PER3

General Information

Gene Name       : PER3
Gene ID             : ENSG00000049246.14
Essential Gene : No

Functions

Localization

Domains (AlphaFold: PER3)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878PER3ENSG00000049246.140.160.240.20ENCSR000AEF
HepG2PER3ENSG00000049246.142.512.252.38ENCSR985KAT
K562PER3ENSG00000049246.1411.7412.5512.14ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for PER3 is not avaliable on ENCORE database.



Proteins bound to RNA
  • PER3 RNA is bound by 4 proteins.  







eCLIP assay for PER3 is not avaliable on ENCORE database.





4 proteins are bound to PER3 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr179045487904604+3'-UTR4.6535116.75955K562PUM2
chr179031327903249+3'-UTR3.263444.39499K562FAM120A
chr179033267903416+3'-UTR3.629475.49597K562IGF2BP1
chr179044547904526+3'-UTR3.459016.09630K562PUM2
chr178921607892328+intron-Distal3.166843.73266K562KHSRP
chr178932797893376+intron-Distal4.062554.10688K562KHSRP
chr178936857893809+intron-Distal3.906573.89294K562KHSRP
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for PER3 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for PER3 is not available on ENCORE database.

  • 85 RBPs can affect the levels of PER3.  








The Knockdown/knockout RNA-Seq assay for PER3 is not available on ENCORE database.





85 RBPs can affect the gene expression of PER3 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
PER3ENSG00000049246.10131.89820219.36680-0.733904.497103.75810HepG2ACO1
PER3ENSG00000049246.10175.50430109.543800.679902.803301.80080HepG2ADAR
PER3ENSG00000049246.10114.17830254.95650-1.159006.497805.72090HepG2AKAP1
PER3ENSG00000049246.10322.61490210.956700.612803.159002.31930HepG2ASCC1
PER3ENSG00000049246.10265.36050149.474600.828003.566002.69140HepG2CNOT7
PER3ENSG00000049246.10372.16020169.696301.132909.788708.57250HepG2CPSF6
PER3ENSG00000049246.10152.62760212.72930-0.479002.187501.60560HepG2CELF1
PER3ENSG00000049246.10361.39310228.774300.659505.515604.51750HepG2DAZAP1
PER3ENSG00000049246.10141.37680202.88800-0.521102.718301.89120HepG2DDX19B
PER3ENSG00000049246.10236.61720163.464900.533502.270501.64790HepG2DDX21
PER3ENSG00000049246.1073.69780155.93210-1.081203.171202.35170HepG2DDX55
PER3ENSG00000049246.10373.25930231.167900.691104.582903.29720HepG2DDX5
PER3ENSG00000049246.10210.64720106.382700.985505.933504.53700HepG2DHX30
PER3ENSG00000049246.10559.67760222.891701.3282014.5097013.07070HepG2EIF4A3
PER3ENSG00000049246.10320.38320216.837900.563102.770601.67640HepG2ESF1
PER3ENSG00000049246.10405.93560290.891300.480703.423802.76530HepG2ETF1
PER3ENSG00000049246.10441.71350146.373701.5934014.7606013.00680HepG2FUBP3
PER3ENSG00000049246.1095.60380167.63460-0.810203.071901.89500HepG2FUS
PER3ENSG00000049246.10358.94880208.612100.782904.991604.10960HepG2G3BP1
PER3ENSG00000049246.10450.27170221.460201.023608.959407.34300HepG2G3BP2
PER3ENSG00000049246.10446.15550192.373101.2135010.929809.71720HepG2GPKOW
PER3ENSG00000049246.10222.51700138.369100.685302.674601.58230HepG2GRSF1
PER3ENSG00000049246.10250.13020123.864501.013806.028105.03280HepG2HNRNPC
PER3ENSG00000049246.10285.11120185.989200.616203.904303.06670HepG2HNRNPF
PER3ENSG00000049246.10582.12980183.584301.6648023.1908021.65370HepG2HNRNPLL
PER3ENSG00000049246.10575.28650212.051901.4398018.1092016.55960HepG2IGF2BP2
PER3ENSG00000049246.10220.84460125.684100.813105.734404.71240HepG2ILF2
PER3ENSG00000049246.10315.50250213.283800.564802.351801.43930HepG2KHSRP
PER3ENSG00000049246.10279.30170200.535700.477902.851001.82040HepG2KIF1C
PER3ENSG00000049246.10510.51140224.954801.1822011.8718010.54790HepG2MAGOH
PER3ENSG00000049246.10316.19690231.546000.449401.855501.33020HepG2NCBP2
PER3ENSG00000049246.10276.31240162.776000.763304.020103.12280HepG2NSUN2
PER3ENSG00000049246.10438.11990206.214201.087109.754008.41730HepG2PABPC4
PER3ENSG00000049246.10295.36030214.275100.462902.482601.90070HepG2PCBP1
PER3ENSG00000049246.10317.74780181.833400.805206.856605.70090HepG2PRPF4
PER3ENSG00000049246.10166.06820229.69170-0.467902.072001.48650HepG2PUM2
PER3ENSG00000049246.10329.78720223.441000.561503.968703.25590HepG2PUS1
PER3ENSG00000049246.10525.32480236.150001.1534014.4665013.19550HepG2QKI
PER3ENSG00000049246.10357.78900214.309800.739302.826002.14520HepG2RBM25
PER3ENSG00000049246.10305.06330225.970000.432902.114801.56680HepG2RECQL
PER3ENSG00000049246.10418.07050150.427701.4746012.5417010.69450HepG2RPS10
PER3ENSG00000049246.10234.72060150.090500.645002.592101.81810HepG2RPS3A
PER3ENSG00000049246.10364.73500181.717501.005108.175407.02230HepG2SF3B1
PER3ENSG00000049246.1098.70290202.19070-1.034604.084603.12640HepG2SNRNP70
PER3ENSG00000049246.10782.09390238.406101.7138046.5526045.07640HepG2SSB
PER3ENSG00000049246.10330.68070212.942000.634904.185503.51750HepG2TAF15
PER3ENSG00000049246.10331.63660178.913800.890206.205705.18020HepG2TARDBP
PER3ENSG00000049246.10492.99270276.045000.836603.665302.44420HepG2TBRG4
PER3ENSG00000049246.10434.07660119.517001.8606028.7039027.40920HepG2TIAL1
PER3ENSG00000049246.10165.63430120.632600.457301.780601.30790HepG2TRIM56
PER3ENSG00000049246.10295.68640179.433900.720505.503704.60750HepG2ZC3H8
PER3ENSG00000049246.101203.310901626.18280-0.434504.041502.53900K562ABCF1
PER3ENSG00000049246.10690.39330860.97570-0.318602.918301.93390K562BCLAF1
PER3ENSG00000049246.10632.39520824.34980-0.382402.432301.61990K562BOP1
PER3ENSG00000049246.101141.334701416.60270-0.311702.328101.32140K562CPEB4
PER3ENSG00000049246.10700.94590876.48010-0.322402.309701.58660K562CPSF6
PER3ENSG00000049246.101758.794902116.32520-0.267002.189901.32340K562CELF1
PER3ENSG00000049246.10843.245101198.39030-0.507106.921805.43010K562DKC1
PER3ENSG00000049246.10438.46370587.33620-0.421702.633701.32790K562DNAJC21
PER3ENSG00000049246.10627.13510807.03680-0.363902.265801.44000K562EFTUD2
PER3ENSG00000049246.10507.62580766.07370-0.593707.793705.73170K562EIF2S1
PER3ENSG00000049246.10821.172801164.17750-0.503606.864205.80570K562EIF2S2
PER3ENSG00000049246.10858.209701168.89380-0.445703.987902.95780K562FIP1L1
PER3ENSG00000049246.10590.05060755.97880-0.357502.128401.33170K562FTO
PER3ENSG00000049246.101083.98290757.802700.516306.696005.81370K562FXR1
PER3ENSG00000049246.10642.10300836.79060-0.382102.744801.95340K562GPKOW
PER3ENSG00000049246.101100.419601551.42020-0.495505.564604.48910K562GRSF1
PER3ENSG00000049246.10602.45620972.83020-0.691308.982207.15370K562HNRNPA1
PER3ENSG00000049246.10648.34430800.90270-0.304901.893801.38850K562HNRNPC
PER3ENSG00000049246.10554.77240715.16500-0.366402.364001.32270K562HNRNPF
PER3ENSG00000049246.10682.543401077.29380-0.6584010.094908.40850K562HNRNPU
PER3ENSG00000049246.101241.313801584.81940-0.352502.880902.06970K562HSPD1
PER3ENSG00000049246.10626.09290816.81460-0.383602.727401.85790K562METAP2
PER3ENSG00000049246.10941.654901122.63100-0.253602.687801.95120K562NSUN2
PER3ENSG00000049246.10850.445001154.94870-0.441503.228802.33030K562PCBP3
PER3ENSG00000049246.10579.24570781.89730-0.432803.123601.59260K562PHF6
PER3ENSG00000049246.10639.25730885.88440-0.470704.408203.39410K562POLR2G
PER3ENSG00000049246.101015.507201326.87670-0.385803.087002.21390K562PPIG
PER3ENSG00000049246.10441.67270718.08140-0.701206.864805.32600K562PSIP1
PER3ENSG00000049246.101144.333501957.42910-0.7745017.1079014.81040K562PUM2
PER3ENSG00000049246.10662.31360930.16750-0.490004.344103.26140K562RBM22
PER3ENSG00000049246.10767.80660978.82810-0.350302.335501.34950K562NELFE
PER3ENSG00000049246.10469.48280800.00620-0.768906.623005.35020K562RPS19
PER3ENSG00000049246.101026.17770789.346500.378403.012401.88320K562SAFB
PER3ENSG00000049246.10925.264501134.77260-0.294503.347202.32890K562SRPK2
PER3ENSG00000049246.10711.68470950.84970-0.418003.637202.83210K562SRSF1
PER3ENSG00000049246.101082.590801402.81070-0.373802.686301.45940K562STAU1
PER3ENSG00000049246.10485.70160760.46840-0.646804.994303.59460K562SUPV3L1
PER3ENSG00000049246.101374.86360888.566000.629609.327607.81430K562SYNCRIP
PER3ENSG00000049246.10486.08770962.36820-0.9854013.6478011.84950K562TARDBP
PER3ENSG00000049246.10743.37300928.30060-0.320502.348501.60150K562TIA1
PER3ENSG00000049246.10983.102801214.49510-0.304903.223801.84670K562TROVE2
PER3ENSG00000049246.10618.75830804.81630-0.379302.265501.35310K562UCHL5
PER3ENSG00000049246.10919.326101190.34270-0.372702.478201.79690K562UPF1
PER3ENSG00000049246.101020.395901633.86110-0.679205.573804.27730K562ZC3H8
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for PER3 is not available on ENCORE database.






No RBPs affect the alternative splcing events of PER3 on ENCORE database.





The Knockdown/knockout RNA-Seq assay for PER3 is not avaliable on ENCORE database.