NTHL1

General Information

Gene Name       : NTHL1
Gene ID             : ENSG00000065057.7
Essential Gene : No

Functions

Localization

Domains (AlphaFold: NTHL1)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878NTHL1ENSG00000065057.70.125.512.81ENCSR000AEF
HepG2NTHL1ENSG00000065057.749.6810.3730.02ENCSR985KAT
K562NTHL1ENSG00000065057.714.587.6711.12ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for NTHL1 is not avaliable on ENCORE database.



Proteins bound to RNA
  • NTHL1 RNA is bound by 4 proteins.  







eCLIP assay for NTHL1 is not avaliable on ENCORE database.





4 proteins are bound to NTHL1 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr1620977092097837-CDS,intron-Distal,intron-Proximal3.326435.06399K562DDX3X
chr1620921432092214-CDS,intron-Distal,intron-Proximal4.382565.15063HepG2CSTF2T
chr1620923982092498-intron-Distal3.519994.35339HepG2CSTF2T
chr1620927042092781-intron-Distal5.180896.62861HepG2FAM120A
chr1620906402090692-intron-Distal5.556587.96764HepG2XPO5
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for NTHL1 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for NTHL1 is not available on ENCORE database.

  • 86 RBPs can affect the levels of NTHL1.  








The Knockdown/knockout RNA-Seq assay for NTHL1 is not available on ENCORE database.





86 RBPs can affect the gene expression of NTHL1 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
NTHL1ENSG00000065057.3281.50150385.03280-0.451803.095602.28930HepG2AKAP8L
NTHL1ENSG00000065057.394.59550168.43340-0.832302.671501.91300HepG2CALR
NTHL1ENSG00000065057.3278.19040383.13910-0.461803.382902.66030HepG2CKAP4
NTHL1ENSG00000065057.3306.43440228.554800.422902.425201.81570HepG2CELF1
NTHL1ENSG00000065057.3323.67960245.718600.397502.463101.75810HepG2DAZAP1
NTHL1ENSG00000065057.3214.53460366.67980-0.773306.644605.68180HepG2DKC1
NTHL1ENSG00000065057.3166.81800107.485700.634002.698602.00120HepG2DNAJC21
NTHL1ENSG00000065057.3164.69320106.510600.628702.943602.27390HepG2DNAJC2
NTHL1ENSG00000065057.399.89010186.88660-0.903704.263803.15830HepG2EIF3D
NTHL1ENSG00000065057.3145.17260443.40230-1.610804.534403.71920HepG2EIF4A3
NTHL1ENSG00000065057.3214.60600316.21240-0.559202.802901.70150HepG2ESF1
NTHL1ENSG00000065057.3402.44150653.20500-0.698809.544308.53750HepG2ETF1
NTHL1ENSG00000065057.3236.80190368.70250-0.638802.867002.08320HepG2FIP1L1
NTHL1ENSG00000065057.3127.79360209.14890-0.710702.359501.76450HepG2GPKOW
NTHL1ENSG00000065057.3268.82610150.848700.833504.291502.55740HepG2HNRNPA0
NTHL1ENSG00000065057.344.68000108.51510-1.280203.566702.84560HepG2HNRNPA1
NTHL1ENSG00000065057.3441.45660223.820500.9798013.1256011.75980HepG2HNRNPL
NTHL1ENSG00000065057.374.47760199.59770-1.422205.474504.62000HepG2HNRNPLL
NTHL1ENSG00000065057.3206.49480119.897100.784204.604403.83890HepG2HNRNPU
NTHL1ENSG00000065057.3242.98060421.93570-0.796201.982901.40220HepG2IGF2BP2
NTHL1ENSG00000065057.3262.18460380.46360-0.537202.334101.57560HepG2LARP4
NTHL1ENSG00000065057.3296.77860159.280400.897705.607004.00520HepG2LARP7
NTHL1ENSG00000065057.3236.01710447.94840-0.924402.349801.74390HepG2MAGOH
NTHL1ENSG00000065057.3199.98660298.22530-0.576503.037902.19070HepG2MSI2
NTHL1ENSG00000065057.3406.67290243.655900.738906.176605.04100HepG2NOL12
NTHL1ENSG00000065057.382.6289034.503901.259803.347701.75750HepG2NOLC1
NTHL1ENSG00000065057.3224.43700410.24630-0.870202.005201.38240HepG2PABPC4
NTHL1ENSG00000065057.3298.04290434.89340-0.545104.343103.61250HepG2PCBP1
NTHL1ENSG00000065057.3170.07610106.940100.669303.040102.27090HepG2PPIL4
NTHL1ENSG00000065057.3113.68620167.83540-0.562002.341901.62360HepG2PRPF4
NTHL1ENSG00000065057.3268.49560442.54250-0.720906.583005.80990HepG2PTBP1
NTHL1ENSG00000065057.3403.70750232.600200.795406.611705.74390HepG2PUF60
NTHL1ENSG00000065057.3438.64820246.926400.828905.968005.16440HepG2PUM1
NTHL1ENSG00000065057.3217.85070390.38660-0.841608.909007.90760HepG2PUS1
NTHL1ENSG00000065057.3277.01820545.95450-0.9788012.3395011.40570HepG2RBM22
NTHL1ENSG00000065057.3286.03280434.95640-0.604704.240903.42060HepG2RBM25
NTHL1ENSG00000065057.3305.77850192.075300.670703.082602.03460HepG2RBM27
NTHL1ENSG00000065057.3347.88480492.48890-0.501503.687903.08060HepG2NELFE
NTHL1ENSG00000065057.3364.17560458.71980-0.333001.899101.37530HepG2RECQL
NTHL1ENSG00000065057.3153.91320225.51080-0.551102.289501.65940HepG2RPLP0
NTHL1ENSG00000065057.3303.71950180.826800.748003.774202.50870HepG2RPS5
NTHL1ENSG00000065057.3291.40270106.778701.448305.385104.53930HepG2SAFB2
NTHL1ENSG00000065057.3103.72560182.49740-0.815103.929902.81060HepG2SERBP1
NTHL1ENSG00000065057.3108.31210197.54250-0.867003.039402.30030HepG2SF3B1
NTHL1ENSG00000065057.3307.47180460.70410-0.583404.629603.89470HepG2SF3B4
NTHL1ENSG00000065057.3389.22450223.049900.803108.445507.32340HepG2SLBP
NTHL1ENSG00000065057.3185.73400124.530600.576602.285501.69180HepG2SMN1
NTHL1ENSG00000065057.3114.32290219.80780-0.943102.754701.97530HepG2SNRNP70
NTHL1ENSG00000065057.3300.65850616.62840-1.0363016.7926015.83170HepG2SRFBP1
NTHL1ENSG00000065057.3151.42920480.89150-1.6671026.7621025.62100HepG2SRSF1
NTHL1ENSG00000065057.3442.08230229.672000.9446011.4417010.28810HepG2SRSF5
NTHL1ENSG00000065057.3198.71400391.24490-0.9774011.0195010.04720HepG2SRSF9
NTHL1ENSG00000065057.3248.81950535.36700-1.1054017.0859016.03800HepG2SSB
NTHL1ENSG00000065057.3244.05500155.861200.646802.393101.38040HepG2STIP1
NTHL1ENSG00000065057.3431.51890261.189100.724207.516306.57260HepG2SUCLG1
NTHL1ENSG00000065057.3166.49530248.81260-0.579603.078602.09160HepG2SUPT6H
NTHL1ENSG00000065057.3175.46940432.28910-1.3008016.3152015.11780HepG2TAF15
NTHL1ENSG00000065057.3280.78180397.16700-0.500303.276202.37110HepG2TIA1
NTHL1ENSG00000065057.3247.29340117.541801.073008.852907.93430HepG2TRIM56
NTHL1ENSG00000065057.3384.42160227.258500.758305.962604.61400HepG2TUFM
NTHL1ENSG00000065057.3166.01820315.29940-0.925405.276104.42490HepG2U2AF1
NTHL1ENSG00000065057.3505.42780240.561401.071008.736007.21660HepG2UBE2L3
NTHL1ENSG00000065057.3278.79410160.412500.797302.763301.66810HepG2XPO5
NTHL1ENSG00000065057.3199.68510274.19640-0.457502.612202.07700HepG2ZNF622
NTHL1ENSG00000065057.3331.28470186.469100.829006.913906.07510K562AGGF1
NTHL1ENSG00000065057.3257.67380164.585400.646604.134702.25670K562AKAP1
NTHL1ENSG00000065057.3298.49070204.912300.542603.077002.02600K562AKAP8
NTHL1ENSG00000065057.3268.93950194.032200.470902.213801.62760K562AKAP8L
NTHL1ENSG00000065057.3183.36220350.07510-0.933006.346505.51910K562AQR
NTHL1ENSG00000065057.3293.22940203.591600.526303.227402.23630K562ATP5C1
NTHL1ENSG00000065057.3256.89230146.238000.812705.249903.91060K562BCLAF1
NTHL1ENSG00000065057.3219.62740110.943300.985105.672904.08190K562CSTF2
NTHL1ENSG00000065057.3191.33100128.202000.577602.700901.39780K562DDX27
NTHL1ENSG00000065057.3253.77400169.065500.585903.319801.85400K562DDX6
NTHL1ENSG00000065057.3312.67810208.775600.582604.021902.93920K562DKC1
NTHL1ENSG00000065057.393.4922048.318300.952202.472001.71910K562EIF3G
NTHL1ENSG00000065057.34.4379034.61240-2.963305.381404.32000K562G3BP2
NTHL1ENSG00000065057.3544.95860375.297100.538003.885502.99470K562GRSF1
NTHL1ENSG00000065057.360.00470163.91360-1.449807.932106.96920K562HNRNPC
NTHL1ENSG00000065057.3173.0975085.310001.020703.228502.08960K562IGF2BP2
NTHL1ENSG00000065057.382.63610158.79700-0.942303.072301.59330K562LARP7
NTHL1ENSG00000065057.3147.2940089.646800.716302.902202.04090K562MAGOH
NTHL1ENSG00000065057.3146.0540089.463300.707002.883101.93980K562MATR3
NTHL1ENSG00000065057.3327.00920495.31820-0.599004.557303.10340K562MSI2
NTHL1ENSG00000065057.374.84390148.30000-0.986603.895802.90910K562PCBP3
NTHL1ENSG00000065057.3264.10890177.556500.572802.784101.96060K562PPIG
NTHL1ENSG00000065057.3374.49520539.42540-0.526504.540803.14800K562PUM1
NTHL1ENSG00000065057.3274.93930187.488000.552203.072202.45290K562RBM15
NTHL1ENSG00000065057.3115.95250206.76970-0.834503.158001.45910K562RPS3A
NTHL1ENSG00000065057.337.6019089.31040-1.248003.583802.47000K562SF3B1
NTHL1ENSG00000065057.3198.16990296.90270-0.583303.734102.66640K562SRPK2
NTHL1ENSG00000065057.3159.5356085.386500.901702.657201.96360K562SRSF1
NTHL1ENSG00000065057.3163.8901080.644101.023005.271103.73590K562SRSF5
NTHL1ENSG00000065057.3152.0031086.414100.814703.405602.61720K562TARDBP
NTHL1ENSG00000065057.3154.5774083.356900.890903.992702.98250K562TIA1
NTHL1ENSG00000065057.312.0861034.61220-1.517902.583401.80580K562U2AF2
NTHL1ENSG00000065057.3389.38420571.76280-0.554202.972401.51450K562UBE2L3
NTHL1ENSG00000065057.3235.01340311.36850-0.405902.150401.51090K562UPF1
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for NTHL1 is not available on ENCORE database.





1 RBPs can affect the splicing of NTHL1 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SENTHL1ENSG00000065057.3chr16-209463020948012093567209372720961282096367-0.148000.000310.06747excludedHepG2DKC1

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for NTHL1 is not avaliable on ENCORE database.