MTM1

General Information

Gene Name       : MTM1
Gene ID             : ENSG00000171100.14
Essential Gene : No

Functions

Localization

Domains (AlphaFold: MTM1)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878MTM1ENSG00000171100.146.805.366.08ENCSR000AEF
HepG2MTM1ENSG00000171100.148.3316.7612.55ENCSR985KAT
K562MTM1ENSG00000171100.147.177.587.38ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for MTM1 is not avaliable on ENCORE database.



Proteins bound to RNA
  • MTM1 RNA is bound by 9 proteins.  







eCLIP assay for MTM1 is not avaliable on ENCORE database.





9 proteins are bound to MTM1 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chrX149787497149787543+5'-UTR,CDS,intron-Distal,intron-Proximal4.020055.09028HepG2U2AF2
chrX149807436149807490+CDS3.228835.69345HepG2BCLAF1
chrX149776173149776217+intron-Distal4.691413.62238HepG2MATR3
chrX149770830149770930+intron-Distal3.392574.18137HepG2SUGP2
chrX149778283149778347+intron-Distal4.818457.14375HepG2SUGP2
chrX149773008149773088+intron-Distal3.158523.31127HepG2MATR3
chrX149744303149744348+intron-Distal3.761063.04224HepG2SUGP2
chrX149776193149776281+intron-Distal3.622295.56133HepG2SUGP2
chrX149775317149775495+intron-Distal7.0158926.66084HepG2DDX59
chrX149781762149781870+intron-Distal3.353693.68839K562KHSRP
chrX149778088149778166+intron-Distal3.985847.29258HepG2SUGP2
chrX149776092149776203+intron-Distal3.820743.33944K562MATR3
chrX149778196149778265+intron-Distal4.542923.62238HepG2MATR3
chrX149770660149770723+intron-Distal3.653055.30446HepG2SUGP2
chrX149797567149797617+intron-Distal4.035273.54208HepG2SUGP2
chrX149777974149778016+intron-Distal4.164734.03915HepG2SUGP2
chrX149773117149773231+intron-Distal4.135773.62025K562MATR3
chrX149770967149771009+intron-Distal3.299464.33009HepG2SUGP2
chrX149772887149772951+intron-Distal3.900987.03506HepG2SUGP2
chrX149772436149772471+intron-Distal4.022844.03915HepG2SUGP2
chrX149797345149797380+intron-Distal3.761063.04224HepG2SUGP2
chrX149773338149773411+intron-Distal4.645064.57427HepG2PCBP2
chrX149775259149775435+intron-Distal3.392035.12480HepG2HNRNPK
chrX149770654149770760+intron-Distal4.674444.31720HepG2MATR3
chrX149771128149771195+intron-Distal4.506985.04879HepG2SUGP2
chrX149797782149797838+intron-Distal3.238153.10640HepG2SUGP2
chrX149767259149767388+intron-Distal5.3328510.31535HepG2QKI
chrX149796891149796958+intron-Distal3.457214.84410HepG2SUGP2
chrX149775232149775389+intron-Distal5.9250524.68026HepG2PCBP2
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for MTM1 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for MTM1 is not available on ENCORE database.

  • 88 RBPs can affect the levels of MTM1.  








The Knockdown/knockout RNA-Seq assay for MTM1 is not available on ENCORE database.





88 RBPs can affect the gene expression of MTM1 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
MTM1ENSG00000171100.10626.50190871.36990-0.476002.837902.29930HepG2AKAP1
MTM1ENSG00000171100.10220.74210557.90110-1.3376013.9504011.74570HepG2BCCIP
MTM1ENSG00000171100.10401.45140785.15470-0.9678012.2120011.07550HepG2BOP1
MTM1ENSG00000171100.10567.11850963.00230-0.763903.400502.30900HepG2CCAR1
MTM1ENSG00000171100.10375.21260500.15230-0.414703.474302.74460HepG2CKAP4
MTM1ENSG00000171100.10321.89760491.39550-0.610302.859302.08140HepG2CNOT7
MTM1ENSG00000171100.10236.90440720.82020-1.6053025.5454023.72060HepG2CPSF6
MTM1ENSG00000171100.10213.81990344.58750-0.688504.360003.04170HepG2CSTF2
MTM1ENSG00000171100.10581.58900753.06070-0.372803.213302.53090HepG2CELF1
MTM1ENSG00000171100.10621.79480809.71530-0.381004.140703.26220HepG2DAZAP1
MTM1ENSG00000171100.10396.23800548.54150-0.469202.462901.72880HepG2DDX55
MTM1ENSG00000171100.10479.32010716.97110-0.580903.861003.14140HepG2DDX6
MTM1ENSG00000171100.10419.58900559.76050-0.415803.195002.44410HepG2DNAJC21
MTM1ENSG00000171100.10304.56360554.85500-0.8654013.0819011.77040HepG2DNAJC2
MTM1ENSG00000171100.10459.30450689.33390-0.585804.221503.49710HepG2EIF2S1
MTM1ENSG00000171100.10344.80160480.10140-0.477602.356501.51580HepG2EIF3D
MTM1ENSG00000171100.10430.12230741.67260-0.786005.459104.51700HepG2EIF4B
MTM1ENSG00000171100.10737.50780967.38970-0.391402.891002.27880HepG2ETF1
MTM1ENSG00000171100.10615.80970451.201800.448603.180902.34150HepG2FUBP3
MTM1ENSG00000171100.10412.15950636.51260-0.627002.954301.80200HepG2FUS
MTM1ENSG00000171100.10240.68930768.52930-1.6749026.8720024.99050HepG2FXR1
MTM1ENSG00000171100.10315.17100712.99460-1.1778013.8204012.39600HepG2G3BP1
MTM1ENSG00000171100.10252.28230454.85710-0.850405.319903.77270HepG2GRSF1
MTM1ENSG00000171100.10396.96860565.12360-0.509503.642502.91570HepG2HNRNPA1
MTM1ENSG00000171100.10492.60310721.80580-0.551204.200503.35550HepG2HNRNPK
MTM1ENSG00000171100.10438.44750737.58560-0.7504012.3248010.99630HepG2HNRNPL
MTM1ENSG00000171100.101065.39550779.791900.450103.445202.75190HepG2HNRNPLL
MTM1ENSG00000171100.10349.90100624.45100-0.8356012.3383011.13400HepG2HNRNPU
MTM1ENSG00000171100.10527.30890724.76870-0.458902.966402.27120HepG2IGF2BP2
MTM1ENSG00000171100.10420.87970680.06240-0.692302.538501.59970HepG2IGF2BP3
MTM1ENSG00000171100.10720.595901016.14060-0.495802.020201.31860HepG2LARP4
MTM1ENSG00000171100.10287.13970515.52850-0.844307.551505.62250HepG2LIN28B
MTM1ENSG00000171100.10527.09150773.12180-0.552603.638502.92400HepG2MATR3
MTM1ENSG00000171100.10444.22010802.91250-0.8540012.7171011.13840HepG2NOL12
MTM1ENSG00000171100.10689.57960449.081700.618602.981502.05880HepG2PABPC1
MTM1ENSG00000171100.10319.08220618.08410-0.9539014.5287012.84720HepG2PARN
MTM1ENSG00000171100.10402.00400556.95830-0.470403.990503.12130HepG2PPIL4
MTM1ENSG00000171100.10277.37820423.10900-0.609203.592702.68530HepG2PRPF8
MTM1ENSG00000171100.10535.04670766.45300-0.518504.453603.71800HepG2PUF60
MTM1ENSG00000171100.10650.52430813.62690-0.322803.370802.73030HepG2PUM1
MTM1ENSG00000171100.10669.00690813.03060-0.281301.861001.30540HepG2PUM2
MTM1ENSG00000171100.10705.86020509.587000.470005.185104.38990HepG2PUS1
MTM1ENSG00000171100.10955.40290581.649100.715903.999503.15780HepG2RAVER1
MTM1ENSG00000171100.10427.40540808.57420-0.9198012.3974011.46150HepG2RBM22
MTM1ENSG00000171100.10778.47400607.763700.357002.539401.89070HepG2RBM25
MTM1ENSG00000171100.10342.91170592.00410-0.787806.670805.12420HepG2RBM27
MTM1ENSG00000171100.10450.66400688.14310-0.610706.745205.96470HepG2NELFE
MTM1ENSG00000171100.10515.81890640.92280-0.313302.234001.67330HepG2RECQL
MTM1ENSG00000171100.10490.30710679.58060-0.471001.916201.33580HepG2RPLP0
MTM1ENSG00000171100.10271.59370467.13490-0.782406.838405.92050HepG2RPS19
MTM1ENSG00000171100.10414.72460545.99200-0.396702.120301.41470HepG2RPS2
MTM1ENSG00000171100.101029.19300771.848500.415002.865902.14760HepG2SF3B1
MTM1ENSG00000171100.10416.90290648.48720-0.637408.699807.66040HepG2SMN1
MTM1ENSG00000171100.10648.22640913.28200-0.494604.842304.23230HepG2SRFBP1
MTM1ENSG00000171100.10552.74790830.48740-0.587303.946502.72900HepG2SRSF3
MTM1ENSG00000171100.10408.93900756.76450-0.8880014.6816013.40170HepG2SRSF5
MTM1ENSG00000171100.10546.10400860.64640-0.6562010.331709.25860HepG2SUCLG1
MTM1ENSG00000171100.10830.83550603.986300.459904.724004.02300HepG2TAF15
MTM1ENSG00000171100.10526.40810760.01660-0.529804.151203.28550HepG2TARDBP
MTM1ENSG00000171100.10402.73870606.72430-0.591205.630004.96620HepG2TIAL1
MTM1ENSG00000171100.10434.20960612.19800-0.495604.993904.28110HepG2TRIM56
MTM1ENSG00000171100.10176.62940322.56000-0.868806.058004.92620HepG2UCHL5
MTM1ENSG00000171100.10167.08530499.98020-1.5813014.6602012.31440HepG2UPF2
MTM1ENSG00000171100.10300.94850537.52790-0.836806.851405.72530HepG2XRN2
MTM1ENSG00000171100.10311.85310411.49060-0.400002.505701.96080K562AGGF1
MTM1ENSG00000171100.10321.66750428.16830-0.412602.302301.70520K562AKAP8L
MTM1ENSG00000171100.10203.22010390.59200-0.942606.574705.73260K562AQR
MTM1ENSG00000171100.10180.38250264.98080-0.554802.758201.44960K562BCCIP
MTM1ENSG00000171100.10196.93800337.83420-0.778604.862903.69290K562BOP1
MTM1ENSG00000171100.10289.73090505.74050-0.803704.273302.90810K562CNOT7
MTM1ENSG00000171100.10332.48980461.33030-0.472502.641901.56170K562CPEB4
MTM1ENSG00000171100.10209.93130359.22200-0.775005.918604.77600K562CPSF6
MTM1ENSG00000171100.10346.76270477.20920-0.460702.352501.74430K562DDX47
MTM1ENSG00000171100.10141.26820219.56440-0.636202.712801.80890K562EFTUD2
MTM1ENSG00000171100.10365.48670263.902000.469701.959801.33610K562EIF2S2
MTM1ENSG00000171100.10180.62200267.63000-0.567303.114502.27190K562EIF3G
MTM1ENSG00000171100.10179.90980249.23380-0.470202.131901.40740K562EIF4A3
MTM1ENSG00000171100.10152.63030259.19130-0.764004.955604.17960K562FXR1
MTM1ENSG00000171100.10384.70140271.200400.504302.313201.67450K562G3BP2
MTM1ENSG00000171100.10202.51100290.86940-0.522402.926601.75330K562GLRX3
MTM1ENSG00000171100.10256.85880342.97440-0.417102.017801.33660K562GPKOW
MTM1ENSG00000171100.10231.29050351.73280-0.604802.579701.84800K562GRSF1
MTM1ENSG00000171100.10203.90420311.36590-0.610703.867702.59980K562HNRNPA1
MTM1ENSG00000171100.10165.42780269.24210-0.702703.751503.06900K562HNRNPC
MTM1ENSG00000171100.10159.92830240.40950-0.588102.715101.58480K562HNRNPF
MTM1ENSG00000171100.10187.16530344.79940-0.881407.805706.31180K562HNRNPU
MTM1ENSG00000171100.10235.29140354.55940-0.591602.343301.42110K562IGF2BP2
MTM1ENSG00000171100.10164.72420273.02170-0.729003.940402.12560K562LIN28B
MTM1ENSG00000171100.10262.87280372.78750-0.504003.093302.20310K562MAGOH
MTM1ENSG00000171100.10231.39590372.05550-0.685205.200103.88470K562MATR3
MTM1ENSG00000171100.10226.66720334.77880-0.562603.119102.18640K562METAP2
MTM1ENSG00000171100.10172.29400305.81420-0.827806.704605.49560K562MTPAP
MTM1ENSG00000171100.10264.31410339.77090-0.362301.971001.32800K562NSUN2
MTM1ENSG00000171100.10249.35160353.11540-0.502002.738801.92170K562PPIG
MTM1ENSG00000171100.10233.90580362.17450-0.630804.604503.76900K562PTBP1
MTM1ENSG00000171100.10866.57520643.982700.428204.213602.87770K562PUM1
MTM1ENSG00000171100.10254.04440424.67070-0.741305.132204.42090K562PUS1
MTM1ENSG00000171100.10259.11450347.36920-0.422902.160801.42290K562RBM22
MTM1ENSG00000171100.10218.90980363.59280-0.732002.414101.32240K562SF1
MTM1ENSG00000171100.10182.05890282.03610-0.631503.901502.88100K562SF3B4
MTM1ENSG00000171100.10232.06490355.03390-0.613403.842403.01560K562SRSF1
MTM1ENSG00000171100.10135.15100206.90560-0.614402.297901.37600K562SUPV3L1
MTM1ENSG00000171100.10221.55860359.35600-0.697704.640103.71750K562TARDBP
MTM1ENSG00000171100.10145.05100218.96620-0.594102.363901.43070K562UCHL5
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for MTM1 is not available on ENCORE database.





5 RBPs can affect the splicing of MTM1 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SEMTM1ENSG00000171100.10chrX+149783061149783172149764961149765034149787510149787612-0.297000.007880.08770excludedK562PUS1
A3SSMTM1ENSG00000171100.10chrX+1497670331497671501497670551497671501497649611497650340.177000.019660.09396longerK562AQR
A3SSMTM1ENSG00000171100.10chrX+1497874781497876121497875101497876121497830611497831720.080000.004790.02782longerK562AQR
A5SSMTM1ENSG00000171100.10chrX+1497830611497832081497830611497831721497875101497876120.135000.001300.02339longerK562AQR
MXEMTM1ENSG00000171100.10chrX+1497670331497671501497830611497831721497649611497650341497875101497876120.250000.001570.013481includedK562AQR
MXEMTM1ENSG00000171100.10chrX+1497670551497671501497830611497831721497649611497650341497875101497876120.214000.001230.009611includedHepG2U2AF2
MXEMTM1ENSG00000171100.10chrX+149767055149767150149783061149783172149764961149765034149787510149787612-0.167000.003760.084112includedHepG2RBFOX2
MXEMTM1ENSG00000171100.10chrX+1497670551497671501497830611497831721497649611497650341497875101497876120.419000.000150.007111includedK562FXR2

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for MTM1 is not avaliable on ENCORE database.