NUP133

General Information

Gene Name       : NUP133
Gene ID             : ENSG00000069248.11
Essential Gene : Yes

Functions

Localization

Domains (AlphaFold: NUP133)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878NUP133ENSG00000069248.1122.3316.4219.38ENCSR000AEF
HepG2NUP133ENSG00000069248.1112.9721.7617.37ENCSR985KAT
K562NUP133ENSG00000069248.1127.1529.6928.42ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for NUP133 is not avaliable on ENCORE database.



Proteins bound to RNA
  • NUP133 RNA is bound by 24 proteins.  







eCLIP assay for NUP133 is not avaliable on ENCORE database.





24 proteins are bound to NUP133 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr1229577516229577592-3'-UTR,intron-Distal,intron-Proximal5.5339026.40673K562PUM2
chr1229577348229577433-3'-UTR,intron-Distal,intron-Proximal3.695863.54602K562TIA1
chr1229577374229577482-3'-UTR,intron-Distal,intron-Proximal7.5250329.01401HepG2SUB1
chr1229577366229577503-3'-UTR,intron-Distal,intron-Proximal4.0521910.84612K562NOLC1
chr1229643857229644044-5'-UTR,CDS,intron-Distal,intron-Proximal3.312796.27275HepG2DDX3X
chr1229643954229643961-CDS,intron-Distal,intron-Proximal3.690469.54328K562YBX3
chr1229625700229625810-CDS,intron-Distal,intron-Proximal4.940314.77152K562IGF2BP1
chr1229600553229600626-CDS,intron-Distal,intron-Proximal3.853937.64838K562BUD13
chr1229643796229643878-CDS,intron-Distal,intron-Proximal3.891223.86479HepG2PRPF8
chr1229625728229625849-CDS,intron-Distal3.191536.80151HepG2BCLAF1
chr1229596410229596445-CDS,intron-Distal3.227089.83233K562YBX3
chr1229599369229599427-CDS,intron-Distal,intron-Proximal3.725066.84849K562U2AF2
chr1229599380229599423-CDS,intron-Distal4.514805.17144K562U2AF1
chr1229600548229600611-CDS,intron-Distal3.632623.05298K562GRWD1
chr1229636544229636611-CDS,intron-Distal,intron-Proximal3.423058.47737K562YBX3
chr1229636476229636509-CDS,intron-Distal,intron-Proximal5.5686816.94745K562AQR
chr1229635529229635570-CDS,intron-Distal,intron-Proximal4.073673.20743HepG2PPIG
chr1229635511229635549-CDS,intron-Distal6.0463722.84879K562AQR
chr1229593921229593931-CDS,intron-Distal4.041143.53690K562ZNF622
chr1229602429229602455-CDS,intron-Distal3.398433.90826K562ZNF622
chr1229643961229643986-CDS,intron-Distal,intron-Proximal3.258594.47973K562YBX3
chr1229601231229601285-CDS,intron-Distal,intron-Proximal5.1511919.61217K562SF3B4
chr1229588222229588274-CDS,intron-Distal,intron-Proximal4.984568.52787K562AQR
chr1229600584229600633-CDS,intron-Distal,intron-Proximal3.500647.98670K562SF3B4
chr1229635502229635590-CDS,intron-Distal,intron-Proximal4.253765.90528HepG2AQR
chr1229586321229586362-CDS,intron-Distal,intron-Proximal4.473015.52476K562BUD13
chr1229633929229633982-CDS,intron-Distal4.3641820.78725K562YBX3
chr1229635524229635604-CDS,intron-Distal,intron-Proximal3.423116.94390K562SF3B4
chr1229586320229586388-CDS,intron-Distal,intron-Proximal5.628629.95272K562AQR
chr1229643920229643929-CDS,intron-Distal3.226636.13091K562YBX3
chr1229606472229606542-CDS,intron-Distal3.884183.11149HepG2G3BP1
chr1229643929229643949-CDS,intron-Distal,intron-Proximal3.719819.88356K562YBX3
chr1229635549229635587-CDS,intron-Distal,intron-Proximal5.6884025.49678K562AQR
chr1229635520229635604-CDS,intron-Distal,intron-Proximal3.7326212.83194K562BUD13
chr1229643949229643954-CDS,intron-Distal,intron-Proximal4.171529.87532K562YBX3
chr1229606409229606523-CDS,intron-Distal3.221073.63681K562RBM15
chr1229625813229625850-CDS,intron-Distal,intron-Proximal4.717785.82303K562BUD13
chr1229601285229601312-intron-Distal,intron-Proximal6.0218413.26581K562SF3B4
chr1229642790229642871-intron-Distal4.187793.80512K562CSTF2T
chr1229636437229636480-intron-Distal,intron-Proximal3.233434.63145K562BUD13
chr1229619710229619773-intron-Distal,intron-Proximal4.334664.53454K562PRPF8
chr1229601067229601163-intron-Distal,intron-Proximal5.708598.88118K562AQR
chr1229601055229601130-intron-Distal,intron-Proximal3.128873.46531K562KHSRP
chr1229643770229643814-intron-Distal,intron-Proximal3.901115.35619K562AQR
chr1229615701229615796-intron-Distal4.019575.16181K562PTBP1
chr1229634427229634510-intron-Distal4.852497.45692HepG2UPF1
chr1229584833229584873-intron-Distal,intron-Proximal4.549854.48002K562AQR
chr1229602162229602233-intron-Distal3.360353.90146K562KHSRP
chr1229633629229633731-intron-Distal4.8945210.12394K562QKI
chr1229588161229588209-intron-Distal,intron-Proximal4.384434.21433K562PRPF8
chr1229632675229632749-intron-Distal4.540374.80665HepG2QKI
chr1229591480229591582-intron-Distal3.170303.93901K562KHSRP
chr1229636415229636475-intron-Distal,intron-Proximal4.453186.71940K562PRPF8
chr1229601590229601644-intron-Distal3.148475.62468K562BUD13
chr1229636421229636476-intron-Distal,intron-Proximal6.7460118.07825K562AQR
chr1229600633229600679-intron-Distal,intron-Proximal6.1393110.98510K562SF3B4
chr1229602328229602379-intron-Distal,intron-Proximal4.126135.26367K562AQR
chr1229636295229636378-intron-Distal3.182234.07440K562PRPF8
chr1229601413229601470-intron-Distal3.898443.45860K562TIA1
chr1229588196229588218-intron-Distal,intron-Proximal4.708594.13847K562AQR
chr1229593852229593905-intron-Distal,intron-Proximal4.458624.58968K562PRPF8
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for NUP133 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for NUP133 is not available on ENCORE database.

  • 93 RBPs can affect the levels of NUP133.  








The Knockdown/knockout RNA-Seq assay for NUP133 is not available on ENCORE database.





93 RBPs can affect the gene expression of NUP133 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
NUP133ENSG00000069248.92198.981801745.357600.333202.025401.56250HepG2AKAP1
NUP133ENSG00000069248.9834.500201099.50530-0.397902.267601.42330HepG2BCCIP
NUP133ENSG00000069248.9597.62300955.39360-0.676905.826304.57440HepG2BCLAF1
NUP133ENSG00000069248.9898.554701160.87730-0.369502.872202.26260HepG2BOP1
NUP133ENSG00000069248.9944.177601190.25570-0.334104.367903.56870HepG2CKAP4
NUP133ENSG00000069248.9660.427201065.73150-0.690407.716506.61530HepG2CPSF6
NUP133ENSG00000069248.91109.731801545.42770-0.477807.238706.29170HepG2CELF1
NUP133ENSG00000069248.91307.307601661.68810-0.346105.466204.47200HepG2DAZAP1
NUP133ENSG00000069248.9699.720201081.03710-0.627604.933703.93710HepG2DDX55
NUP133ENSG00000069248.9643.28860989.98160-0.6219011.7306010.48850HepG2DNAJC2
NUP133ENSG00000069248.9806.014601380.61000-0.776408.955807.92800HepG2EIF2S1
NUP133ENSG00000069248.91153.286001525.66380-0.403702.720702.08680HepG2EIF4A3
NUP133ENSG00000069248.91223.289601570.41690-0.360402.862802.03500HepG2EIF4G2
NUP133ENSG00000069248.9668.201801067.59380-0.676002.569601.59390HepG2FTO
NUP133ENSG00000069248.91065.797801428.04320-0.422103.027302.33260HepG2G3BP1
NUP133ENSG00000069248.91176.161001516.20180-0.366402.695401.81820HepG2G3BP2
NUP133ENSG00000069248.9519.01770688.34660-0.407402.636301.76340HepG2GEMIN5
NUP133ENSG00000069248.9891.865001208.04270-0.437803.053002.38480HepG2GPKOW
NUP133ENSG00000069248.9710.385601008.40530-0.505404.674403.86390HepG2HNRNPA1
NUP133ENSG00000069248.91245.707301527.15150-0.293903.125902.14040HepG2HNRNPA2B1
NUP133ENSG00000069248.9405.201101121.65280-1.4689029.7070027.72790HepG2HNRNPC
NUP133ENSG00000069248.9952.146501136.52400-0.255402.370601.70310HepG2HNRNPF
NUP133ENSG00000069248.91134.740001513.66280-0.415707.280206.23320HepG2HNRNPL
NUP133ENSG00000069248.9761.398301152.86170-0.598505.705504.83530HepG2HNRNPLL
NUP133ENSG00000069248.9932.242301114.23800-0.257302.378101.81310HepG2HNRNPU
NUP133ENSG00000069248.9868.711701119.15110-0.365503.242602.46330HepG2IGF2BP1
NUP133ENSG00000069248.9911.850201451.53360-0.670707.117506.08400HepG2IGF2BP2
NUP133ENSG00000069248.9854.538901138.15920-0.413506.278805.21780HepG2ILF2
NUP133ENSG00000069248.91112.209801460.07160-0.392602.185901.30700HepG2KHSRP
NUP133ENSG00000069248.9813.951501088.27590-0.419006.194804.69550HepG2KIF1C
NUP133ENSG00000069248.91105.124901540.08880-0.478804.031703.24140HepG2MAGOH
NUP133ENSG00000069248.9750.664201072.26240-0.514404.892703.83690HepG2MSI2
NUP133ENSG00000069248.91116.125701585.12360-0.506104.227503.45010HepG2NCBP2
NUP133ENSG00000069248.91162.437801647.72790-0.503307.199305.98060HepG2NOL12
NUP133ENSG00000069248.91092.002601411.52260-0.370302.548401.85260HepG2PABPC4
NUP133ENSG00000069248.9908.779801420.45790-0.6444013.1269011.95920HepG2PCBP1
NUP133ENSG00000069248.9559.81630993.81330-0.8280014.7986013.16980HepG2PPIL4
NUP133ENSG00000069248.9695.120701009.75490-0.538707.765506.55110HepG2PRPF4
NUP133ENSG00000069248.91075.218301445.33650-0.426806.550905.77870HepG2PTBP1
NUP133ENSG00000069248.91220.663001572.90770-0.365803.313402.66980HepG2PUF60
NUP133ENSG00000069248.91225.605801668.49450-0.445105.464404.53750HepG2PUM2
NUP133ENSG00000069248.9816.242801212.60540-0.5710010.491909.42420HepG2PUS1
NUP133ENSG00000069248.9684.718601095.96990-0.678603.713602.90050HepG2RAVER1
NUP133ENSG00000069248.91479.904801749.80290-0.241702.132801.66240HepG2RBM22
NUP133ENSG00000069248.91040.813301420.67890-0.448904.855403.98460HepG2RBM25
NUP133ENSG00000069248.9769.916001224.32460-0.669208.218507.14000HepG2RPLP0
NUP133ENSG00000069248.9661.612401076.50690-0.702304.777503.55100HepG2RPS10
NUP133ENSG00000069248.9485.18200752.28250-0.632706.373105.48160HepG2RPS19
NUP133ENSG00000069248.9872.328101136.89120-0.382202.687501.89810HepG2RPS2
NUP133ENSG00000069248.9731.96790992.28500-0.439005.897805.01170HepG2SAFB2
NUP133ENSG00000069248.9558.23070755.00630-0.435602.759101.82110HepG2SERBP1
NUP133ENSG00000069248.9920.846001141.07820-0.309402.064301.44940HepG2SF3B1
NUP133ENSG00000069248.91127.830801504.84010-0.416106.189105.36400HepG2SF3B4
NUP133ENSG00000069248.91116.640601508.19040-0.433707.618906.54340HepG2SLBP
NUP133ENSG00000069248.9884.624101157.18360-0.387505.706004.83550HepG2SMN1
NUP133ENSG00000069248.9844.927801117.26960-0.403102.180501.34130HepG2SMNDC1
NUP133ENSG00000069248.92272.681801570.703500.5329011.6565010.82920HepG2SRSF1
NUP133ENSG00000069248.91261.458401553.02720-0.300003.516002.82600HepG2SRSF5
NUP133ENSG00000069248.9791.357401116.59950-0.496706.997905.97180HepG2SRSF7
NUP133ENSG00000069248.91390.551801715.92480-0.303304.027203.43350HepG2SSB
NUP133ENSG00000069248.9596.58740884.94440-0.568903.981802.51780HepG2STAU1
NUP133ENSG00000069248.91377.167101766.21120-0.359005.806504.96490HepG2SUCLG1
NUP133ENSG00000069248.9610.70380894.62020-0.550805.513404.21190HepG2SUPT6H
NUP133ENSG00000069248.9571.961301076.16410-0.911909.763708.62120HepG2SUPV3L1
NUP133ENSG00000069248.91742.416401411.743600.303503.189402.59340HepG2TAF15
NUP133ENSG00000069248.9692.050601123.80760-0.699407.983706.83530HepG2TARDBP
NUP133ENSG00000069248.9477.074401082.73390-1.1824025.6504024.41650HepG2TIAL1
NUP133ENSG00000069248.9675.751701092.36610-0.6929013.0475011.95050HepG2TRIM56
NUP133ENSG00000069248.91273.720401536.67780-0.270802.095701.34450HepG2TUFM
NUP133ENSG00000069248.9862.178201133.23220-0.394402.741102.11520HepG2U2AF1
NUP133ENSG00000069248.9896.589601169.34950-0.383205.021104.12330HepG2UPF1
NUP133ENSG00000069248.9975.048701201.91240-0.301803.015201.92700HepG2UTP18
NUP133ENSG00000069248.9946.616601128.95790-0.254102.425201.85660HepG2UTP3
NUP133ENSG00000069248.9720.601901059.36530-0.555904.503703.58670HepG2XRN2
NUP133ENSG00000069248.91076.738101286.05770-0.256303.044602.47810HepG2ZNF622
NUP133ENSG00000069248.92840.215804270.38860-0.588408.728007.78160K562AQR
NUP133ENSG00000069248.92239.988302680.06700-0.258803.617102.51340K562BCLAF1
NUP133ENSG00000069248.93122.327703744.10560-0.262002.486001.38000K562CCDC124
NUP133ENSG00000069248.91719.034802103.59400-0.291302.654601.88550K562CPSF6
NUP133ENSG00000069248.91944.614702396.42940-0.301402.792401.74560K562DDX3X
NUP133ENSG00000069248.92093.327402632.43410-0.330604.939103.30050K562EIF2S1
NUP133ENSG00000069248.92274.851703128.46530-0.459708.748207.57820K562EIF2S2
NUP133ENSG00000069248.91744.505602503.73810-0.521306.452305.20660K562EIF4A3
NUP133ENSG00000069248.91880.046502254.81020-0.262202.643701.52430K562EIF4B
NUP133ENSG00000069248.91639.384602008.42210-0.292902.357601.62300K562GPKOW
NUP133ENSG00000069248.92991.132404169.12370-0.479106.893505.69320K562GRSF1
NUP133ENSG00000069248.91366.503002211.25180-0.6944011.7699010.61270K562HNRNPC
NUP133ENSG00000069248.93180.119103866.98820-0.282102.354901.61670K562HSPD1
NUP133ENSG00000069248.91305.096401714.92250-0.394002.367401.51280K562KRR1
NUP133ENSG00000069248.92495.268903190.38120-0.354503.127602.23300K562MAGOH
NUP133ENSG00000069248.92577.068403237.90130-0.329302.876902.03940K562PPIG
NUP133ENSG00000069248.91380.817301982.65940-0.521905.810804.42560K562PSIP1
NUP133ENSG00000069248.92611.721003099.57850-0.247102.248801.64080K562PTBP1
NUP133ENSG00000069248.97109.979505870.652200.276203.373502.19000K562PUM1
NUP133ENSG00000069248.94888.859005752.21040-0.234602.961801.97110K562PUM2
NUP133ENSG00000069248.92169.951302972.68600-0.454105.140503.95400K562RBM22
NUP133ENSG00000069248.91906.877402391.40260-0.326603.189801.75440K562RBM25
NUP133ENSG00000069248.92104.091203498.51150-0.733503.289301.58010K562RBM39
NUP133ENSG00000069248.92607.658103159.27800-0.276803.685402.75260K562SF3A3
NUP133ENSG00000069248.91740.253302621.61050-0.5912010.585608.85960K562SF3B4
NUP133ENSG00000069248.91394.996801714.97240-0.297902.279301.36920K562SRFBP1
NUP133ENSG00000069248.91392.935701745.08010-0.325202.884101.80370K562SRSF4
NUP133ENSG00000069248.92292.310302869.35430-0.323902.834801.77080K562SRSF5
NUP133ENSG00000069248.91516.824002171.81280-0.517802.926601.87820K562SUPV3L1
NUP133ENSG00000069248.92177.409703075.41360-0.498205.550604.53030K562TARDBP
NUP133ENSG00000069248.92409.650502966.51850-0.299903.083502.21090K562TIA1
NUP133ENSG00000069248.91401.063001906.96310-0.444803.810702.70690K562TIAL1
NUP133ENSG00000069248.91611.386302026.11940-0.330402.696001.76440K562TRIM56
NUP133ENSG00000069248.93187.620703691.32320-0.211702.930101.62270K562TROVE2
NUP133ENSG00000069248.91740.478002443.90400-0.489704.269502.84990K562U2AF1
NUP133ENSG00000069248.92072.966802523.95140-0.284002.894902.07400K562U2AF2
NUP133ENSG00000069248.92771.275503395.03270-0.292905.193304.24310K562UPF1
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for NUP133 is not available on ENCORE database.





7 RBPs can affect the splicing of NUP133 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SENUP133ENSG00000069248.9chr1-229611384229611479229606326229606551229619800229619892-0.103000.000000.00018excludedK562AKAP8L
SENUP133ENSG00000069248.9chr1-229584872229584937229580660229580749229586271229586352-0.099000.000000.00000excludedK562AQR
SENUP133ENSG00000069248.9chr1-229613343229613589229611384229611479229619800229619892-0.057000.002170.02349excludedK562AQR
SENUP133ENSG00000069248.9chr1-229611384229611479229606326229606551229619800229619892-0.157000.000000.00000excludedK562PUS1
SENUP133ENSG00000069248.9chr1-229611384229611479229606326229606551229619800229619892-0.066000.000370.01611excludedK562UTP18
SENUP133ENSG00000069248.9chr1-229611384229611479229606326229606551229619800229619892-0.112000.000000.00004excludedK562AGGF1
SENUP133ENSG00000069248.9chr1-2296014912296016342296011662296012662296023802296025030.362000.000000.00000includedK562HNRNPC
A3SSNUP133ENSG00000069248.9chr1-229601166229601266229601166229601254229602380229602503-0.056000.001290.06243shorterK562SF3B4
A3SSNUP133ENSG00000069248.9chr1-2296023802296026012296023802296025032296063262296065510.079000.000000.00000longerK562AQR

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for NUP133 is not avaliable on ENCORE database.