MRPL48

General Information

Gene Name       : MRPL48
Gene ID             : ENSG00000175581.13
Essential Gene : Yes

Functions

Localization

Domains (AlphaFold: MRPL48)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878MRPL48ENSG00000175581.1329.7631.7530.76ENCSR000AEF
HepG2MRPL48ENSG00000175581.1337.1139.5038.30ENCSR985KAT
K562MRPL48ENSG00000175581.1354.1646.0550.10ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for MRPL48 is not avaliable on ENCORE database.



Proteins bound to RNA
  • MRPL48 RNA is bound by 7 proteins.  







eCLIP assay for MRPL48 is not avaliable on ENCORE database.





7 proteins are bound to MRPL48 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr117355427873554324+3'-UTR,5'-UTR,intron-Distal,intron-Proximal4.030618.48964K562SF3B4
chr117357555373575627+3'-UTR3.467563.68829K562YBX3
chr117357095173571044+3'-UTR,CDS,intron-Distal,intron-Proximal3.150067.37965K562YBX3
chr117357556273575622+3'-UTR4.545527.90397K562PABPC4
chr117355597173556021+3'-UTR,CDS,intron-Distal4.692367.57924K562YBX3
chr117355427973554353+3'-UTR,5'-UTR,intron-Distal,intron-Proximal4.904498.54183K562U2AF2
chr117349893773499039+5'-UTR,CDS,intron-Proximal5.0238613.04528K562DDX3X
chr117349911573499184+intron-Distal,intron-Proximal3.378393.88924K562PRPF8
chr117349912573499149+intron-Distal,intron-Proximal4.738117.21143HepG2EFTUD2
chr117349910173499125+intron-Proximal5.349315.16714HepG2EFTUD2
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for MRPL48 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for MRPL48 is not available on ENCORE database.

  • 78 RBPs can affect the levels of MRPL48.  








The Knockdown/knockout RNA-Seq assay for MRPL48 is not available on ENCORE database.





78 RBPs can affect the gene expression of MRPL48 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
MRPL48ENSG00000175581.9330.88560447.01690-0.434003.072502.35470HepG2AUH
MRPL48ENSG00000175581.9169.31980281.68340-0.734304.138303.42290HepG2BOP1
MRPL48ENSG00000175581.9314.74760442.82710-0.492503.466902.76430HepG2CELF1
MRPL48ENSG00000175581.9271.76030418.48830-0.622903.610102.90610HepG2DDX3X
MRPL48ENSG00000175581.9177.60500272.47930-0.617502.230901.52990HepG2DDX55
MRPL48ENSG00000175581.9173.73850293.66180-0.757202.981101.96830HepG2DDX59
MRPL48ENSG00000175581.9228.77080359.47150-0.652003.386902.71080HepG2DDX6
MRPL48ENSG00000175581.9171.01350232.48180-0.443002.208501.61290HepG2DNAJC2
MRPL48ENSG00000175581.9224.18120345.58710-0.624403.316902.67220HepG2EIF2S1
MRPL48ENSG00000175581.9394.95520513.20080-0.377802.302901.74570HepG2ETF1
MRPL48ENSG00000175581.9209.29640293.15210-0.486101.947101.40400HepG2GPKOW
MRPL48ENSG00000175581.9159.14250263.39690-0.726903.718802.92480HepG2HNRNPC
MRPL48ENSG00000175581.9237.34260323.88990-0.448502.787102.06780HepG2HNRNPF
MRPL48ENSG00000175581.9179.22440279.75990-0.642403.069002.41040HepG2HNRNPLL
MRPL48ENSG00000175581.9260.38810363.34800-0.480702.395401.76200HepG2IGF2BP2
MRPL48ENSG00000175581.9209.72650387.61380-0.886105.731504.84950HepG2MATR3
MRPL48ENSG00000175581.9151.71450245.46080-0.694103.673102.74350HepG2MSI2
MRPL48ENSG00000175581.9206.41150396.74780-0.942706.869205.89120HepG2NCBP2
MRPL48ENSG00000175581.9357.08760472.09570-0.402802.497601.77550HepG2NOL12
MRPL48ENSG00000175581.9281.07920380.23380-0.435902.876902.26110HepG2PCBP1
MRPL48ENSG00000175581.9364.73900263.446100.469303.102902.28970HepG2PRPF4
MRPL48ENSG00000175581.9145.50680386.89420-1.4109017.2422016.10040HepG2PTBP1
MRPL48ENSG00000175581.9323.31340450.67190-0.479102.829302.22690HepG2PUF60
MRPL48ENSG00000175581.9333.88280478.42590-0.519004.714103.98280HepG2PUM1
MRPL48ENSG00000175581.9314.10240478.06540-0.606004.622203.76590HepG2PUM2
MRPL48ENSG00000175581.9138.11910263.90880-0.934107.629206.68990HepG2PUS1
MRPL48ENSG00000175581.9280.03410419.03290-0.581504.201203.45450HepG2QKI
MRPL48ENSG00000175581.9258.41600430.58270-0.736606.631905.85540HepG2NELFE
MRPL48ENSG00000175581.9280.61470401.01720-0.515103.639102.94490HepG2RECQL
MRPL48ENSG00000175581.9143.87170290.23810-1.012506.777505.56000HepG2RPS2
MRPL48ENSG00000175581.9130.10520208.00280-0.676902.313701.58760HepG2RRP9
MRPL48ENSG00000175581.9165.53830233.01590-0.493302.463001.84910HepG2SAFB2
MRPL48ENSG00000175581.9396.04580281.694600.491402.325001.70670HepG2SF3A3
MRPL48ENSG00000175581.9179.23990276.91040-0.627503.118702.37130HepG2SF3B1
MRPL48ENSG00000175581.9247.66750402.82100-0.701705.897205.08910HepG2SF3B4
MRPL48ENSG00000175581.9181.96650308.11020-0.759803.274602.42120HepG2SNRNP70
MRPL48ENSG00000175581.9293.00670444.99420-0.602905.036604.23180HepG2SRSF5
MRPL48ENSG00000175581.9377.20860506.06270-0.424003.166302.50970HepG2SUCLG1
MRPL48ENSG00000175581.9288.35130377.90260-0.390202.156701.65040HepG2TAF15
MRPL48ENSG00000175581.9161.89420272.66420-0.752104.045403.18860HepG2TARDBP
MRPL48ENSG00000175581.9110.20020181.83450-0.722502.960101.93050HepG2TFIP11
MRPL48ENSG00000175581.9132.32210466.08710-1.8165017.7260015.59800HepG2UBE2L3
MRPL48ENSG00000175581.9333.89230259.985600.360901.979101.39650HepG2ZC3H8
MRPL48ENSG00000175581.9484.29800671.54700-0.471603.533902.18380K562AARS
MRPL48ENSG00000175581.91833.851801271.270500.5285010.355309.34800K562AGGF1
MRPL48ENSG00000175581.91817.319001396.925500.379503.593402.43730K562AKAP8
MRPL48ENSG00000175581.91636.267101322.812500.306702.439501.82570K562AKAP8L
MRPL48ENSG00000175581.91949.364401314.648700.568206.590705.74820K562AQR
MRPL48ENSG00000175581.91769.138801387.944700.350004.263603.10360K562ATP5C1
MRPL48ENSG00000175581.91012.11350791.678100.354302.887402.08770K562CPSF6
MRPL48ENSG00000175581.92505.712401944.456700.365804.666003.38800K562CELF1
MRPL48ENSG00000175581.91784.039601423.454300.325703.950002.87900K562DKC1
MRPL48ENSG00000175581.91225.24120966.303900.342403.643602.83820K562EIF2S2
MRPL48ENSG00000175581.9512.56050740.61410-0.531003.369502.22060K562EIF3D
MRPL48ENSG00000175581.91290.40070788.618000.710309.242307.59400K562FIP1L1
MRPL48ENSG00000175581.9651.65420781.34360-0.261901.874301.35720K562FXR1
MRPL48ENSG00000175581.91039.94960742.632100.485704.720402.79910K562G3BP1
MRPL48ENSG00000175581.92014.776801287.676000.645809.578408.14670K562GRSF1
MRPL48ENSG00000175581.9557.69130734.63920-0.397602.837302.23370K562HNRNPC
MRPL48ENSG00000175581.91087.71620775.831800.487403.894002.39710K562HNRNPK
MRPL48ENSG00000175581.9932.25630648.717100.523003.943402.81800K562HNRNPM
MRPL48ENSG00000175581.92208.049101069.103901.0463020.7292018.71150K562HSPD1
MRPL48ENSG00000175581.91994.436901403.842100.506506.524005.13400K562KIF1C
MRPL48ENSG00000175581.91820.551301343.816300.437904.397802.95110K562MAK16
MRPL48ENSG00000175581.9996.67380769.156200.373704.048703.08510K562MTPAP
MRPL48ENSG00000175581.91682.763701102.317800.610204.874303.59460K562NAA15
MRPL48ENSG00000175581.91016.12340854.645800.249602.457501.74970K562NSUN2
MRPL48ENSG00000175581.91610.673901106.927300.541002.255401.37920K562PABPN1
MRPL48ENSG00000175581.9712.358601082.93480-0.604305.367804.20470K562PCBP3
MRPL48ENSG00000175581.9487.79500830.62450-0.7679010.117008.62860K562POLR2G
MRPL48ENSG00000175581.91522.52280895.334900.7659010.569208.67070K562PPIG
MRPL48ENSG00000175581.9899.99940673.046700.419103.019102.23570K562PRPF8
MRPL48ENSG00000175581.91819.203601311.882300.471604.485703.81770K562PUS1
MRPL48ENSG00000175581.91623.437401278.219000.344803.855003.17150K562RBM15
MRPL48ENSG00000175581.91055.44080798.860200.401703.476901.96730K562RBM25
MRPL48ENSG00000175581.9694.43940942.64970-0.440902.984301.94130K562RPS3
MRPL48ENSG00000175581.9625.05340863.92350-0.466905.989504.67780K562SRPK2
MRPL48ENSG00000175581.9631.03170909.92440-0.528005.012303.52190K562SRSF4
MRPL48ENSG00000175581.91244.00560946.227500.394602.896101.61250K562STAU1
MRPL48ENSG00000175581.91194.06460843.130200.502006.034804.85350K562U2AF2
MRPL48ENSG00000175581.9686.26040906.19550-0.401104.622703.71950K562UPF1
MRPL48ENSG00000175581.91816.871401480.989800.294802.334101.55310K562ZC3H8
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for MRPL48 is not available on ENCORE database.





32 RBPs can affect the splicing of MRPL48 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SEMRPL48ENSG00000175581.9chr11+735288677352899273519357735193957353675273536841-0.093000.000080.02186excludedK562FTO
SEMRPL48ENSG00000175581.9chr11+735367527353684173498974734990377355585173556021-0.115000.000000.00003excludedK562SF3B4
SEMRPL48ENSG00000175581.9chr11+735742167357430673570951735710547357534073576178-0.117000.000000.00002excludedK562SF3B4
SEMRPL48ENSG00000175581.9chr11+735160717351612473498360734990377353675273536841-0.142000.002880.08088excludedK562PRPF8
SEMRPL48ENSG00000175581.9chr11+735160717351612473498916734990377353675273536841-0.124000.000020.00943excludedK562WDR3
SEMRPL48ENSG00000175581.9chr11+735160717351612473498916734990377353675273536841-0.151000.006600.09405excludedHepG2U2AF1
SEMRPL48ENSG00000175581.9chr11+735160717351612473498916734990377353675273536813-0.226000.000000.00000excludedK562AKAP8L
SEMRPL48ENSG00000175581.9chr11+735160717351612473498916734990377353675273536841-0.118000.000010.01556excludedK562UTP3
SEMRPL48ENSG00000175581.9chr11+735160717351612473498916734990377353675273536841-0.097000.000280.06918excludedK562WDR43
SEMRPL48ENSG00000175581.9chr11+735367527353684173498974734990377355585173556021-0.148000.000000.00000excludedK562AQR
SEMRPL48ENSG00000175581.9chr11+735160717351612473498921734990377353675273536841-0.272000.000000.00000excludedK562PUS1
SEMRPL48ENSG00000175581.9chr11+735160717351612473498916734990377353675273536841-0.101000.000160.03844excludedK562MTPAP
SEMRPL48ENSG00000175581.9chr11+735160717351612473498916734990377353675273536813-0.159000.000000.00013excludedK562NSUN2
SEMRPL48ENSG00000175581.9chr11+735558517355602173536752735368417357421673574306-0.069000.001550.07081excludedK562EFTUD2
SEMRPL48ENSG00000175581.9chr11+7353405773534115735193577351939573536752735368410.074000.001020.06641includedHepG2HNRNPL
SEMRPL48ENSG00000175581.9chr11+735160717351612473498916734990377353675273536841-0.093000.000730.05060excludedK562HNRNPL
SEMRPL48ENSG00000175581.9chr11+735193577351939573516071735161247353675273536841-0.101000.001330.03802excludedHepG2SF3A3
SEMRPL48ENSG00000175581.9chr11+735288677352899273519357735193957353675273536841-0.130000.000950.09086excludedHepG2SSB
SEMRPL48ENSG00000175581.9chr11+735288677352899273519357735193957353675273536841-0.110000.001030.06681excludedHepG2IGF2BP3
SEMRPL48ENSG00000175581.9chr11+735193577351939573516071735161247353675273536841-0.149000.002670.09627excludedHepG2SF3B4
SEMRPL48ENSG00000175581.9chr11+735160717351612473498916734990377353675273536841-0.189000.000010.00362excludedK562RBM22
SEMRPL48ENSG00000175581.9chr11+735160717351612473498921734990377353675273536841-0.148000.000000.00001excludedK562UTP18
SEMRPL48ENSG00000175581.9chr11+735160717351612473498916734990377353675273536841-0.122000.001830.05960excludedK562TARDBP
SEMRPL48ENSG00000175581.9chr11+735288677352899273519357735193957353675273536841-0.054000.000840.03312excludedK562HNRNPU
SEMRPL48ENSG00000175581.9chr11+735160717351612473498916734990377353675273536841-0.240000.000000.00000excludedK562RBM15
SEMRPL48ENSG00000175581.9chr11+735160717351612473498916734990377353675273536841-0.191000.000000.00000excludedK562AGGF1
SEMRPL48ENSG00000175581.9chr11+735160717351612473498921734990377353675273536841-0.197000.000000.00000excludedK562SF3B1
SEMRPL48ENSG00000175581.9chr11+7352886773528992735193577351939573536752735368410.238000.000460.02111includedHepG2HNRNPC
SEMRPL48ENSG00000175581.9chr11+7355429173554412735367527353684173555851735559790.137000.000000.00000includedK562HNRNPC
SEMRPL48ENSG00000175581.9chr11+7352886773528992735193577351939573536752735368130.468000.000000.00000includedK562HNRNPC
SEMRPL48ENSG00000175581.9chr11+735193577351939573516071735161247353675273536841-0.108000.000010.00024excludedK562HNRNPC
MXEMRPL48ENSG00000175581.9chr11+7355585173556021735709517357105473536752735368417357421673574306-0.073000.001820.027632includedK562DROSHA
MXEMRPL48ENSG00000175581.9chr11+7351935773519395735367527353684173516071735161247355585173556021-0.082000.002480.089122includedK562SF3B1
MXEMRPL48ENSG00000175581.9chr11+73516071735161247351935773519395734983607349903773536752735368410.121000.001640.053961includedK562LIN28B
MXEMRPL48ENSG00000175581.9chr11+7351935773519395735367527353684173516071735161247355585173556021-0.099000.000920.094072includedK562UTP3
MXEMRPL48ENSG00000175581.9chr11+73536727735368417357095173571054734989397349903773574216735743060.068000.000000.000061includedK562AQR
MXEMRPL48ENSG00000175581.9chr11+73516042735161247351935773519395734989397349903773536752735368410.120000.000040.000481includedK562AQR
MXEMRPL48ENSG00000175581.9chr11+73555851735560217357095173571054734989507349903773574216735743060.155000.000000.000001includedK562AQR
MXEMRPL48ENSG00000175581.9chr11+73555851735560217357421673574306734989507349903773575340735756500.103000.000000.000001includedK562AQR
MXEMRPL48ENSG00000175581.9chr11+73516013735161247351935773519395734989397349903773536752735368410.109000.000070.000881includedK562AQR
MXEMRPL48ENSG00000175581.9chr11+7353675273536841735709517357105473519357735193957357421673574306-0.111000.004050.030092includedK562AQR
MXEMRPL48ENSG00000175581.9chr11+7353675273536841735558517355602173519357735193957357421673574306-0.112000.000240.002612includedK562AQR
MXEMRPL48ENSG00000175581.9chr11+7352886773528992735340577353411573519357735193957353675273536841-0.311000.006710.045832includedK562AQR
MXEMRPL48ENSG00000175581.9chr11+7355585173556021735741187357430673536727735368417357534073575652-0.090000.014300.084272includedK562AQR
MXEMRPL48ENSG00000175581.9chr11+7355585173556021735741947357430673536727735368417357534073575652-0.090000.014300.084272includedK562AQR
MXEMRPL48ENSG00000175581.9chr11+73516071735161247351935773519395735003797350053573536752735368410.206000.009310.051011includedHepG2U2AF2
MXEMRPL48ENSG00000175581.9chr11+7353675273536841735558517355602173519357735193957357421673574306-0.219000.001510.050772includedHepG2SF3B4
MXEMRPL48ENSG00000175581.9chr11+73519357735193957353675273536841735160717351612473555851735560210.234000.000010.001081includedHepG2TBRG4
MXEMRPL48ENSG00000175581.9chr11+73519357735193957353675273536841735160717351612473555851735560210.118000.001900.077881includedK562PHF6
MXEMRPL48ENSG00000175581.9chr11+73519357735193957353675273536841735160717351612473555851735560210.147000.000020.002251includedK562SAFB
MXEMRPL48ENSG00000175581.9chr11+7351935773519395735367527353684173516071735161247355585173556021-0.222000.000840.031292includedHepG2HNRNPC
MXEMRPL48ENSG00000175581.9chr11+7351935773519395735288677352899273516071735161247353675273536841-0.136000.000500.020902includedHepG2HNRNPC
MXEMRPL48ENSG00000175581.9chr11+73528867735289927353405773534115735193577351939573536752735368410.294000.001600.029331includedK562HNRNPC
MXEMRPL48ENSG00000175581.9chr11+73516071735161247351935773519395734983607349903773536752735368410.201000.000000.000051includedK562HNRNPC
MXEMRPL48ENSG00000175581.9chr11+7353675273536841735558517355602173519357735193957357421673574306-0.165000.000020.001072includedK562HNRNPC
MXEMRPL48ENSG00000175581.9chr11+73555851735560217357095173571054734989507349903773574216735743060.191000.000010.000371includedK562SF3B4
MXEMRPL48ENSG00000175581.9chr11+73516071735161247351935773519395734983607349903773536752735368410.112000.005090.066091includedK562SF3B4
MXEMRPL48ENSG00000175581.9chr11+73516071735161247351935773519395735003797350053573536752735368410.150000.000270.008461includedK562PRPF8
MXEMRPL48ENSG00000175581.9chr11+73519357735193957353675273536841735160717351612473555851735560210.152000.000480.014011includedK562SUPV3L1
MXEMRPL48ENSG00000175581.9chr11+73516071735161247351935773519395734983607349903773536752735368410.138000.001620.035291includedK562SUPV3L1

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for MRPL48 is not avaliable on ENCORE database.