8ENSG00000054282.11542.21980916.88950-0.757902.457501.32960K562HNRNPA2B1
SDCCAG8ENSG00000054282.11191.33520442.71860-1.2103012.9288011.71530K562HNRNPC
SDCCAG8ENSG00000054282.11250.99810395.33270-0.655404.480602.98630K562HNRNPF
SDCCAG8ENSG00000054282.11491.34390646.06160-0.394902.768601.71390K562HNRNPL
SDCCAG8ENSG00000054282.11310.38850505.11980-0.702605.811704.50360K562HNRNPU
SDCCAG8ENSG00000054282.11869.23360589.243700.560804.782703.74390K562HSPD1
SDCCAG8ENSG00000054282.11342.17550517.28790-0.596203.611102.37930K562IGF2BP2
SDCCAG8ENSG00000054282.11279.82790543.71850-0.9583011.473809.68070K562MAGOH
SDCCAG8ENSG00000054282.11374.73230542.62590-0.534104.371403.18780K562MATR3
SDCCAG8ENSG00000054282.11790.01030972.85010-0.300302.261201.45210K562MBNL1
SDCCAG8ENSG00000054282.11399.29550536.50090-0.426102.590101.80610K562MTPAP
SDCCAG8ENSG00000054282.11493.27520681.89040-0.467102.483001.65810K562NAA15
SDCCAG8ENSG00000054282.11433.54130802.51810-0.888402.874301.85930K562PABPN1
SDCCAG8ENSG00000054282.11350.59420483.78740-0.464602.878401.88100K562PCBP2
SDCCAG8ENSG00000054282.11158.73740310.67160-0.968706.310405.17840K562PRPF8
SDCCAG8ENSG00000054282.11333.08390528.25140-0.665306.345705.37500K562PTBP1
SDCCAG8ENSG00000054282.11652.74030931.17810-0.512504.732503.66830K562PUF60
SDCCAG8ENSG00000054282.11555.37680811.62660-0.547304.512903.84290K562PUS1
SDCCAG8ENSG00000054282.11485.64240790.67230-0.703209.187308.13040K562RBM15
SDCCAG8ENSG00000054282.11297.59910506.56780-0.767407.025505.61440K562RBM22
SDCCAG8ENSG00000054282.11468.29120316.448800.565303.199702.31980K562RPS19
SDCCAG8ENSG00000054282.11545.25720857.24960-0.652803.763201.91680K562SBDS
SDCCAG8ENSG00000054282.11427.06600588.16450-0.461803.544102.62940K562SF3A3
SDCCAG8ENSG00000054282.11262.51590424.16410-0.692204.263503.03650K562SF3B1
SDCCAG8ENSG00000054282.11206.22710385.23930-0.901508.722007.15630K562SF3B4
SDCCAG8ENSG00000054282.11400.79350895.50460-1.159803.938202.27110K562SFPQ
SDCCAG8ENSG00000054282.11465.14400842.74900-0.857402.565901.40080K562SNRNP200
SDCCAG8ENSG00000054282.11227.30520343.29630-0.594803.329902.17940K562SRFBP1
SDCCAG8ENSG00000054282.11388.29300602.57800-0.634005.171603.93800K562SRPK2
SDCCAG8ENSG00000054282.11240.24110517.85470-1.1081013.4168011.86110K562SRSF1
SDCCAG8ENSG00000054282.11180.46550300.78810-0.737003.963102.73120K562SUPV3L1
SDCCAG8ENSG00000054282.11253.25260524.11950-1.0493011.457909.86070K562TARDBP
SDCCAG8ENSG00000054282.11255.93390405.58110-0.664204.179902.96690K562TRIM56
SDCCAG8ENSG00000054282.11525.84340822.73930-0.645803.115001.70910K562UTP18
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for SDCCAG8 is not available on ENCORE database.





13 RBPs can affect the splicing of SDCCAG8 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SESDCCAG8ENSG00000054282.11chr1+2434563922434565212434496552434496992434680142434680790.294000.000310.00809includedK562SRSF1
SESDCCAG8ENSG00000054282.11chr1+243456392243456521243449655243449699243468014243468079-0.214000.000210.00916excludedK562AKAP8L
SESDCCAG8ENSG00000054282.11chr1+2434563922434565212434496552434496992434680142434680790.218000.007440.06430includedK562AQR
SESDCCAG8ENSG00000054282.11chr1+2434567002434567962434563922434565212434680142434680790.229000.000200.02185includedHepG2DDX3X
SESDCCAG8ENSG00000054282.11chr1+2434567002434567962434563922434565212434680142434680790.365000.000280.02851includedK562SUPV3L1
SESDCCAG8ENSG00000054282.11chr1+2434567002434567962434563922434565212434680142434680790.336000.000050.00569includedHepG2NCBP2
SESDCCAG8ENSG00000054282.11chr1+2434567002434567962434564232434565212434680142434680790.262000.000110.00755includedHepG2MATR3
SESDCCAG8ENSG00000054282.11chr1+2434567002434567962434563922434565212434680142434680790.211000.000320.07686includedK562PPIL4
SESDCCAG8ENSG00000054282.11chr1+2434567002434567962434563922434565212434680142434680790.231000.000740.05345includedHepG2IGF2BP3
SESDCCAG8ENSG00000054282.11chr1+2434567002434567962434563922434565212434680142434680790.622000.000040.00296includedK562SF3B1
SESDCCAG8ENSG00000054282.11chr1+2434567002434567962434564232434565212434680142434680790.357000.000010.00450includedK562EIF3G
SESDCCAG8ENSG00000054282.11chr1+243480056243480195243449573243449699243493841243493994-0.066000.000120.03010excludedK562NPM1
MXESDCCAG8ENSG00000054282.11chr1+243468014243468079243480056243480195243449573243449699243493841243493994-0.241000.000000.001272includedK562PUM2

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for SDCCAG8 is not avaliable on ENCORE database.